RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 U3KQA8 63 aa12.96□□□□□ -0.33
CLN5-218ENST00000637397 A0A1B0GWB2 263 aa12.96□□□□□ -0.33
CLN5-218ENST00000637397 LGALS3P17931 250 aaKnown RBP12.96□□□□□ -0.33
CLN5-218ENST00000637397 EBLN2Q6P2I7 272 aa12.96□□□□□ -0.33
CLN5-218ENST00000637397 H0YJW9 148 aa12.96□□□□□ -0.33
CLN5-218ENST00000637397 TIMM23O14925 209 aa12.96□□□□□ -0.33
CLN5-218ENST00000637397 TMEM170BQ5T4T1 132 aa12.96□□□□□ -0.33
CLN5-218ENST00000637397 SYS1-DBNDD2H3BUS1 97 aa12.96□□□□□ -0.34
CLN5-218ENST00000637397 FXYD7P58549 80 aa12.96□□□□□ -0.34
CLN5-218ENST00000637397 YPEL3P61236 119 aaPredicted RBP12.96□□□□□ -0.34
CLN5-218ENST00000637397 ERVK11-1P61568 191 aa12.96□□□□□ -0.34
CLN5-218ENST00000637397 SLC25A39Q9BZJ4 359 aaPredicted RBP12.96□□□□□ -0.34
CLN5-218ENST00000637397 CLEC19AQ6UXS0 136 aa12.95□□□□□ -0.34
CLN5-218ENST00000637397 RNASE6Q93091 150 aaKnown RBP12.95□□□□□ -0.34
CLN5-218ENST00000637397 MS4A6AQ9H2W1 248 aa12.95□□□□□ -0.34
CLN5-218ENST00000637397 IGKV3-20P01619 116 aa12.95□□□□□ -0.34
CLN5-218ENST00000637397 UBE2V1Q13404 147 aa12.95□□□□□ -0.34
CLN5-218ENST00000637397 C18orf32Q8TCD1 76 aa12.95□□□□□ -0.34
CLN5-218ENST00000637397 EVI2AP22794 236 aa12.95□□□□□ -0.34
CLN5-218ENST00000637397 VDAC2P45880 294 aaPredicted RBP12.95□□□□□ -0.34
CLN5-218ENST00000637397 GTF3C1Q12789 2109 aa12.95□□□□□ -0.34
CLN5-218ENST00000637397 D6R8Y8 96 aa12.94□□□□□ -0.34
CLN5-218ENST00000637397 OR4X2Q8NGF9 303 aa12.94□□□□□ -0.34
CLN5-218ENST00000637397 GAFA1Q96PS6 74 aa12.94□□□□□ -0.34
CLN5-218ENST00000637397 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.94□□□□□ -0.34
CLN5-218ENST00000637397 NCR2O95944 276 aa12.94□□□□□ -0.34
CLN5-218ENST00000637397 NPSP0C0P6 89 aa12.94□□□□□ -0.34
CLN5-218ENST00000637397 FAM159AQ6UWV7 190 aa12.94□□□□□ -0.34
CLN5-218ENST00000637397 MRPL52Q86TS9 123 aaKnown RBP12.94□□□□□ -0.34
CLN5-218ENST00000637397 FREM1Q5H8C1 2179 aa12.94□□□□□ -0.34
CLN5-218ENST00000637397 APOMO95445 188 aa12.94□□□□□ -0.34
CLN5-218ENST00000637397 RIPPLY3P57055 190 aa12.94□□□□□ -0.34
CLN5-218ENST00000637397 SEC11AP67812 179 aa12.94□□□□□ -0.34
CLN5-218ENST00000637397 SFTA2Q6UW10 78 aa12.94□□□□□ -0.34
CLN5-218ENST00000637397 ZNF418Q8TF45 676 aaPredicted RBP12.94□□□□□ -0.34
CLN5-218ENST00000637397 TRGV3P03979 118 aa12.93□□□□□ -0.34
CLN5-218ENST00000637397 Q6ZR03 302 aa12.93□□□□□ -0.34
CLN5-218ENST00000637397 SYT8Q8NBV8 401 aa12.93□□□□□ -0.34
CLN5-218ENST00000637397 WNT2P09544 360 aa12.93□□□□□ -0.34
CLN5-218ENST00000637397 COX6CP09669 75 aa12.93□□□□□ -0.34
CLN5-218ENST00000637397 ZNF56Q15929 161 aa12.93□□□□□ -0.34
CLN5-218ENST00000637397 TRGV9Q99603 122 aa12.93□□□□□ -0.34
CLN5-218ENST00000637397 GUSBP1Q15486 140 aa12.93□□□□□ -0.34
CLN5-218ENST00000637397 KLF17Q5JT82 389 aaPredicted RBP12.93□□□□□ -0.34
CLN5-218ENST00000637397 ZNF329Q86UD4 541 aa12.93□□□□□ -0.34
CLN5-218ENST00000637397 TMEM14BQ9NUH8 114 aa12.93□□□□□ -0.34
CLN5-218ENST00000637397 BEX4Q9NWD9 120 aaPredicted RBP12.93□□□□□ -0.34
CLN5-218ENST00000637397 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.93□□□□□ -0.34
CLN5-218ENST00000637397 SH2D7A6NKC9 451 aaPredicted RBP12.93□□□□□ -0.34
CLN5-218ENST00000637397 IGHV1-8P0DP01 117 aa12.93□□□□□ -0.34
CLN5-218ENST00000637397 PSMG4Q5JS54 123 aa12.93□□□□□ -0.34
CLN5-218ENST00000637397 FAM71F2Q6NXP2 309 aa12.93□□□□□ -0.34
CLN5-218ENST00000637397 Q8NFD4 153 aa12.93□□□□□ -0.34
CLN5-218ENST00000637397 TMPRSS3P57727 454 aa12.92□□□□□ -0.34
CLN5-218ENST00000637397 V9GYV3 84 aa12.92□□□□□ -0.34
CLN5-218ENST00000637397 GGTLC3B5MD39 225 aa12.92□□□□□ -0.34
CLN5-218ENST00000637397 FNDC10F2Z333 226 aa12.92□□□□□ -0.34
CLN5-218ENST00000637397 ASCL2Q99929 193 aa12.92□□□□□ -0.34
CLN5-218ENST00000637397 IGKV2-40A0A087WW87 121 aaPredicted RBP12.92□□□□□ -0.34
CLN5-218ENST00000637397 IGKV2D-40P01614 121 aaPredicted RBP12.92□□□□□ -0.34
CLN5-218ENST00000637397 IGHV2-26A0A0B4J1V2 119 aa12.92□□□□□ -0.34
CLN5-218ENST00000637397 ASIPP42127 132 aa12.92□□□□□ -0.34
CLN5-218ENST00000637397 SRSF6Q13247 344 aaKnown RBP12.92□□□□□ -0.34
CLN5-218ENST00000637397 LYZL1Q6UWQ5 148 aa12.92□□□□□ -0.34
CLN5-218ENST00000637397 ARHGAP21Q5T5U3 1957 aa12.91□□□□□ -0.34
CLN5-218ENST00000637397 IGLC2P0DOY2 106 aa12.91□□□□□ -0.34
CLN5-218ENST00000637397 IGLC3P0DOY3 106 aa12.91□□□□□ -0.34
CLN5-218ENST00000637397 NXT2Q9NPJ8 142 aaKnown RBP12.91□□□□□ -0.34
CLN5-218ENST00000637397 TTC28Q96AY4 2481 aa12.91□□□□□ -0.34
CLN5-218ENST00000637397 PPBPP02775 128 aa12.91□□□□□ -0.34
CLN5-218ENST00000637397 SFTPCP11686 197 aa12.91□□□□□ -0.34
CLN5-218ENST00000637397 FAM106AQ4KMX7 169 aa12.91□□□□□ -0.34
CLN5-218ENST00000637397 FGF23Q9GZV9 251 aaPredicted RBP12.91□□□□□ -0.34
CLN5-218ENST00000637397 A0A1B0GWJ7 208 aa12.91□□□□□ -0.34
CLN5-218ENST00000637397 SNCGO76070 127 aa12.91□□□□□ -0.34
CLN5-218ENST00000637397 DPM2O94777 84 aa12.91□□□□□ -0.34
CLN5-218ENST00000637397 TMEM178BH3BS89 294 aa12.9□□□□□ -0.34
CLN5-218ENST00000637397 HSD52Q0P140 79 aa12.9□□□□□ -0.34
CLN5-218ENST00000637397 SLAQ13239 276 aa12.9□□□□□ -0.34
CLN5-218ENST00000637397 ASPHD1Q5U4P2 390 aa12.9□□□□□ -0.34
CLN5-218ENST00000637397 MALRD1Q5VYJ5 2156 aa12.9□□□□□ -0.34
CLN5-218ENST00000637397 UNQ6494/PRO21346Q6UXR6 183 aa12.9□□□□□ -0.35
CLN5-218ENST00000637397 VKORC1Q9BQB6 163 aa12.9□□□□□ -0.35
CLN5-218ENST00000637397 MRPS16Q9Y3D3 137 aaKnown RBP12.9□□□□□ -0.35
CLN5-218ENST00000637397 COX11Q9Y6N1 276 aa12.9□□□□□ -0.35
CLN5-218ENST00000637397 IGHV1-3A0A0C4DH29 117 aa12.89□□□□□ -0.35
CLN5-218ENST00000637397 NPIPB6E9PJ23 425 aa12.89□□□□□ -0.35
CLN5-218ENST00000637397 TGFAP01135 160 aa12.89□□□□□ -0.35
CLN5-218ENST00000637397 TNFRSF14Q92956 283 aa12.89□□□□□ -0.35
CLN5-218ENST00000637397 PLCE1Q9P212 2302 aa12.89□□□□□ -0.35
CLN5-218ENST00000637397 ZNF134P52741 427 aa12.89□□□□□ -0.35
CLN5-218ENST00000637397 CLEC2AQ6UVW9 174 aa12.89□□□□□ -0.35
CLN5-218ENST00000637397 ZNF474Q6S9Z5 364 aaPredicted RBP12.89□□□□□ -0.35
CLN5-218ENST00000637397 DYNLRB2Q8TF09 96 aa12.89□□□□□ -0.35
CLN5-218ENST00000637397 F2Z2F3 143 aa12.89□□□□□ -0.35
CLN5-218ENST00000637397 TOMM40O96008 361 aa12.89□□□□□ -0.35
CLN5-218ENST00000637397 RPL15P61313 204 aaKnown RBP12.89□□□□□ -0.35
CLN5-218ENST00000637397 WDR87Q6ZQQ6 2873 aa12.89□□□□□ -0.35
CLN5-218ENST00000637397 A0A1W2PPI3 338 aa12.88□□□□□ -0.35
CLN5-218ENST00000637397 IGHG3P01860 377 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms