RNA–Protein interactions for RNA: ENST00000623985.3

LINC00643-206, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 864 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-206ENST00000623985 RCL1Q9Y2P8 373 aaKnown RBP10.8□□□□□ -0.68
LINC00643-206ENST00000623985 TRAV6A0A075B6T7 132 aa10.79□□□□□ -0.68
LINC00643-206ENST00000623985 SMCO3A2RU48 225 aa10.79□□□□□ -0.68
LINC00643-206ENST00000623985 FNDC10F2Z333 226 aa10.79□□□□□ -0.68
LINC00643-206ENST00000623985 SOCS3O14543 225 aa10.79□□□□□ -0.68
LINC00643-206ENST00000623985 TSC22D2O75157 780 aa10.79□□□□□ -0.68
LINC00643-206ENST00000623985 HLA-DRB4P13762 266 aa10.79□□□□□ -0.68
LINC00643-206ENST00000623985 TAS2R30P59541 319 aa10.79□□□□□ -0.68
LINC00643-206ENST00000623985 NUTF2P61970 127 aaKnown RBP10.79□□□□□ -0.68
LINC00643-206ENST00000623985 SAMD13Q5VXD3 122 aa10.79□□□□□ -0.68
LINC00643-206ENST00000623985 CEMP1Q6PRD7 247 aaPredicted RBP10.79□□□□□ -0.68
LINC00643-206ENST00000623985 TMEM14EPQ6UXP3 125 aa10.79□□□□□ -0.68
LINC00643-206ENST00000623985 OR8I2Q8N0Y5 310 aa10.79□□□□□ -0.68
LINC00643-206ENST00000623985 S100ZQ8WXG8 99 aa10.79□□□□□ -0.68
LINC00643-206ENST00000623985 WDR12Q9GZL7 423 aaKnown RBP10.79□□□□□ -0.68
LINC00643-206ENST00000623985 MFFQ9GZY8 342 aa10.79□□□□□ -0.68
LINC00643-206ENST00000623985 HLA-DRB4X5D2U9 266 aa10.79□□□□□ -0.68
LINC00643-206ENST00000623985 A6NHS1 94 aa10.78□□□□□ -0.68
LINC00643-206ENST00000623985 ZNF705EA8MWA4 302 aaPredicted RBP10.78□□□□□ -0.68
LINC00643-206ENST00000623985 ID1P41134 155 aa10.78□□□□□ -0.68
LINC00643-206ENST00000623985 MEOX2P50222 304 aa10.78□□□□□ -0.68
LINC00643-206ENST00000623985 PAX9P55771 341 aa10.78□□□□□ -0.68
LINC00643-206ENST00000623985 DLK1P80370 383 aa10.78□□□□□ -0.68
LINC00643-206ENST00000623985 Q8NAQ8 132 aa10.78□□□□□ -0.68
LINC00643-206ENST00000623985 ZNF431Q8TF32 576 aaPredicted RBP10.78□□□□□ -0.68
LINC00643-206ENST00000623985 TMEM147Q9BVK8 224 aa10.78□□□□□ -0.68
LINC00643-206ENST00000623985 C1QTNF4Q9BXJ3 329 aa10.78□□□□□ -0.68
LINC00643-206ENST00000623985 KLK5Q9Y337 293 aaPredicted RBP10.78□□□□□ -0.68
LINC00643-206ENST00000623985 ZNF98A6NK75 572 aa10.77□□□□□ -0.69
LINC00643-206ENST00000623985 H3BMM0 161 aa10.77□□□□□ -0.69
LINC00643-206ENST00000623985 ISLRO14498 428 aa10.77□□□□□ -0.69
LINC00643-206ENST00000623985 CCSO14618 274 aa10.77□□□□□ -0.69
LINC00643-206ENST00000623985 METTL15P1P0C7V9 234 aa10.77□□□□□ -0.69
LINC00643-206ENST00000623985 MIFP14174 115 aa10.77□□□□□ -0.69
LINC00643-206ENST00000623985 ORM2P19652 201 aa10.77□□□□□ -0.69
LINC00643-206ENST00000623985 GATA2P23769 480 aaPredicted RBP10.77□□□□□ -0.69
LINC00643-206ENST00000623985 GALR1P47211 349 aa10.77□□□□□ -0.69
LINC00643-206ENST00000623985 ZNF846Q147U1 533 aa10.77□□□□□ -0.69
LINC00643-206ENST00000623985 CYP2G1PQ6ZSU1 146 aa10.77□□□□□ -0.69
LINC00643-206ENST00000623985 CSNK1G2-AS1Q8NCQ2 148 aa10.77□□□□□ -0.69
LINC00643-206ENST00000623985 OR10P1Q8NGE3 313 aa10.77□□□□□ -0.69
LINC00643-206ENST00000623985 OR1B1Q8NGR6 318 aa10.77□□□□□ -0.69
LINC00643-206ENST00000623985 C11orf45Q8TAV5 145 aa10.77□□□□□ -0.69
LINC00643-206ENST00000623985 PHLDA1Q8WV24 401 aaPredicted RBP10.77□□□□□ -0.69
LINC00643-206ENST00000623985 LINC00476Q8WZB0 136 aa10.77□□□□□ -0.69
LINC00643-206ENST00000623985 GPR82Q96P67 336 aa10.77□□□□□ -0.69
LINC00643-206ENST00000623985 SLC25A32Q9H2D1 315 aa10.77□□□□□ -0.69
LINC00643-206ENST00000623985 SLC25A22Q9H936 323 aa10.77□□□□□ -0.69
LINC00643-206ENST00000623985 GSKIPQ9P0R6 139 aa10.77□□□□□ -0.69
LINC00643-206ENST00000623985 MGAT4CQ9UBM8 478 aa10.77□□□□□ -0.69
LINC00643-206ENST00000623985 CCNKO75909 580 aa10.76□□□□□ -0.69
LINC00643-206ENST00000623985 MBPP02686 304 aaPredicted RBP10.76□□□□□ -0.69
LINC00643-206ENST00000623985 RRAS2P62070 204 aaPredicted RBP10.76□□□□□ -0.69
LINC00643-206ENST00000623985 SELENOTP62341 195 aa10.76□□□□□ -0.69
LINC00643-206ENST00000623985 MZT2BQ6NZ67 158 aa10.76□□□□□ -0.69
LINC00643-206ENST00000623985 TMEM182Q6ZP80 229 aaPredicted RBP10.76□□□□□ -0.69
LINC00643-206ENST00000623985 FOXI2Q6ZQN5 318 aa10.76□□□□□ -0.69
LINC00643-206ENST00000623985 SEC22CQ9BRL7 303 aa10.76□□□□□ -0.69
LINC00643-206ENST00000623985 SAV1Q9H4B6 383 aaPredicted RBP10.76□□□□□ -0.69
LINC00643-206ENST00000623985 NPVFQ9HCQ7 196 aa10.76□□□□□ -0.69
LINC00643-206ENST00000623985 CLEC5AQ9NY25 188 aa10.76□□□□□ -0.69
LINC00643-206ENST00000623985 TBC1D24Q9ULP9 559 aa10.76□□□□□ -0.69
LINC00643-206ENST00000623985 IGHV4-28A0A0C4DH34 117 aa10.75□□□□□ -0.69
LINC00643-206ENST00000623985 FAM240BA0A1B0GVZ2 78 aa10.75□□□□□ -0.69
LINC00643-206ENST00000623985 C7orf66A4D0T2 115 aa10.75□□□□□ -0.69
LINC00643-206ENST00000623985 H3BRN7 92 aa10.75□□□□□ -0.69
LINC00643-206ENST00000623985 K7EPK0 472 aa10.75□□□□□ -0.69
LINC00643-206ENST00000623985 DEFB4AO15263 64 aa10.75□□□□□ -0.69
LINC00643-206ENST00000623985 IL5P05113 134 aa10.75□□□□□ -0.69
LINC00643-206ENST00000623985 H2AFB2P0C5Z0 115 aa10.75□□□□□ -0.69
LINC00643-206ENST00000623985 LINC00869P0C866 280 aa10.75□□□□□ -0.69
LINC00643-206ENST00000623985 PLP1P60201 277 aa10.75□□□□□ -0.69
LINC00643-206ENST00000623985 ASAH1Q13510 395 aa10.75□□□□□ -0.69
LINC00643-206ENST00000623985 LCE2DQ5TA82 110 aaPredicted RBP10.75□□□□□ -0.69
LINC00643-206ENST00000623985 GDF5OSQ5U4N7 250 aa10.75□□□□□ -0.69
LINC00643-206ENST00000623985 SPATA31B1PQ5VZV4 182 aa10.75□□□□□ -0.69
LINC00643-206ENST00000623985 TEPPQ6URK8 271 aa10.75□□□□□ -0.69
LINC00643-206ENST00000623985 LINC00052Q96N35 136 aa10.75□□□□□ -0.69
LINC00643-206ENST00000623985 CLUHP3Q96NS8 147 aa10.75□□□□□ -0.69
LINC00643-206ENST00000623985 HRH4Q9H3N8 390 aa10.75□□□□□ -0.69
LINC00643-206ENST00000623985 BATF3Q9NR55 127 aa10.75□□□□□ -0.69
LINC00643-206ENST00000623985 X6R8D5 127 aa10.75□□□□□ -0.69
LINC00643-206ENST00000623985 FAM25EA8MYX2 175 aa10.74□□□□□ -0.69
LINC00643-206ENST00000623985 NANOS2P60321 138 aaKnown RBP10.74□□□□□ -0.69
LINC00643-206ENST00000623985 RAP2BP61225 183 aa10.74□□□□□ -0.69
LINC00643-206ENST00000623985 S100A7AQ86SG5 101 aa10.74□□□□□ -0.69
LINC00643-206ENST00000623985 C12orf45Q8N5I9 185 aaPredicted RBP10.74□□□□□ -0.69
LINC00643-206ENST00000623985 C16orf92Q96LL3 132 aa10.74□□□□□ -0.69
LINC00643-206ENST00000623985 GGACTQ9BVM4 153 aa10.74□□□□□ -0.69
LINC00643-206ENST00000623985 SCRT1Q9BWW7 348 aa10.74□□□□□ -0.69
LINC00643-206ENST00000623985 SLC25A39Q9BZJ4 359 aaPredicted RBP10.74□□□□□ -0.69
LINC00643-206ENST00000623985 DOK5Q9P104 306 aa10.74□□□□□ -0.69
LINC00643-206ENST00000623985 HIGD1AQ9Y241 93 aa10.74□□□□□ -0.69
LINC00643-206ENST00000623985 C5orf51A6NDU8 294 aa10.73□□□□□ -0.69
LINC00643-206ENST00000623985 L7N2F9 121 aa10.73□□□□□ -0.69
LINC00643-206ENST00000623985 RBMY1A1P0DJD3 496 aaKnown RBP10.73□□□□□ -0.69
LINC00643-206ENST00000623985 RBMY1CP0DJD4 496 aa10.73□□□□□ -0.69
LINC00643-206ENST00000623985 VAMP2P63027 116 aa10.73□□□□□ -0.69
LINC00643-206ENST00000623985 RBMY1FQ15415 496 aaKnown RBP10.73□□□□□ -0.69
LINC00643-206ENST00000623985 ZNF546Q86UE3 836 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms