RNA–Protein interactions for RNA: ENST00000631619.1

CCNL1-226, Transcript of cyclin L1, humanhuman

TSL 5

Gene CCNL1, Length 2,457 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-226ENST00000631619 CTSZQ9UBR2 303 aa14.38□□□□□ -0.11
CCNL1-226ENST00000631619 AMMECR1Q9Y4X0 333 aaPredicted RBP14.38□□□□□ -0.11
CCNL1-226ENST00000631619 IGKV1D-37A0A075B6S9 117 aa14.38□□□□□ -0.11
CCNL1-226ENST00000631619 IGHV1-24A0A0C4DH33 117 aa14.38□□□□□ -0.11
CCNL1-226ENST00000631619 GAGE12BA1L429 117 aa14.38□□□□□ -0.11
CCNL1-226ENST00000631619 SH2D7A6NKC9 451 aaPredicted RBP14.38□□□□□ -0.11
CCNL1-226ENST00000631619 PYYP10082 97 aa14.38□□□□□ -0.11
CCNL1-226ENST00000631619 HIST1H1EP10412 219 aaKnown RBP14.38□□□□□ -0.11
CCNL1-226ENST00000631619 PATE2Q6UY27 113 aa14.38□□□□□ -0.11
CCNL1-226ENST00000631619 NPIPB3Q92617 1050 aa14.38□□□□□ -0.11
CCNL1-226ENST00000631619 MRPL36Q9P0J6 103 aaKnown RBP14.38□□□□□ -0.11
CCNL1-226ENST00000631619 POLEQ07864 2286 aa14.38□□□□□ -0.11
CCNL1-226ENST00000631619 OR4A5Q8NH83 315 aa14.37□□□□□ -0.11
CCNL1-226ENST00000631619 VSTM2AQ8TAG5 236 aa14.37□□□□□ -0.11
CCNL1-226ENST00000631619 TMEM186Q96B77 213 aa14.37□□□□□ -0.11
CCNL1-226ENST00000631619 SCRT2Q9NQ03 307 aa14.37□□□□□ -0.11
CCNL1-226ENST00000631619 LEPROTL1O95214 131 aa14.37□□□□□ -0.11
CCNL1-226ENST00000631619 LINC00311Q8N616 119 aa14.37□□□□□ -0.11
CCNL1-226ENST00000631619 SMIM12Q96EX1 92 aa14.37□□□□□ -0.11
CCNL1-226ENST00000631619 TPSG1Q9NRR2 321 aa14.37□□□□□ -0.11
CCNL1-226ENST00000631619 PRRG2O14669 202 aa14.36□□□□□ -0.11
CCNL1-226ENST00000631619 NDUFB3O43676 98 aa14.36□□□□□ -0.11
CCNL1-226ENST00000631619 APC2O95996 2303 aa14.36□□□□□ -0.11
CCNL1-226ENST00000631619 RITA1Q96K30 269 aa14.36□□□□□ -0.11
CCNL1-226ENST00000631619 SPTBN2O15020 2390 aa14.36□□□□□ -0.11
CCNL1-226ENST00000631619 CORTO00230 105 aa14.36□□□□□ -0.11
CCNL1-226ENST00000631619 PEX7O00628 323 aa14.36□□□□□ -0.11
CCNL1-226ENST00000631619 COX7A2P2O60397 106 aa14.36□□□□□ -0.11
CCNL1-226ENST00000631619 LOXP28300 417 aaPredicted RBP14.36□□□□□ -0.11
CCNL1-226ENST00000631619 HIST1H1AQ02539 215 aaPredicted RBP14.36□□□□□ -0.11
CCNL1-226ENST00000631619 LINC00173Q6ZV60 143 aa14.36□□□□□ -0.11
CCNL1-226ENST00000631619 PEF1Q9UBV8 284 aaKnown RBP14.36□□□□□ -0.11
CCNL1-226ENST00000631619 SH3BGRL2Q9UJC5 107 aa14.36□□□□□ -0.11
CCNL1-226ENST00000631619 TCRBV4S1A1TA0A5B7 111 aa14.35□□□□□ -0.11
CCNL1-226ENST00000631619 VWC2LB2RUY7 222 aa14.35□□□□□ -0.11
CCNL1-226ENST00000631619 SLC25A17O43808 307 aa14.35□□□□□ -0.11
CCNL1-226ENST00000631619 FSTL3O95633 263 aa14.35□□□□□ -0.11
CCNL1-226ENST00000631619 DLX6P56179 175 aa14.35□□□□□ -0.11
CCNL1-226ENST00000631619 HBBP68871 147 aa14.35□□□□□ -0.11
CCNL1-226ENST00000631619 MRGPRG-AS1Q2M3A8 158 aa14.35□□□□□ -0.11
CCNL1-226ENST00000631619 C10orf113Q5VZT2 155 aa14.35□□□□□ -0.11
CCNL1-226ENST00000631619 SSX8Q7RTT4 187 aa14.35□□□□□ -0.11
CCNL1-226ENST00000631619 C8orf31Q8N9H6 132 aa14.35□□□□□ -0.11
CCNL1-226ENST00000631619 PAXXQ9BUH6 204 aa14.35□□□□□ -0.11
CCNL1-226ENST00000631619 C7orf69Q9H7B7 122 aa14.35□□□□□ -0.11
CCNL1-226ENST00000631619 ABCA1O95477 2261 aa14.34□□□□□ -0.11
CCNL1-226ENST00000631619 A0A1W2PPI3 338 aa14.34□□□□□ -0.11
CCNL1-226ENST00000631619 RUSC1-AS1Q66K80 236 aa14.34□□□□□ -0.11
CCNL1-226ENST00000631619 ZNF329Q86UD4 541 aa14.34□□□□□ -0.11
CCNL1-226ENST00000631619 THAP8Q8NA92 274 aa14.34□□□□□ -0.11
CCNL1-226ENST00000631619 MS4A6AQ9H2W1 248 aa14.34□□□□□ -0.11
CCNL1-226ENST00000631619 ZNF835Q9Y2P0 537 aa14.34□□□□□ -0.11
CCNL1-226ENST00000631619 TRAV8-6A0A0B4J262 113 aa14.34□□□□□ -0.11
CCNL1-226ENST00000631619 ZNF137PP52743 207 aa14.34□□□□□ -0.11
CCNL1-226ENST00000631619 OR1L4Q8NGR5 311 aa14.34□□□□□ -0.11
CCNL1-226ENST00000631619 RNASE6Q93091 150 aaKnown RBP14.34□□□□□ -0.11
CCNL1-226ENST00000631619 JKAMPQ9P055 326 aa14.34□□□□□ -0.11
CCNL1-226ENST00000631619 MALRD1Q5VYJ5 2156 aa14.34□□□□□ -0.11
CCNL1-226ENST00000631619 SUB1P53999 127 aaKnown RBP eCLIP14.33□□□□□ -0.12
CCNL1-226ENST00000631619 FOXA3P55318 350 aaPredicted RBP14.33□□□□□ -0.12
CCNL1-226ENST00000631619 PET117Q6UWS5 81 aa14.33□□□□□ -0.12
CCNL1-226ENST00000631619 FXYD5Q96DB9 178 aa14.33□□□□□ -0.12
CCNL1-226ENST00000631619 OR5AL1P0C617 328 aa14.33□□□□□ -0.12
CCNL1-226ENST00000631619 IGLC1P0CG04 106 aa14.33□□□□□ -0.12
CCNL1-226ENST00000631619 TMEM155Q4W5P6 130 aa14.33□□□□□ -0.12
CCNL1-226ENST00000631619 ABHD17AQ96GS6 310 aa14.33□□□□□ -0.12
CCNL1-226ENST00000631619 MAP1LC3CQ9BXW4 147 aa14.33□□□□□ -0.12
CCNL1-226ENST00000631619 TMEM238C9JI98 176 aa14.32□□□□□ -0.12
CCNL1-226ENST00000631619 PLAUP00749 431 aa14.32□□□□□ -0.12
CCNL1-226ENST00000631619 LIPFP07098 398 aa14.32□□□□□ -0.12
CCNL1-226ENST00000631619 S100A7P31151 101 aa14.32□□□□□ -0.12
CCNL1-226ENST00000631619 MEGF9Q9H1U4 602 aa14.32□□□□□ -0.12
CCNL1-226ENST00000631619 SOX21Q9Y651 276 aaPredicted RBP14.32□□□□□ -0.12
CCNL1-226ENST00000631619 A0A087X0K7 114 aa14.32□□□□□ -0.12
CCNL1-226ENST00000631619 IGHV3-72A0A0B4J1Y9 119 aa14.32□□□□□ -0.12
CCNL1-226ENST00000631619 VMA21Q3ZAQ7 101 aa14.32□□□□□ -0.12
CCNL1-226ENST00000631619 C22orf46C9J442 243 aa14.31□□□□□ -0.12
CCNL1-226ENST00000631619 IGHV1-8P0DP01 117 aa14.31□□□□□ -0.12
CCNL1-226ENST00000631619 GPR183P32249 361 aa14.31□□□□□ -0.12
CCNL1-226ENST00000631619 LINC00305Q7Z4B0 112 aa14.31□□□□□ -0.12
CCNL1-226ENST00000631619 Q8NA96 180 aa14.31□□□□□ -0.12
CCNL1-226ENST00000631619 KAAG1Q9UBP8 84 aa14.31□□□□□ -0.12
CCNL1-226ENST00000631619 ZNF841Q6ZN19 808 aa14.31□□□□□ -0.12
CCNL1-226ENST00000631619 TCF24Q7RTU0 167 aa14.31□□□□□ -0.12
CCNL1-226ENST00000631619 ASCL5Q7RTU5 278 aa14.31□□□□□ -0.12
CCNL1-226ENST00000631619 TPRP12270 2363 aaKnown RBP14.3□□□□□ -0.12
CCNL1-226ENST00000631619 LOC102724200A0A096LPH7 203 aaPredicted RBP14.3□□□□□ -0.12
CCNL1-226ENST00000631619 MOSP00540 346 aa14.3□□□□□ -0.12
CCNL1-226ENST00000631619 MC5RP33032 325 aa14.3□□□□□ -0.12
CCNL1-226ENST00000631619 MYCNOSP40205 109 aa14.3□□□□□ -0.12
CCNL1-226ENST00000631619 PRR31Q5SQ13 230 aa14.3□□□□□ -0.12
CCNL1-226ENST00000631619 HCP5Q6MZN7 132 aa14.3□□□□□ -0.12
CCNL1-226ENST00000631619 COL25A1Q9BXS0 654 aaPredicted RBP14.3□□□□□ -0.12
CCNL1-226ENST00000631619 C7orf71A4D174 169 aa14.3□□□□□ -0.12
CCNL1-226ENST00000631619 SHISA9B4DS77 424 aa14.3□□□□□ -0.12
CCNL1-226ENST00000631619 DLX1P56177 255 aa14.3□□□□□ -0.12
CCNL1-226ENST00000631619 GFRALQ6UXV0 394 aa14.3□□□□□ -0.12
CCNL1-226ENST00000631619 RPP21Q9H633 154 aaKnown RBP14.3□□□□□ -0.12
CCNL1-226ENST00000631619 E7EQL1 145 aa14.29□□□□□ -0.12
CCNL1-226ENST00000631619 ENSAO43768 121 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms