RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 ATP6V0E1O15342 81 aa15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 GNG7O60262 68 aa15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 NBEAP1P0C6P0 100 aa15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 MYCNOSP40205 109 aa15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 GNG5P63218 68 aa15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 CELSR2Q9HCU4 2923 aa15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 SLC17A3O00476 420 aa15.41■□□□□ 0.06
CHRNA4-209ENST00000627000 COX6B1P14854 86 aa15.41■□□□□ 0.06
CHRNA4-209ENST00000627000 HIST1H1BP16401 226 aaKnown RBP15.41■□□□□ 0.06
CHRNA4-209ENST00000627000 MFAP4P55083 255 aa15.41■□□□□ 0.06
CHRNA4-209ENST00000627000 ECSCRQ19T08 205 aa15.41■□□□□ 0.06
CHRNA4-209ENST00000627000 ZNF491Q8N8L2 437 aa15.41■□□□□ 0.06
CHRNA4-209ENST00000627000 OR10D4PQ8NGN7 298 aa15.41■□□□□ 0.06
CHRNA4-209ENST00000627000 IGF2BP2-AS1Q96M15 143 aa15.41■□□□□ 0.06
CHRNA4-209ENST00000627000 SRD5A3Q9H8P0 318 aa15.41■□□□□ 0.06
CHRNA4-209ENST00000627000 UBR5O95071 2799 aaPredicted RBP15.41■□□□□ 0.06
CHRNA4-209ENST00000627000 TOMM40O96008 361 aa15.41■□□□□ 0.06
CHRNA4-209ENST00000627000 IGLV2-8P01709 118 aa15.41■□□□□ 0.06
CHRNA4-209ENST00000627000 TRGC1P0CF51 173 aa15.41■□□□□ 0.06
CHRNA4-209ENST00000627000 C9orf152Q5JTZ5 239 aa15.41■□□□□ 0.06
CHRNA4-209ENST00000627000 SGMS2Q8NHU3 365 aa15.41■□□□□ 0.06
CHRNA4-209ENST00000627000 TMUB1Q9BVT8 246 aa15.41■□□□□ 0.06
CHRNA4-209ENST00000627000 TRAV34A0A0B4J273 112 aa15.4■□□□□ 0.06
CHRNA4-209ENST00000627000 IFITM10A6NMD0 228 aa15.4■□□□□ 0.06
CHRNA4-209ENST00000627000 MSMBP08118 114 aa15.4■□□□□ 0.06
CHRNA4-209ENST00000627000 Q56UQ5 140 aa15.4■□□□□ 0.06
CHRNA4-209ENST00000627000 KCNIP4Q6PIL6 250 aa15.4■□□□□ 0.06
CHRNA4-209ENST00000627000 UNQ5815/PRO19632Q6UWF5 114 aa15.4■□□□□ 0.06
CHRNA4-209ENST00000627000 BCL6BQ8N143 479 aaPredicted RBP15.4■□□□□ 0.06
CHRNA4-209ENST00000627000 C21orf62Q9NYP8 219 aa15.4■□□□□ 0.06
CHRNA4-209ENST00000627000 PPP5D1E7EU14 171 aa15.39■□□□□ 0.05
CHRNA4-209ENST00000627000 TSTD3H0UI37 97 aa15.39■□□□□ 0.05
CHRNA4-209ENST00000627000 PEX7O00628 323 aa15.39■□□□□ 0.05
CHRNA4-209ENST00000627000 IL4P05112 153 aa15.39■□□□□ 0.05
CHRNA4-209ENST00000627000 HIST3H2BBQ8N257 126 aa15.39■□□□□ 0.05
CHRNA4-209ENST00000627000 NHLRC2Q8NBF2 726 aa15.39■□□□□ 0.05
CHRNA4-209ENST00000627000 PIFOQ8TCI5 191 aa15.39■□□□□ 0.05
CHRNA4-209ENST00000627000 FBN2P35556 2912 aa15.39■□□□□ 0.05
CHRNA4-209ENST00000627000 PGPA6NDG6 321 aa15.39■□□□□ 0.05
CHRNA4-209ENST00000627000 PKIAP61925 76 aa15.39■□□□□ 0.05
CHRNA4-209ENST00000627000 C5orf56Q8N8D9 126 aa15.39■□□□□ 0.05
CHRNA4-209ENST00000627000 RNF125Q96EQ8 232 aa15.39■□□□□ 0.05
CHRNA4-209ENST00000627000 C7orf69Q9H7B7 122 aa15.39■□□□□ 0.05
CHRNA4-209ENST00000627000 FBXL7Q9UJT9 491 aa15.39■□□□□ 0.05
CHRNA4-209ENST00000627000 MAP1AP78559 2803 aaPredicted RBP15.39■□□□□ 0.05
CHRNA4-209ENST00000627000 G3V318 75 aa15.38■□□□□ 0.05
CHRNA4-209ENST00000627000 ERVFC1-1P60608 527 aa15.38■□□□□ 0.05
CHRNA4-209ENST00000627000 RNASE7Q9H1E1 156 aaKnown RBP15.38■□□□□ 0.05
CHRNA4-209ENST00000627000 THYN1Q9P016 225 aa15.38■□□□□ 0.05
CHRNA4-209ENST00000627000 LRRK2Q5S007 2527 aa15.38■□□□□ 0.05
CHRNA4-209ENST00000627000 SLC25A5P05141 298 aaKnown RBP15.38■□□□□ 0.05
CHRNA4-209ENST00000627000 FAM110DQ8TAY7 271 aaPredicted RBP15.38■□□□□ 0.05
CHRNA4-209ENST00000627000 ZNF586Q9NXT0 402 aa15.38■□□□□ 0.05
CHRNA4-209ENST00000627000 CDC42EP3Q9UKI2 254 aa15.38■□□□□ 0.05
CHRNA4-209ENST00000627000 RPH3ALQ9UNE2 315 aa15.38■□□□□ 0.05
CHRNA4-209ENST00000627000 TRAV30A0A087WSZ9 112 aa15.37■□□□□ 0.05
CHRNA4-209ENST00000627000 WI2-2373I1.2A0A1W2PRP0 233 aa15.37■□□□□ 0.05
CHRNA4-209ENST00000627000 OR2T8A6NH00 312 aa15.37■□□□□ 0.05
CHRNA4-209ENST00000627000 H3BRN7 92 aa15.37■□□□□ 0.05
CHRNA4-209ENST00000627000 COL8A1P27658 744 aa15.37■□□□□ 0.05
CHRNA4-209ENST00000627000 CNN1P51911 297 aaKnown RBP15.37■□□□□ 0.05
CHRNA4-209ENST00000627000 YPEL3P61236 119 aaPredicted RBP15.37■□□□□ 0.05
CHRNA4-209ENST00000627000 FOXL1Q12952 345 aa15.37■□□□□ 0.05
CHRNA4-209ENST00000627000 USF2Q15853 346 aaPredicted RBP15.37■□□□□ 0.05
CHRNA4-209ENST00000627000 SGK494Q96LW2 274 aa15.37■□□□□ 0.05
CHRNA4-209ENST00000627000 ZNF48Q96MX3 618 aaPredicted RBP15.37■□□□□ 0.05
CHRNA4-209ENST00000627000 IMMP2LQ96T52 175 aa15.37■□□□□ 0.05
CHRNA4-209ENST00000627000 SHANK2-AS3Q9BTD1 123 aa15.37■□□□□ 0.05
CHRNA4-209ENST00000627000 EPDR1Q9UM22 224 aa15.37■□□□□ 0.05
CHRNA4-209ENST00000627000 ISLRO14498 428 aa15.36■□□□□ 0.05
CHRNA4-209ENST00000627000 GCGP01275 180 aa15.36■□□□□ 0.05
CHRNA4-209ENST00000627000 MGST1P10620 155 aaKnown RBP15.36■□□□□ 0.05
CHRNA4-209ENST00000627000 Q9H3A6 140 aa15.36■□□□□ 0.05
CHRNA4-209ENST00000627000 V9GYV3 84 aa15.36■□□□□ 0.05
CHRNA4-209ENST00000627000 ZNF320A2RRD8 509 aa15.36■□□□□ 0.05
CHRNA4-209ENST00000627000 AVPP01185 164 aa15.36■□□□□ 0.05
CHRNA4-209ENST00000627000 TYMSP04818 313 aa15.36■□□□□ 0.05
CHRNA4-209ENST00000627000 TAS2R60P59551 318 aa15.36■□□□□ 0.05
CHRNA4-209ENST00000627000 HIF1ANQ9NWT6 349 aa15.36■□□□□ 0.05
CHRNA4-209ENST00000627000 TMEM14CQ9P0S9 112 aa15.36■□□□□ 0.05
CHRNA4-209ENST00000627000 AMY1AP04745 511 aa15.35■□□□□ 0.05
CHRNA4-209ENST00000627000 PAX1P15863 534 aa15.35■□□□□ 0.05
CHRNA4-209ENST00000627000 FCGR2BP31994 310 aaPredicted RBP15.35■□□□□ 0.05
CHRNA4-209ENST00000627000 REC114Q7Z4M0 266 aa15.35■□□□□ 0.05
CHRNA4-209ENST00000627000 OR5R1Q8NH85 324 aa15.35■□□□□ 0.05
CHRNA4-209ENST00000627000 MEGF9Q9H1U4 602 aa15.35■□□□□ 0.05
CHRNA4-209ENST00000627000 PRDM13Q9H4Q3 707 aa15.35■□□□□ 0.05
CHRNA4-209ENST00000627000 IL36BQ9NZH7 164 aa15.35■□□□□ 0.05
CHRNA4-209ENST00000627000 PITPNC1Q9UKF7 332 aa15.35■□□□□ 0.05
CHRNA4-209ENST00000627000 C17orf77Q96MU5 243 aa15.35■□□□□ 0.05
CHRNA4-209ENST00000627000 CHRDL1Q9BU40 450 aa15.35■□□□□ 0.05
CHRNA4-209ENST00000627000 CTSGP08311 255 aa15.34■□□□□ 0.05
CHRNA4-209ENST00000627000 HIST1H1EP10412 219 aaKnown RBP15.34■□□□□ 0.05
CHRNA4-209ENST00000627000 FOSL1P15407 271 aa15.34■□□□□ 0.05
CHRNA4-209ENST00000627000 DSCR9P59020 149 aa15.34■□□□□ 0.05
CHRNA4-209ENST00000627000 KRTAP10-9P60411 292 aa15.34■□□□□ 0.05
CHRNA4-209ENST00000627000 LBHQ53QV2 105 aaPredicted RBP15.34■□□□□ 0.05
CHRNA4-209ENST00000627000 GPR61Q9BZJ8 451 aa15.34■□□□□ 0.05
CHRNA4-209ENST00000627000 MOB4Q9Y3A3 225 aa15.34■□□□□ 0.05
CHRNA4-209ENST00000627000 B4DSR2 109 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms