RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 ORM2P19652 201 aa10.09□□□□□ -0.79
PNKP-228ENST00000637325 GATA2P23769 480 aaPredicted RBP10.09□□□□□ -0.79
PNKP-228ENST00000637325 RRAS2P62070 204 aaPredicted RBP10.09□□□□□ -0.79
PNKP-228ENST00000637325 MZT2BQ6NZ67 158 aa10.09□□□□□ -0.79
PNKP-228ENST00000637325 LINC00299Q6ZSB3 139 aa10.09□□□□□ -0.79
PNKP-228ENST00000637325 OR1B1Q8NGR6 318 aa10.09□□□□□ -0.79
PNKP-228ENST00000637325 TMEM147Q9BVK8 224 aa10.09□□□□□ -0.79
PNKP-228ENST00000637325 SLC25A22Q9H936 323 aa10.09□□□□□ -0.79
PNKP-228ENST00000637325 NUDT15Q9NV35 164 aa10.09□□□□□ -0.79
PNKP-228ENST00000637325 PLECQ15149 4684 aaKnown RBP10.09□□□□□ -0.79
PNKP-228ENST00000637325 ALMS1Q8TCU4 4167 aa10.09□□□□□ -0.79
PNKP-228ENST00000637325 C5orf51A6NDU8 294 aa10.08□□□□□ -0.8
PNKP-228ENST00000637325 L7N2F9 121 aa10.08□□□□□ -0.8
PNKP-228ENST00000637325 CCSO14618 274 aa10.08□□□□□ -0.8
PNKP-228ENST00000637325 IL5P05113 134 aa10.08□□□□□ -0.8
PNKP-228ENST00000637325 GALR1P47211 349 aa10.08□□□□□ -0.8
PNKP-228ENST00000637325 TAS2R30P59541 319 aa10.08□□□□□ -0.8
PNKP-228ENST00000637325 NUTF2P61970 127 aaKnown RBP10.08□□□□□ -0.8
PNKP-228ENST00000637325 VAMP2P63027 116 aa10.08□□□□□ -0.8
PNKP-228ENST00000637325 CYP2G1PQ6ZSU1 146 aa10.08□□□□□ -0.8
PNKP-228ENST00000637325 OR10P1Q8NGE3 313 aa10.08□□□□□ -0.8
PNKP-228ENST00000637325 ZNF431Q8TF32 576 aaPredicted RBP10.08□□□□□ -0.8
PNKP-228ENST00000637325 SEC22CQ9BRL7 303 aa10.08□□□□□ -0.8
PNKP-228ENST00000637325 MGAT4CQ9UBM8 478 aa10.08□□□□□ -0.8
PNKP-228ENST00000637325 SLC45A2Q9UMX9 530 aa10.08□□□□□ -0.8
PNKP-228ENST00000637325 KLK5Q9Y337 293 aaPredicted RBP10.08□□□□□ -0.8
PNKP-228ENST00000637325 DNAH1Q9P2D7 4330 aa10.08□□□□□ -0.8
PNKP-228ENST00000637325 DEFB4AO15263 64 aa10.07□□□□□ -0.8
PNKP-228ENST00000637325 TSC22D2O75157 780 aa10.07□□□□□ -0.8
PNKP-228ENST00000637325 GIG44P09565 113 aaPredicted RBP10.07□□□□□ -0.8
PNKP-228ENST00000637325 C4BPBP20851 252 aa10.07□□□□□ -0.8
PNKP-228ENST00000637325 PAX9P55771 341 aa10.07□□□□□ -0.8
PNKP-228ENST00000637325 DLK1P80370 383 aa10.07□□□□□ -0.8
PNKP-228ENST00000637325 SAMD13Q5VXD3 122 aa10.07□□□□□ -0.8
PNKP-228ENST00000637325 CEMP1Q6PRD7 247 aaPredicted RBP10.07□□□□□ -0.8
PNKP-228ENST00000637325 TMEM14EPQ6UXP3 125 aa10.07□□□□□ -0.8
PNKP-228ENST00000637325 C12orf45Q8N5I9 185 aaPredicted RBP10.07□□□□□ -0.8
PNKP-228ENST00000637325 C11orf45Q8TAV5 145 aa10.07□□□□□ -0.8
PNKP-228ENST00000637325 WDR12Q9GZL7 423 aaKnown RBP10.07□□□□□ -0.8
PNKP-228ENST00000637325 C11orf68Q9H3H3 251 aaKnown RBP10.07□□□□□ -0.8
PNKP-228ENST00000637325 NPVFQ9HCQ7 196 aa10.07□□□□□ -0.8
PNKP-228ENST00000637325 CLEC5AQ9NY25 188 aa10.07□□□□□ -0.8
PNKP-228ENST00000637325 RCL1Q9Y2P8 373 aaKnown RBP10.07□□□□□ -0.8
PNKP-228ENST00000637325 ZNF98A6NK75 572 aa10.06□□□□□ -0.8
PNKP-228ENST00000637325 PMS2P5A8MQ11 134 aa10.06□□□□□ -0.8
PNKP-228ENST00000637325 H3BMM0 161 aa10.06□□□□□ -0.8
PNKP-228ENST00000637325 CCNKO75909 580 aa10.06□□□□□ -0.8
PNKP-228ENST00000637325 MBPP02686 304 aaPredicted RBP10.06□□□□□ -0.8
PNKP-228ENST00000637325 PSMB3P49720 205 aa10.06□□□□□ -0.8
PNKP-228ENST00000637325 MEOX2P50222 304 aa10.06□□□□□ -0.8
PNKP-228ENST00000637325 BCAP31P51572 246 aa10.06□□□□□ -0.8
PNKP-228ENST00000637325 RAP2BP61225 183 aa10.06□□□□□ -0.8
PNKP-228ENST00000637325 TMEM182Q6ZP80 229 aaPredicted RBP10.06□□□□□ -0.8
PNKP-228ENST00000637325 C16orf92Q96LL3 132 aa10.06□□□□□ -0.8
PNKP-228ENST00000637325 RSG1Q9BU20 258 aa10.06□□□□□ -0.8
PNKP-228ENST00000637325 C1QTNF4Q9BXJ3 329 aa10.06□□□□□ -0.8
PNKP-228ENST00000637325 MFFQ9GZY8 342 aa10.06□□□□□ -0.8
PNKP-228ENST00000637325 DOK5Q9P104 306 aa10.06□□□□□ -0.8
PNKP-228ENST00000637325 LSM5Q9Y4Y9 91 aaKnown RBP10.06□□□□□ -0.8
PNKP-228ENST00000637325 ISLRO14498 428 aa10.05□□□□□ -0.8
PNKP-228ENST00000637325 HYPMO75409 117 aa10.05□□□□□ -0.8
PNKP-228ENST00000637325 OR5G3P0C626 314 aa10.05□□□□□ -0.8
PNKP-228ENST00000637325 HLA-DRB4P13762 266 aa10.05□□□□□ -0.8
PNKP-228ENST00000637325 NANOS2P60321 138 aaKnown RBP10.05□□□□□ -0.8
PNKP-228ENST00000637325 SELENOTP62341 195 aa10.05□□□□□ -0.8
PNKP-228ENST00000637325 S100A7AQ86SG5 101 aa10.05□□□□□ -0.8
PNKP-228ENST00000637325 ENKURQ8TC29 256 aa10.05□□□□□ -0.8
PNKP-228ENST00000637325 PHLDA1Q8WV24 401 aaPredicted RBP10.05□□□□□ -0.8
PNKP-228ENST00000637325 GPR82Q96P67 336 aa10.05□□□□□ -0.8
PNKP-228ENST00000637325 SLC25A32Q9H2D1 315 aa10.05□□□□□ -0.8
PNKP-228ENST00000637325 XCL2Q9UBD3 114 aa10.05□□□□□ -0.8
PNKP-228ENST00000637325 TBC1D24Q9ULP9 559 aa10.05□□□□□ -0.8
PNKP-228ENST00000637325 HIGD1AQ9Y241 93 aa10.05□□□□□ -0.8
PNKP-228ENST00000637325 HLA-DRB4X5D2U9 266 aa10.05□□□□□ -0.8
PNKP-228ENST00000637325 C7orf66A4D0T2 115 aa10.04□□□□□ -0.8
PNKP-228ENST00000637325 A6NHS1 94 aa10.04□□□□□ -0.8
PNKP-228ENST00000637325 FNDC10F2Z333 226 aa10.04□□□□□ -0.8
PNKP-228ENST00000637325 IGKV3-20P01619 116 aa10.04□□□□□ -0.8
PNKP-228ENST00000637325 LINC00869P0C866 280 aa10.04□□□□□ -0.8
PNKP-228ENST00000637325 MIFP14174 115 aa10.04□□□□□ -0.8
PNKP-228ENST00000637325 PVALBP20472 110 aaPredicted RBP10.04□□□□□ -0.8
PNKP-228ENST00000637325 ASAH1Q13510 395 aa10.04□□□□□ -0.8
PNKP-228ENST00000637325 EBLN2Q6P2I7 272 aa10.04□□□□□ -0.8
PNKP-228ENST00000637325 TEPPQ6URK8 271 aa10.04□□□□□ -0.8
PNKP-228ENST00000637325 GSG1LQ6UXU4 331 aa10.04□□□□□ -0.8
PNKP-228ENST00000637325 FOXI2Q6ZQN5 318 aa10.04□□□□□ -0.8
PNKP-228ENST00000637325 C2orf50Q96LR7 162 aa10.04□□□□□ -0.8
PNKP-228ENST00000637325 SAV1Q9H4B6 383 aaPredicted RBP10.04□□□□□ -0.8
PNKP-228ENST00000637325 IGHV4-28A0A0C4DH34 117 aa10.03□□□□□ -0.8
PNKP-228ENST00000637325 K7EPK0 472 aa10.03□□□□□ -0.8
PNKP-228ENST00000637325 SOCS3O14543 225 aa10.03□□□□□ -0.8
PNKP-228ENST00000637325 GOSR2O14653 212 aa10.03□□□□□ -0.8
PNKP-228ENST00000637325 CAV2P51636 162 aa10.03□□□□□ -0.8
PNKP-228ENST00000637325 DEFB1P60022 68 aa10.03□□□□□ -0.8
PNKP-228ENST00000637325 S100A10P60903 97 aa10.03□□□□□ -0.8
PNKP-228ENST00000637325 FGL1Q08830 312 aa10.03□□□□□ -0.8
PNKP-228ENST00000637325 SLC38A11Q08AI6 406 aa10.03□□□□□ -0.8
PNKP-228ENST00000637325 GDF5OSQ5U4N7 250 aa10.03□□□□□ -0.8
PNKP-228ENST00000637325 SPATA31B1PQ5VZV4 182 aa10.03□□□□□ -0.8
PNKP-228ENST00000637325 OR4B1Q8NGF8 309 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms