RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 ACOT6Q3I5F7 207 aaPredicted RBP9.3□□□□□ -0.92
LINC00538-201ENST00000626109 FAM201AQ5SY85 155 aa9.3□□□□□ -0.92
LINC00538-201ENST00000626109 FAM168AQ92567 244 aa9.3□□□□□ -0.92
LINC00538-201ENST00000626109 ZNF503Q96F45 646 aa9.3□□□□□ -0.92
LINC00538-201ENST00000626109 DYSFO75923 2080 aa9.3□□□□□ -0.92
LINC00538-201ENST00000626109 FBN2P35556 2912 aa9.29□□□□□ -0.92
LINC00538-201ENST00000626109 A0A1W2PRE2 83 aa9.29□□□□□ -0.92
LINC00538-201ENST00000626109 RPL35AP18077 110 aaKnown RBP9.29□□□□□ -0.92
LINC00538-201ENST00000626109 RPL30P62888 115 aaKnown RBP9.29□□□□□ -0.92
LINC00538-201ENST00000626109 HOXA4Q00056 320 aaPredicted RBP9.29□□□□□ -0.92
LINC00538-201ENST00000626109 COL10A1Q03692 680 aa9.29□□□□□ -0.92
LINC00538-201ENST00000626109 TEX36Q5VZQ5 186 aa9.29□□□□□ -0.92
LINC00538-201ENST00000626109 DEFB108BQ8NET1 73 aa9.29□□□□□ -0.92
LINC00538-201ENST00000626109 CHD3Q12873 2000 aaKnown RBP9.29□□□□□ -0.92
LINC00538-201ENST00000626109 USF3Q68DE3 2245 aa9.29□□□□□ -0.92
LINC00538-201ENST00000626109 AKAP6Q13023 2319 aa9.29□□□□□ -0.92
LINC00538-201ENST00000626109 IGHV3OR15-7A0A075B7D8 119 aa9.29□□□□□ -0.92
LINC00538-201ENST00000626109 ADARB2-AS1A8MUL3 147 aa9.29□□□□□ -0.92
LINC00538-201ENST00000626109 C17orf98A8MV24 154 aa9.29□□□□□ -0.92
LINC00538-201ENST00000626109 FSTL3O95633 263 aa9.29□□□□□ -0.92
LINC00538-201ENST00000626109 TRGC1P0CF51 173 aa9.29□□□□□ -0.92
LINC00538-201ENST00000626109 HOXD3P31249 432 aaPredicted RBP9.29□□□□□ -0.92
LINC00538-201ENST00000626109 REG1BP48304 166 aa9.29□□□□□ -0.92
LINC00538-201ENST00000626109 RIPPLY3P57055 190 aa9.29□□□□□ -0.92
LINC00538-201ENST00000626109 ADIRFQ15847 76 aa9.29□□□□□ -0.92
LINC00538-201ENST00000626109 CLEC12BQ2HXU8 276 aa9.29□□□□□ -0.92
LINC00538-201ENST00000626109 LYG1Q8N1E2 194 aa9.29□□□□□ -0.92
LINC00538-201ENST00000626109 C10orf105Q8TEF2 133 aa9.29□□□□□ -0.92
LINC00538-201ENST00000626109 NPCDR1Q9BY65 106 aa9.29□□□□□ -0.92
LINC00538-201ENST00000626109 ZFP30Q9Y2G7 519 aa9.29□□□□□ -0.92
LINC00538-201ENST00000626109 PMS2P5A8MQ11 134 aa9.28□□□□□ -0.92
LINC00538-201ENST00000626109 DVL1O14640 695 aa9.28□□□□□ -0.92
LINC00538-201ENST00000626109 HMGB3O15347 200 aaKnown RBP9.28□□□□□ -0.92
LINC00538-201ENST00000626109 HPRT1P00492 218 aa9.28□□□□□ -0.92
LINC00538-201ENST00000626109 GCGP01275 180 aa9.28□□□□□ -0.92
LINC00538-201ENST00000626109 RPL8P62917 257 aaKnown RBP9.28□□□□□ -0.92
LINC00538-201ENST00000626109 LTC4SQ16873 150 aa9.28□□□□□ -0.92
LINC00538-201ENST00000626109 TMEM78Q5T7P6 136 aa9.28□□□□□ -0.92
LINC00538-201ENST00000626109 SLC25A48Q6ZT89 311 aaKnown RBP9.28□□□□□ -0.92
LINC00538-201ENST00000626109 FAM30AQ9NZY2 134 aa9.28□□□□□ -0.92
LINC00538-201ENST00000626109 TP53TG1Q9Y2A0 90 aa9.28□□□□□ -0.92
LINC00538-201ENST00000626109 CRYBG3Q68DQ2 2970 aa9.27□□□□□ -0.92
LINC00538-201ENST00000626109 H7BYZ3 331 aa9.27□□□□□ -0.93
LINC00538-201ENST00000626109 KIR2DS2P43631 304 aa9.27□□□□□ -0.93
LINC00538-201ENST00000626109 ERVK-16P61578 105 aa9.27□□□□□ -0.93
LINC00538-201ENST00000626109 CD164Q04900 197 aa9.27□□□□□ -0.93
LINC00538-201ENST00000626109 TMEM155Q4W5P6 130 aa9.27□□□□□ -0.93
LINC00538-201ENST00000626109 FAM19A5Q7Z5A7 132 aaPredicted RBP9.27□□□□□ -0.93
LINC00538-201ENST00000626109 OR4F5Q8NH21 305 aa9.27□□□□□ -0.93
LINC00538-201ENST00000626109 OR4F4Q96R69 305 aa9.27□□□□□ -0.93
LINC00538-201ENST00000626109 FOXC2Q99958 501 aa9.27□□□□□ -0.93
LINC00538-201ENST00000626109 BPESC1Q9GZL8 116 aa9.27□□□□□ -0.93
LINC00538-201ENST00000626109 SLC25A22Q9H936 323 aa9.27□□□□□ -0.93
LINC00538-201ENST00000626109 UNC79Q9P2D8 2635 aa9.27□□□□□ -0.93
LINC00538-201ENST00000626109 LRBAP50851 2863 aa9.27□□□□□ -0.93
LINC00538-201ENST00000626109 IGKV1D-33P01593 117 aa9.27□□□□□ -0.93
LINC00538-201ENST00000626109 IGKV1-33P01594 117 aa9.27□□□□□ -0.93
LINC00538-201ENST00000626109 GYPAP02724 150 aa9.27□□□□□ -0.93
LINC00538-201ENST00000626109 HILS1P60008 231 aa9.27□□□□□ -0.93
LINC00538-201ENST00000626109 HIST3H2BBQ8N257 126 aa9.27□□□□□ -0.93
LINC00538-201ENST00000626109 OR13A1Q8NGR1 328 aa9.27□□□□□ -0.93
LINC00538-201ENST00000626109 RASL11BQ9BPW5 248 aa9.27□□□□□ -0.93
LINC00538-201ENST00000626109 TXNDC17Q9BRA2 123 aa9.27□□□□□ -0.93
LINC00538-201ENST00000626109 HSPB8Q9UJY1 196 aa9.27□□□□□ -0.93
LINC00538-201ENST00000626109 CELSR2Q9HCU4 2923 aa9.26□□□□□ -0.93
LINC00538-201ENST00000626109 SPG11Q96JI7 2443 aa9.26□□□□□ -0.93
LINC00538-201ENST00000626109 IGHV4-30-2A0A087WSY4 118 aa9.26□□□□□ -0.93
LINC00538-201ENST00000626109 OR4C46A6NHA9 309 aa9.26□□□□□ -0.93
LINC00538-201ENST00000626109 MGST3O14880 152 aa9.26□□□□□ -0.93
LINC00538-201ENST00000626109 YPEL1O60688 119 aa9.26□□□□□ -0.93
LINC00538-201ENST00000626109 SLC25A16P16260 332 aa9.26□□□□□ -0.93
LINC00538-201ENST00000626109 HIST1H1BP16401 226 aaKnown RBP9.26□□□□□ -0.93
LINC00538-201ENST00000626109 BRWD1-AS2P59051 145 aa9.26□□□□□ -0.93
LINC00538-201ENST00000626109 RPL23P62829 140 aaKnown RBP9.26□□□□□ -0.93
LINC00538-201ENST00000626109 ADAMTSL5Q6ZMM2 481 aa9.26□□□□□ -0.93
LINC00538-201ENST00000626109 C16orf82Q7Z2V1 217 aa9.26□□□□□ -0.93
LINC00538-201ENST00000626109 OR4F17Q8NGA8 305 aa9.26□□□□□ -0.93
LINC00538-201ENST00000626109 OR10D4PQ8NGN7 298 aa9.26□□□□□ -0.93
LINC00538-201ENST00000626109 FRZBQ92765 325 aa9.26□□□□□ -0.93
LINC00538-201ENST00000626109 YPEL2Q96QA6 119 aa9.26□□□□□ -0.93
LINC00538-201ENST00000626109 PARLQ9H300 379 aa9.26□□□□□ -0.93
LINC00538-201ENST00000626109 SPANXA1Q9NS26 97 aa9.26□□□□□ -0.93
LINC00538-201ENST00000626109 ABCA12Q86UK0 2595 aa9.25□□□□□ -0.93
LINC00538-201ENST00000626109 IGKV1D-17A0A075B6S4 117 aa9.25□□□□□ -0.93
LINC00538-201ENST00000626109 A0A1W2PPI3 338 aa9.25□□□□□ -0.93
LINC00538-201ENST00000626109 VWC2LB2RUY7 222 aa9.25□□□□□ -0.93
LINC00538-201ENST00000626109 RBFOX2O43251 390 aaKnown RBP eCLIP9.25□□□□□ -0.93
LINC00538-201ENST00000626109 IGHG4P01861 327 aa9.25□□□□□ -0.93
LINC00538-201ENST00000626109 PFN1P07737 140 aaKnown RBP9.25□□□□□ -0.93
LINC00538-201ENST00000626109 MDKP21741 143 aaPredicted RBP9.25□□□□□ -0.93
LINC00538-201ENST00000626109 SRP14P37108 136 aaKnown RBP9.25□□□□□ -0.93
LINC00538-201ENST00000626109 GALR1P47211 349 aa9.25□□□□□ -0.93
LINC00538-201ENST00000626109 PYY3Q5JQD4 70 aa9.25□□□□□ -0.93
LINC00538-201ENST00000626109 C1orf195Q5TG92 126 aa9.25□□□□□ -0.93
LINC00538-201ENST00000626109 RFESDQ8TAC1 157 aa9.25□□□□□ -0.93
LINC00538-201ENST00000626109 CCL13Q99616 98 aa9.25□□□□□ -0.93
LINC00538-201ENST00000626109 PYGO2Q9BRQ0 406 aa9.25□□□□□ -0.93
LINC00538-201ENST00000626109 KCNIP2Q9NS61 270 aa9.25□□□□□ -0.93
LINC00538-201ENST00000626109 BAHCC1Q9P281 2608 aa9.25□□□□□ -0.93
LINC00538-201ENST00000626109 IGHV3-43A0A0B4J1X8 118 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms