RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 ZNF138P52744 262 aa9.62□□□□□ -0.87
COL11A1-211ENST00000635193 BSPH1Q075Z2 132 aa9.62□□□□□ -0.87
COL11A1-211ENST00000635193 Q6ZWC4 215 aa9.62□□□□□ -0.87
COL11A1-211ENST00000635193 NBR2O15453 112 aa9.62□□□□□ -0.87
COL11A1-211ENST00000635193 TNFRSF14Q92956 283 aa9.62□□□□□ -0.87
COL11A1-211ENST00000635193 SLC50A1Q9BRV3 221 aa9.62□□□□□ -0.87
COL11A1-211ENST00000635193 IGHV3OR16-10A0A075B7F0 116 aa9.62□□□□□ -0.87
COL11A1-211ENST00000635193 MLNRO43193 412 aa9.62□□□□□ -0.87
COL11A1-211ENST00000635193 CFPP27918 469 aa9.62□□□□□ -0.87
COL11A1-211ENST00000635193 LINC01560Q8TB33 94 aa9.62□□□□□ -0.87
COL11A1-211ENST00000635193 ZNF581Q9P0T4 197 aa9.62□□□□□ -0.87
COL11A1-211ENST00000635193 IGHV3-64A0A075B6Q5 118 aa9.61□□□□□ -0.87
COL11A1-211ENST00000635193 C9orf172C9J069 976 aa9.61□□□□□ -0.87
COL11A1-211ENST00000635193 K7EP34 96 aa9.61□□□□□ -0.87
COL11A1-211ENST00000635193 CDKN1BP46527 198 aa9.61□□□□□ -0.87
COL11A1-211ENST00000635193 FHL1Q13642 323 aa9.61□□□□□ -0.87
COL11A1-211ENST00000635193 PIMREGQ9BSJ6 248 aa9.61□□□□□ -0.87
COL11A1-211ENST00000635193 KLF2Q9Y5W3 355 aaPredicted RBP9.61□□□□□ -0.87
COL11A1-211ENST00000635193 LGALS1P09382 135 aaKnown RBP9.61□□□□□ -0.87
COL11A1-211ENST00000635193 RHOGP84095 191 aa9.61□□□□□ -0.87
COL11A1-211ENST00000635193 TET1Q8NFU7 2136 aa9.61□□□□□ -0.87
COL11A1-211ENST00000635193 GHRHP01286 108 aa9.61□□□□□ -0.87
COL11A1-211ENST00000635193 CACNA1EQ15878 2313 aa9.61□□□□□ -0.87
COL11A1-211ENST00000635193 C9JAW5 83 aa9.61□□□□□ -0.87
COL11A1-211ENST00000635193 E9PQ18 207 aa9.61□□□□□ -0.87
COL11A1-211ENST00000635193 PSPNO60542 156 aa9.61□□□□□ -0.87
COL11A1-211ENST00000635193 TMEM42Q69YG0 159 aa9.61□□□□□ -0.87
COL11A1-211ENST00000635193 A0A0G2JRQ6 117 aa9.6□□□□□ -0.87
COL11A1-211ENST00000635193 PINLYPA6NC86 204 aa9.6□□□□□ -0.87
COL11A1-211ENST00000635193 FOXG1P55316 489 aaPredicted RBP9.6□□□□□ -0.87
COL11A1-211ENST00000635193 LYZL1Q6UWQ5 148 aa9.6□□□□□ -0.87
COL11A1-211ENST00000635193 LHFPL4Q7Z7J7 247 aa9.6□□□□□ -0.87
COL11A1-211ENST00000635193 TMEM133Q9H2Q1 129 aa9.6□□□□□ -0.87
COL11A1-211ENST00000635193 CD28P10747 220 aa9.6□□□□□ -0.87
COL11A1-211ENST00000635193 ETDBQ3ZM63 59 aa9.6□□□□□ -0.87
COL11A1-211ENST00000635193 GGNQ86UU5 652 aa9.6□□□□□ -0.87
COL11A1-211ENST00000635193 STPG4Q8N801 248 aa9.6□□□□□ -0.87
COL11A1-211ENST00000635193 RALGAPA1Q6GYQ0 2036 aa9.6□□□□□ -0.87
COL11A1-211ENST00000635193 NPIPB5A8MRT5 1133 aa9.6□□□□□ -0.87
COL11A1-211ENST00000635193 SP9P0CG40 484 aa9.6□□□□□ -0.87
COL11A1-211ENST00000635193 C18orf32Q8TCD1 76 aa9.6□□□□□ -0.87
COL11A1-211ENST00000635193 TRBV6-6A0A0A6YYG2 114 aa9.6□□□□□ -0.87
COL11A1-211ENST00000635193 GAGE12HA6NDE8 117 aa9.6□□□□□ -0.87
COL11A1-211ENST00000635193 TCRAP04437 139 aa9.6□□□□□ -0.87
COL11A1-211ENST00000635193 NTF4P34130 210 aa9.6□□□□□ -0.87
COL11A1-211ENST00000635193 TMEM190Q8WZ59 177 aa9.6□□□□□ -0.87
COL11A1-211ENST00000635193 SCRT1Q9BWW7 348 aa9.6□□□□□ -0.87
COL11A1-211ENST00000635193 MPDZO75970 2070 aa9.59□□□□□ -0.87
COL11A1-211ENST00000635193 TRAV3A0A0B4J244 114 aa9.59□□□□□ -0.87
COL11A1-211ENST00000635193 F8W1H4 67 aa9.59□□□□□ -0.87
COL11A1-211ENST00000635193 SELLP14151 372 aa9.59□□□□□ -0.87
COL11A1-211ENST00000635193 PRB3Q04118 309 aaPredicted RBP9.59□□□□□ -0.87
COL11A1-211ENST00000635193 Q6ZS49 121 aa9.59□□□□□ -0.87
COL11A1-211ENST00000635193 WDR90Q96KV7 1748 aa9.59□□□□□ -0.87
COL11A1-211ENST00000635193 MMP23AO75900 390 aa9.59□□□□□ -0.87
COL11A1-211ENST00000635193 AZU1P20160 251 aa9.59□□□□□ -0.87
COL11A1-211ENST00000635193 SIP14410 1827 aa9.59□□□□□ -0.87
COL11A1-211ENST00000635193 CFHR1Q03591 330 aa9.59□□□□□ -0.87
COL11A1-211ENST00000635193 A0A0U1RRA0 63 aa9.58□□□□□ -0.88
COL11A1-211ENST00000635193 SLC25A20O43772 301 aa9.58□□□□□ -0.88
COL11A1-211ENST00000635193 GFRA3O60609 400 aa9.58□□□□□ -0.88
COL11A1-211ENST00000635193 Q6ZRM9 215 aa9.58□□□□□ -0.88
COL11A1-211ENST00000635193 PPDPFLQ8WWR9 84 aa9.58□□□□□ -0.88
COL11A1-211ENST00000635193 PLEKHB2Q96CS7 222 aa9.58□□□□□ -0.88
COL11A1-211ENST00000635193 IGHV1-18A0A0C4DH31 117 aa9.58□□□□□ -0.88
COL11A1-211ENST00000635193 CD7P09564 240 aa9.58□□□□□ -0.88
COL11A1-211ENST00000635193 C10orf55Q5SWW7 151 aa9.58□□□□□ -0.88
COL11A1-211ENST00000635193 SLC25A39Q9BZJ4 359 aaPredicted RBP9.58□□□□□ -0.88
COL11A1-211ENST00000635193 IGHV2-26A0A0B4J1V2 119 aa9.58□□□□□ -0.88
COL11A1-211ENST00000635193 PRB4P10163 310 aaPredicted RBP9.58□□□□□ -0.88
COL11A1-211ENST00000635193 C15orf62A8K5M9 175 aa9.58□□□□□ -0.88
COL11A1-211ENST00000635193 EXOC3-AS1Q8N2X6 119 aa9.58□□□□□ -0.88
COL11A1-211ENST00000635193 TMEM158Q8WZ71 300 aa9.58□□□□□ -0.88
COL11A1-211ENST00000635193 DUX3Q96PT4 197 aa9.58□□□□□ -0.88
COL11A1-211ENST00000635193 LINC00473A8K010 186 aa9.57□□□□□ -0.88
COL11A1-211ENST00000635193 SRRM5B3KS81 715 aa9.57□□□□□ -0.88
COL11A1-211ENST00000635193 COX6B1P14854 86 aa9.57□□□□□ -0.88
COL11A1-211ENST00000635193 IGLL1P15814 213 aa9.57□□□□□ -0.88
COL11A1-211ENST00000635193 PDLIM4P50479 330 aa9.57□□□□□ -0.88
COL11A1-211ENST00000635193 MORN3Q6PF18 240 aaPredicted RBP9.57□□□□□ -0.88
COL11A1-211ENST00000635193 TEX43Q6ZNM6 134 aa9.57□□□□□ -0.88
COL11A1-211ENST00000635193 LCNL1Q6ZST4 164 aa9.57□□□□□ -0.88
COL11A1-211ENST00000635193 RPUSD1Q9UJJ7 312 aaKnown RBP9.57□□□□□ -0.88
COL11A1-211ENST00000635193 PMS2P5A8MQ11 134 aa9.57□□□□□ -0.88
COL11A1-211ENST00000635193 NPC2P61916 151 aa9.57□□□□□ -0.88
COL11A1-211ENST00000635193 TRAV8-3A0A0A6YYJ7 113 aa9.57□□□□□ -0.88
COL11A1-211ENST00000635193 PRR19A6NJB7 356 aa9.57□□□□□ -0.88
COL11A1-211ENST00000635193 S100A7L2Q5SY68 101 aa9.57□□□□□ -0.88
COL11A1-211ENST00000635193 CDPF1Q6NVV7 123 aa9.57□□□□□ -0.88
COL11A1-211ENST00000635193 LTBP1Q14766 1721 aa9.57□□□□□ -0.88
COL11A1-211ENST00000635193 SLAQ13239 276 aa9.56□□□□□ -0.88
COL11A1-211ENST00000635193 Q6P435 159 aa9.56□□□□□ -0.88
COL11A1-211ENST00000635193 FAM57AQ8TBR7 257 aa9.56□□□□□ -0.88
COL11A1-211ENST00000635193 ZNF883P0CG24 379 aa9.56□□□□□ -0.88
COL11A1-211ENST00000635193 YPEL3P61236 119 aaPredicted RBP9.56□□□□□ -0.88
COL11A1-211ENST00000635193 GLMPQ8WWB7 406 aa9.56□□□□□ -0.88
COL11A1-211ENST00000635193 SPRR3Q9UBC9 169 aa9.56□□□□□ -0.88
COL11A1-211ENST00000635193 CFAP161Q6P656 301 aa9.56□□□□□ -0.88
COL11A1-211ENST00000635193 CENPVQ7Z7K6 275 aaPredicted RBP9.56□□□□□ -0.88
COL11A1-211ENST00000635193 IFITM1P13164 125 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms