RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 PSMB3P49720 205 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 RAB9AP51151 201 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 HIST1H2BDP58876 126 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 HIST1H2BCP62807 126 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 HIST2H2BEQ16778 126 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.25□□□□□ -0.61
LINC00339-208ENST00000634934 HIST1H2BHQ93079 126 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 ANAPC16Q96DE5 110 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 HIST1H2BNQ99877 126 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 HIST1H2BMQ99879 126 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 SRD5A3Q9H8P0 318 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 NIT2Q9NQR4 276 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 THYN1Q9P016 225 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 IGHV3-21A0A0B4J1V1 117 aa11.24□□□□□ -0.61
LINC00339-208ENST00000634934 NDUFB8O95169 186 aa11.24□□□□□ -0.61
LINC00339-208ENST00000634934 RPLP1P05386 114 aaKnown RBP11.24□□□□□ -0.61
LINC00339-208ENST00000634934 S100A2P29034 98 aa11.24□□□□□ -0.61
LINC00339-208ENST00000634934 ATP5IP56385 69 aaPredicted RBP11.24□□□□□ -0.61
LINC00339-208ENST00000634934 TMEM241Q24JQ0 296 aa11.24□□□□□ -0.61
LINC00339-208ENST00000634934 ZNF674Q2M3X9 581 aa11.24□□□□□ -0.61
LINC00339-208ENST00000634934 KHDC1LQ5JSQ8 128 aa11.24□□□□□ -0.61
LINC00339-208ENST00000634934 HIST2H2BDQ6DRA6 164 aa11.24□□□□□ -0.61
LINC00339-208ENST00000634934 LCN15Q6UWW0 184 aa11.24□□□□□ -0.61
LINC00339-208ENST00000634934 NECAP1Q8NC96 275 aa11.24□□□□□ -0.61
LINC00339-208ENST00000634934 WIPF2Q8TF74 440 aaPredicted RBP11.24□□□□□ -0.61
LINC00339-208ENST00000634934 VSIRQ9H7M9 311 aa11.24□□□□□ -0.61
LINC00339-208ENST00000634934 TRBV9A0A0B4J1U6 114 aa11.23□□□□□ -0.61
LINC00339-208ENST00000634934 ZFP92A6NM28 416 aa11.23□□□□□ -0.61
LINC00339-208ENST00000634934 ZNF727A8MUV8 499 aa11.23□□□□□ -0.61
LINC00339-208ENST00000634934 TYMSP04818 313 aa11.23□□□□□ -0.61
LINC00339-208ENST00000634934 PFN1P07737 140 aaKnown RBP11.23□□□□□ -0.61
LINC00339-208ENST00000634934 CD28P10747 220 aa11.23□□□□□ -0.61
LINC00339-208ENST00000634934 TCTEX1D4Q5JR98 221 aa11.23□□□□□ -0.61
LINC00339-208ENST00000634934 OR8G2PQ6IF36 304 aa11.23□□□□□ -0.61
LINC00339-208ENST00000634934 SSX7Q7RTT5 188 aa11.23□□□□□ -0.61
LINC00339-208ENST00000634934 SLC16A13Q7RTY0 426 aa11.23□□□□□ -0.61
LINC00339-208ENST00000634934 IMMP2LQ96T52 175 aa11.23□□□□□ -0.61
LINC00339-208ENST00000634934 NPCDR1Q9BY65 106 aa11.23□□□□□ -0.61
LINC00339-208ENST00000634934 KCNIP2Q9NS61 270 aa11.23□□□□□ -0.61
LINC00339-208ENST00000634934 WDR83OSQ9Y284 106 aa11.23□□□□□ -0.61
LINC00339-208ENST00000634934 UBE2L5PA0A1B0GUS4 154 aa11.22□□□□□ -0.61
LINC00339-208ENST00000634934 TCRBV4S1A1TA0A5B7 111 aa11.22□□□□□ -0.61
LINC00339-208ENST00000634934 FAM223BA6NKX1 122 aa11.22□□□□□ -0.61
LINC00339-208ENST00000634934 IFITM10A6NMD0 228 aa11.22□□□□□ -0.61
LINC00339-208ENST00000634934 FNDC10F2Z333 226 aa11.22□□□□□ -0.61
LINC00339-208ENST00000634934 CORTO00230 105 aa11.22□□□□□ -0.61
LINC00339-208ENST00000634934 PPP1R2P9O14990 202 aa11.22□□□□□ -0.61
LINC00339-208ENST00000634934 BRI3O95415 125 aa11.22□□□□□ -0.61
LINC00339-208ENST00000634934 MT-CO2P00403 227 aa11.22□□□□□ -0.61
LINC00339-208ENST00000634934 IGHV3-48P01763 117 aa11.22□□□□□ -0.61
LINC00339-208ENST00000634934 OPRK1P41145 380 aa11.22□□□□□ -0.61
LINC00339-208ENST00000634934 ATP5G2Q06055 141 aa11.22□□□□□ -0.61
LINC00339-208ENST00000634934 C15orf32Q32M92 178 aa11.22□□□□□ -0.61
LINC00339-208ENST00000634934 PVRIGQ6DKI7 326 aa11.22□□□□□ -0.61
LINC00339-208ENST00000634934 ACSM6Q6P461 480 aa11.22□□□□□ -0.61
LINC00339-208ENST00000634934 FAM223AQ8IWN6 122 aa11.22□□□□□ -0.61
LINC00339-208ENST00000634934 HIST3H2BBQ8N257 126 aa11.22□□□□□ -0.61
LINC00339-208ENST00000634934 RNASEH2CQ8TDP1 164 aaKnown RBP11.22□□□□□ -0.61
LINC00339-208ENST00000634934 WFDC12Q8WWY7 111 aa11.22□□□□□ -0.61
LINC00339-208ENST00000634934 SMIM7Q9BQ49 75 aa11.22□□□□□ -0.61
LINC00339-208ENST00000634934 S4R3C0 116 aa11.22□□□□□ -0.61
LINC00339-208ENST00000634934 TGIF2-C20orf24A0A0A6YYL0 155 aa11.21□□□□□ -0.61
LINC00339-208ENST00000634934 A0A0G2JLM5 398 aa11.21□□□□□ -0.61
LINC00339-208ENST00000634934 GATCO43716 136 aaKnown RBP11.21□□□□□ -0.61
LINC00339-208ENST00000634934 PDE6DO43924 150 aa11.21□□□□□ -0.61
LINC00339-208ENST00000634934 IGHV3-11P01762 117 aa11.21□□□□□ -0.61
LINC00339-208ENST00000634934 IGHV3-23P01764 117 aa11.21□□□□□ -0.61
LINC00339-208ENST00000634934 KRTAP10-3P60369 221 aa11.21□□□□□ -0.61
LINC00339-208ENST00000634934 KLK9Q2XQG4 91 aa11.21□□□□□ -0.61
LINC00339-208ENST00000634934 ACOT6Q3I5F7 207 aaPredicted RBP11.21□□□□□ -0.61
LINC00339-208ENST00000634934 ZNF343Q6P1L6 599 aa11.21□□□□□ -0.61
LINC00339-208ENST00000634934 RNF152Q8N8N0 203 aa11.21□□□□□ -0.61
LINC00339-208ENST00000634934 ZNF709Q8N972 641 aa11.21□□□□□ -0.61
LINC00339-208ENST00000634934 SPATA3Q8NHX4 192 aa11.21□□□□□ -0.61
LINC00339-208ENST00000634934 USMG5Q96IX5 58 aa11.21□□□□□ -0.61
LINC00339-208ENST00000634934 OR5B12Q96R08 314 aa11.21□□□□□ -0.61
LINC00339-208ENST00000634934 KLK9Q9UKQ9 250 aa11.21□□□□□ -0.61
LINC00339-208ENST00000634934 I3L2K1 104 aa11.2□□□□□ -0.62
LINC00339-208ENST00000634934 K7EIM0 57 aa11.2□□□□□ -0.62
LINC00339-208ENST00000634934 FGF7P21781 194 aa11.2□□□□□ -0.62
LINC00339-208ENST00000634934 MLANAQ16655 118 aa11.2□□□□□ -0.62
LINC00339-208ENST00000634934 C12orf54Q6X4T0 127 aa11.2□□□□□ -0.62
LINC00339-208ENST00000634934 OR10G9Q8NGN4 311 aa11.2□□□□□ -0.62
LINC00339-208ENST00000634934 OR10G7Q8NGN6 311 aa11.2□□□□□ -0.62
LINC00339-208ENST00000634934 CITED2Q99967 270 aaPredicted RBP11.2□□□□□ -0.62
LINC00339-208ENST00000634934 FNDC4Q9H6D8 234 aaPredicted RBP11.2□□□□□ -0.62
LINC00339-208ENST00000634934 ARL2-SNX15V9GYD0 113 aa11.2□□□□□ -0.62
LINC00339-208ENST00000634934 A0A1W2PRX2 142 aa11.19□□□□□ -0.62
LINC00339-208ENST00000634934 LINC00587B1AMM8 73 aa11.19□□□□□ -0.62
LINC00339-208ENST00000634934 F6UZH7 168 aa11.19□□□□□ -0.62
LINC00339-208ENST00000634934 GGCTO75223 188 aaKnown RBP11.19□□□□□ -0.62
LINC00339-208ENST00000634934 FAM3BP58499 235 aaPredicted RBP11.19□□□□□ -0.62
LINC00339-208ENST00000634934 ETFRF1Q6IPR1 90 aa11.19□□□□□ -0.62
LINC00339-208ENST00000634934 ZNF491Q8N8L2 437 aa11.19□□□□□ -0.62
LINC00339-208ENST00000634934 OR51G1Q8NGK1 321 aa11.19□□□□□ -0.62
LINC00339-208ENST00000634934 MYOZ3Q8TDC0 251 aa11.19□□□□□ -0.62
LINC00339-208ENST00000634934 EEF1AKMT3Q96AZ1 226 aa11.19□□□□□ -0.62
LINC00339-208ENST00000634934 ACY3Q96HD9 319 aa11.19□□□□□ -0.62
LINC00339-208ENST00000634934 TRGC2P03986 189 aa11.19□□□□□ -0.62
LINC00339-208ENST00000634934 CEBPGP53567 150 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms