RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 ZNF525Q8N782 197 aa10.94□□□□□ -0.66
UBE3A-228ENST00000638155 YBX2Q9Y2T7 364 aaKnown RBP10.94□□□□□ -0.66
UBE3A-228ENST00000638155 PRSS22Q9GZN4 317 aa10.94□□□□□ -0.66
UBE3A-228ENST00000638155 DTX4Q9Y2E6 619 aa10.94□□□□□ -0.66
UBE3A-228ENST00000638155 SAA2-SAA4A0A096LPE2 208 aa10.94□□□□□ -0.66
UBE3A-228ENST00000638155 SAA2P0DJI9 122 aaPredicted RBP10.94□□□□□ -0.66
UBE3A-228ENST00000638155 UCP1P25874 307 aa10.94□□□□□ -0.66
UBE3A-228ENST00000638155 BOD1L2Q8IYS8 172 aa10.94□□□□□ -0.66
UBE3A-228ENST00000638155 C7orf69Q9H7B7 122 aa10.94□□□□□ -0.66
UBE3A-228ENST00000638155 CXCL10P02778 98 aa10.93□□□□□ -0.66
UBE3A-228ENST00000638155 TMEM92Q6UXU6 159 aa10.93□□□□□ -0.66
UBE3A-228ENST00000638155 TSSC4Q9Y5U2 329 aaPredicted RBP10.93□□□□□ -0.66
UBE3A-228ENST00000638155 PYYP10082 97 aa10.93□□□□□ -0.66
UBE3A-228ENST00000638155 NOVP48745 357 aa10.93□□□□□ -0.66
UBE3A-228ENST00000638155 FAM90A1Q86YD7 464 aa10.93□□□□□ -0.66
UBE3A-228ENST00000638155 ARID2Q68CP9 1835 aa10.93□□□□□ -0.66
UBE3A-228ENST00000638155 IGKV2-40A0A087WW87 121 aaPredicted RBP10.93□□□□□ -0.66
UBE3A-228ENST00000638155 IGKV2D-40P01614 121 aaPredicted RBP10.93□□□□□ -0.66
UBE3A-228ENST00000638155 OCC1Q8TAD7 63 aa10.93□□□□□ -0.66
UBE3A-228ENST00000638155 NEU4Q8WWR8 484 aaPredicted RBP10.93□□□□□ -0.66
UBE3A-228ENST00000638155 WFDC12Q8WWY7 111 aa10.93□□□□□ -0.66
UBE3A-228ENST00000638155 SPATA25Q9BR10 227 aa10.93□□□□□ -0.66
UBE3A-228ENST00000638155 EFNB3Q15768 340 aa10.93□□□□□ -0.66
UBE3A-228ENST00000638155 SRRM4A7MD48 611 aaKnown RBP10.93□□□□□ -0.66
UBE3A-228ENST00000638155 PILRAQ9UKJ1 303 aa10.93□□□□□ -0.66
UBE3A-228ENST00000638155 ZNF831Q5JPB2 1677 aa10.93□□□□□ -0.66
UBE3A-228ENST00000638155 KIAA1551Q9HCM1 1747 aa10.92□□□□□ -0.66
UBE3A-228ENST00000638155 MORN5Q5VZ52 161 aa10.92□□□□□ -0.66
UBE3A-228ENST00000638155 C8orf31Q8N9H6 132 aa10.92□□□□□ -0.66
UBE3A-228ENST00000638155 PLA2G2FQ9BZM2 168 aa10.92□□□□□ -0.66
UBE3A-228ENST00000638155 MED12LQ86YW9 2145 aa10.92□□□□□ -0.66
UBE3A-228ENST00000638155 SAP30O75446 220 aa10.92□□□□□ -0.66
UBE3A-228ENST00000638155 TMEM158Q8WZ71 300 aa10.92□□□□□ -0.66
UBE3A-228ENST00000638155 TMEM243Q9BU79 118 aa10.92□□□□□ -0.66
UBE3A-228ENST00000638155 TRPM3Q9HCF6 1732 aaPredicted RBP10.92□□□□□ -0.66
UBE3A-228ENST00000638155 GAGE7O76087 117 aa10.92□□□□□ -0.66
UBE3A-228ENST00000638155 GAGE12FP0CL80 117 aa10.92□□□□□ -0.66
UBE3A-228ENST00000638155 GAGE12GP0CL81 117 aa10.92□□□□□ -0.66
UBE3A-228ENST00000638155 GAGE12IP0CL82 117 aa10.92□□□□□ -0.66
UBE3A-228ENST00000638155 MBNL3Q9NUK0 354 aaKnown RBP10.92□□□□□ -0.66
UBE3A-228ENST00000638155 RAMP3O60896 148 aa10.92□□□□□ -0.66
UBE3A-228ENST00000638155 FOXG1P55316 489 aaPredicted RBP10.92□□□□□ -0.66
UBE3A-228ENST00000638155 C12orf77C9JDV5 145 aa10.92□□□□□ -0.66
UBE3A-228ENST00000638155 ATRAIDQ6UW56 229 aa10.91□□□□□ -0.66
UBE3A-228ENST00000638155 MUC4Q99102 2169 aa10.91□□□□□ -0.66
UBE3A-228ENST00000638155 IGLV1-36A0A0B4J1U3 117 aa10.91□□□□□ -0.66
UBE3A-228ENST00000638155 BSPH1Q075Z2 132 aa10.91□□□□□ -0.66
UBE3A-228ENST00000638155 C1QTNF4Q9BXJ3 329 aa10.91□□□□□ -0.66
UBE3A-228ENST00000638155 HELZP42694 1942 aaKnown RBP10.91□□□□□ -0.66
UBE3A-228ENST00000638155 SBF2Q86WG5 1849 aa10.91□□□□□ -0.66
UBE3A-228ENST00000638155 CRYBA2P53672 197 aa10.91□□□□□ -0.66
UBE3A-228ENST00000638155 GAS1P54826 345 aa10.91□□□□□ -0.66
UBE3A-228ENST00000638155 J3KT08 172 aa10.91□□□□□ -0.66
UBE3A-228ENST00000638155 WNT2P09544 360 aa10.91□□□□□ -0.66
UBE3A-228ENST00000638155 ANXA2RQ3ZCQ2 193 aa10.91□□□□□ -0.66
UBE3A-228ENST00000638155 C8orf82Q6P1X6 216 aaPredicted RBP10.91□□□□□ -0.66
UBE3A-228ENST00000638155 Q6ZT83 130 aa10.91□□□□□ -0.66
UBE3A-228ENST00000638155 SYNJ2BPP57105 145 aa10.91□□□□□ -0.66
UBE3A-228ENST00000638155 C18orf12Q96KH6 178 aa10.91□□□□□ -0.66
UBE3A-228ENST00000638155 SCRT2Q9NQ03 307 aa10.91□□□□□ -0.66
UBE3A-228ENST00000638155 TMEM14DPA8MWL7 114 aa10.91□□□□□ -0.66
UBE3A-228ENST00000638155 CGB3P0DN86 165 aa10.91□□□□□ -0.66
UBE3A-228ENST00000638155 DEPPQ9NTK1 212 aa10.91□□□□□ -0.66
UBE3A-228ENST00000638155 TM2D1Q9BX74 207 aa10.91□□□□□ -0.66
UBE3A-228ENST00000638155 SIGLEC1Q9BZZ2 1709 aa10.9□□□□□ -0.66
UBE3A-228ENST00000638155 IGFBP3P17936 291 aaPredicted RBP10.9□□□□□ -0.66
UBE3A-228ENST00000638155 CISD3P0C7P0 127 aa10.9□□□□□ -0.66
UBE3A-228ENST00000638155 CGB7P0DN87 165 aa10.9□□□□□ -0.66
UBE3A-228ENST00000638155 TRAV13-2A0A0B4J235 113 aa10.9□□□□□ -0.66
UBE3A-228ENST00000638155 RTBDNQ9BSG5 229 aaPredicted RBP10.9□□□□□ -0.66
UBE3A-228ENST00000638155 PRB1P04280 392 aa10.9□□□□□ -0.66
UBE3A-228ENST00000638155 LY75O60449 1722 aa10.9□□□□□ -0.66
UBE3A-228ENST00000638155 GAGE12HA6NDE8 117 aa10.9□□□□□ -0.66
UBE3A-228ENST00000638155 C9orf118A6NHY6 69 aa10.9□□□□□ -0.66
UBE3A-228ENST00000638155 MP68P56378 58 aa10.9□□□□□ -0.66
UBE3A-228ENST00000638155 LYZL1Q6UWQ5 148 aa10.9□□□□□ -0.66
UBE3A-228ENST00000638155 SS18L2Q9UHA2 77 aa10.9□□□□□ -0.66
UBE3A-228ENST00000638155 FXYD7P58549 80 aa10.9□□□□□ -0.66
UBE3A-228ENST00000638155 MRPL55Q7Z7F7 128 aaKnown RBP10.9□□□□□ -0.66
UBE3A-228ENST00000638155 AZU1P20160 251 aa10.9□□□□□ -0.67
UBE3A-228ENST00000638155 SRXN1Q9BYN0 137 aa10.9□□□□□ -0.67
UBE3A-228ENST00000638155 MRPL27Q9P0M9 148 aaKnown RBP10.89□□□□□ -0.67
UBE3A-228ENST00000638155 BRCA1P38398 1863 aaKnown RBP10.89□□□□□ -0.67
UBE3A-228ENST00000638155 CD200R1LQ6Q8B3 271 aa10.89□□□□□ -0.67
UBE3A-228ENST00000638155 MDS2Q8NDY4 140 aa10.89□□□□□ -0.67
UBE3A-228ENST00000638155 DEFB104AQ8WTQ1 72 aa10.89□□□□□ -0.67
UBE3A-228ENST00000638155 NHSQ6T4R5 1651 aa10.89□□□□□ -0.67
UBE3A-228ENST00000638155 NUP35Q8NFH5 326 aa10.89□□□□□ -0.67
UBE3A-228ENST00000638155 AMELYQ99218 206 aa10.89□□□□□ -0.67
UBE3A-228ENST00000638155 FAM231BA6NCW3 169 aa10.89□□□□□ -0.67
UBE3A-228ENST00000638155 ZC2HC1BQ5TFG8 222 aa10.89□□□□□ -0.67
UBE3A-228ENST00000638155 KNCNA6PVL3 124 aa10.89□□□□□ -0.67
UBE3A-228ENST00000638155 C22orf46C9J442 243 aa10.89□□□□□ -0.67
UBE3A-228ENST00000638155 DSCAML1Q8TD84 2053 aa10.89□□□□□ -0.67
UBE3A-228ENST00000638155 PRCDQ00LT1 54 aa10.88□□□□□ -0.67
UBE3A-228ENST00000638155 SPSB3Q6PJ21 355 aa10.88□□□□□ -0.67
UBE3A-228ENST00000638155 IGHV3-53P01767 116 aa10.88□□□□□ -0.67
UBE3A-228ENST00000638155 RPL35AP18077 110 aaKnown RBP10.88□□□□□ -0.67
UBE3A-228ENST00000638155 LINC01465Q8N7H1 131 aa10.88□□□□□ -0.67
UBE3A-228ENST00000638155 C14orf132Q9NPU4 83 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms