RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 IGLC7A0M8Q6 106 aa7.37□□□□□ -1.23
VCL-206ENST00000623461 TOMM40O96008 361 aa7.37□□□□□ -1.23
VCL-206ENST00000623461 PDLIM4P50479 330 aa7.37□□□□□ -1.23
VCL-206ENST00000623461 C2orf82Q6UX34 121 aa7.37□□□□□ -1.23
VCL-206ENST00000623461 BMPERQ8N8U9 685 aa7.37□□□□□ -1.23
VCL-206ENST00000623461 SPAG8Q99932 426 aaPredicted RBP7.37□□□□□ -1.23
VCL-206ENST00000623461 SLC25A15Q9Y619 301 aa7.37□□□□□ -1.23
VCL-206ENST00000623461 SCN5AQ14524 2016 aa7.37□□□□□ -1.23
VCL-206ENST00000623461 TCRAP04437 139 aa7.37□□□□□ -1.23
VCL-206ENST00000623461 IGLL1P15814 213 aa7.37□□□□□ -1.23
VCL-206ENST00000623461 AZU1P20160 251 aa7.37□□□□□ -1.23
VCL-206ENST00000623461 GLRXP35754 106 aa7.37□□□□□ -1.23
VCL-206ENST00000623461 PLEKHB2Q96CS7 222 aa7.37□□□□□ -1.23
VCL-206ENST00000623461 IGKV1-27A0A075B6S5 117 aa7.37□□□□□ -1.23
VCL-206ENST00000623461 PNRC2Q9NPJ4 139 aaKnown RBP7.37□□□□□ -1.23
VCL-206ENST00000623461 ZNF492Q9P255 531 aa7.37□□□□□ -1.23
VCL-206ENST00000623461 TMEM42Q69YG0 159 aa7.37□□□□□ -1.23
VCL-206ENST00000623461 ZNF837Q96EG3 531 aaPredicted RBP7.37□□□□□ -1.23
VCL-206ENST00000623461 IGHV2-70DA0A0C4DH43 119 aa7.37□□□□□ -1.23
VCL-206ENST00000623461 TRBV7-9A0A0J9YWB2 115 aa7.36□□□□□ -1.23
VCL-206ENST00000623461 NTF4P34130 210 aa7.36□□□□□ -1.23
VCL-206ENST00000623461 PSG7Q13046 419 aa7.36□□□□□ -1.23
VCL-206ENST00000623461 TMEM101Q96IK0 257 aa7.36□□□□□ -1.23
VCL-206ENST00000623461 ZNF71Q9NQZ8 489 aaPredicted RBP7.36□□□□□ -1.23
VCL-206ENST00000623461 A0A1B0GUS0 222 aa7.36□□□□□ -1.23
VCL-206ENST00000623461 C15orf62A8K5M9 175 aa7.36□□□□□ -1.23
VCL-206ENST00000623461 EVI2AP22794 236 aa7.36□□□□□ -1.23
VCL-206ENST00000623461 RNF125Q96EQ8 232 aa7.36□□□□□ -1.23
VCL-206ENST00000623461 TIAF1O95411 115 aa7.36□□□□□ -1.23
VCL-206ENST00000623461 SNRPD3P62318 126 aaKnown RBP7.36□□□□□ -1.23
VCL-206ENST00000623461 LYPD1Q8N2G4 141 aa7.36□□□□□ -1.23
VCL-206ENST00000623461 TRGV9Q99603 122 aa7.36□□□□□ -1.23
VCL-206ENST00000623461 PPP1R27Q86WC6 154 aa7.36□□□□□ -1.23
VCL-206ENST00000623461 SP9P0CG40 484 aa7.36□□□□□ -1.23
VCL-206ENST00000623461 TAL2Q16559 108 aa7.36□□□□□ -1.23
VCL-206ENST00000623461 NABP1Q96AH0 204 aa7.36□□□□□ -1.23
VCL-206ENST00000623461 IGHV1-24A0A0C4DH33 117 aa7.36□□□□□ -1.23
VCL-206ENST00000623461 SMIM27A0A1W2PRY6 76 aa7.36□□□□□ -1.23
VCL-206ENST00000623461 S100A7L2Q5SY68 101 aa7.36□□□□□ -1.23
VCL-206ENST00000623461 CDPF1Q6NVV7 123 aa7.36□□□□□ -1.23
VCL-206ENST00000623461 TRAV21A0A0B4J279 112 aa7.35□□□□□ -1.23
VCL-206ENST00000623461 TMEM8BA6NDV4 472 aa7.35□□□□□ -1.23
VCL-206ENST00000623461 LYZL1Q6UWQ5 148 aa7.35□□□□□ -1.23
VCL-206ENST00000623461 MPDZO75970 2070 aa7.35□□□□□ -1.23
VCL-206ENST00000623461 PCNX2A6NKB5 2137 aa7.35□□□□□ -1.23
VCL-206ENST00000623461 LGALS9BQ3B8N2 356 aa7.35□□□□□ -1.23
VCL-206ENST00000623461 LGALS9CQ6DKI2 356 aa7.35□□□□□ -1.23
VCL-206ENST00000623461 ZNF329Q86UD4 541 aa7.35□□□□□ -1.23
VCL-206ENST00000623461 RAX2Q96IS3 184 aa7.35□□□□□ -1.23
VCL-206ENST00000623461 CCL25O15444 150 aa7.35□□□□□ -1.23
VCL-206ENST00000623461 LGALS1P09382 135 aaKnown RBP7.35□□□□□ -1.23
VCL-206ENST00000623461 IFITM1P13164 125 aa7.35□□□□□ -1.23
VCL-206ENST00000623461 FHL1Q13642 323 aa7.35□□□□□ -1.23
VCL-206ENST00000623461 DCTN5Q9BTE1 182 aa7.35□□□□□ -1.23
VCL-206ENST00000623461 FBXL15Q9H469 300 aa7.35□□□□□ -1.23
VCL-206ENST00000623461 FAM231DQ6ZW35 169 aa7.35□□□□□ -1.23
VCL-206ENST00000623461 OVOL2Q9BRP0 275 aa7.35□□□□□ -1.23
VCL-206ENST00000623461 C9orf153Q5TBE3 101 aa7.35□□□□□ -1.23
VCL-206ENST00000623461 ZC2HC1BQ5TFG8 222 aa7.35□□□□□ -1.23
VCL-206ENST00000623461 SLAQ13239 276 aa7.35□□□□□ -1.23
VCL-206ENST00000623461 ZNF726P1Q15940 193 aa7.35□□□□□ -1.23
VCL-206ENST00000623461 EDA2RQ9HAV5 297 aa7.35□□□□□ -1.23
VCL-206ENST00000623461 A0A0G2JRQ6 117 aa7.34□□□□□ -1.23
VCL-206ENST00000623461 PYGO2Q9BRQ0 406 aa7.34□□□□□ -1.23
VCL-206ENST00000623461 V9GYV3 84 aa7.34□□□□□ -1.23
VCL-206ENST00000623461 KIAA2026Q5HYC2 2103 aa7.34□□□□□ -1.23
VCL-206ENST00000623461 ZGRF1Q86YA3 2104 aa7.34□□□□□ -1.23
VCL-206ENST00000623461 IGLV3-12A0A075B6K2 115 aa7.34□□□□□ -1.23
VCL-206ENST00000623461 IL15RAQ13261 267 aa7.34□□□□□ -1.23
VCL-206ENST00000623461 ATRXP46100 2492 aa7.34□□□□□ -1.23
VCL-206ENST00000623461 IGKV3D-15A0A087WSY6 115 aa7.34□□□□□ -1.23
VCL-206ENST00000623461 IGKV3-15P01624 115 aa7.34□□□□□ -1.23
VCL-206ENST00000623461 PAX9P55771 341 aa7.34□□□□□ -1.23
VCL-206ENST00000623461 BOD1L2Q8IYS8 172 aa7.34□□□□□ -1.23
VCL-206ENST00000623461 SLC25A45Q8N413 288 aa7.34□□□□□ -1.23
VCL-206ENST00000623461 RPL15P61313 204 aaKnown RBP7.34□□□□□ -1.23
VCL-206ENST00000623461 FOXF2Q12947 444 aa7.34□□□□□ -1.23
VCL-206ENST00000623461 GFRA3O60609 400 aa7.34□□□□□ -1.23
VCL-206ENST00000623461 PLAURQ03405 335 aa7.34□□□□□ -1.23
VCL-206ENST00000623461 DEFB125Q8N687 156 aa7.34□□□□□ -1.23
VCL-206ENST00000623461 KMT2EQ8IZD2 1858 aa7.34□□□□□ -1.24
VCL-206ENST00000623461 TRAV12-3A0A0B4J271 114 aa7.33□□□□□ -1.24
VCL-206ENST00000623461 EFEMP2O95967 443 aa7.33□□□□□ -1.24
VCL-206ENST00000623461 CCL19Q99731 98 aa7.33□□□□□ -1.24
VCL-206ENST00000623461 DPM3Q9P2X0 92 aa7.33□□□□□ -1.24
VCL-206ENST00000623461 IL18BPO95998 194 aa7.33□□□□□ -1.24
VCL-206ENST00000623461 CECR9P0C854 216 aa7.33□□□□□ -1.24
VCL-206ENST00000623461 GGTLC3B5MD39 225 aa7.33□□□□□ -1.24
VCL-206ENST00000623461 C9JAW5 83 aa7.33□□□□□ -1.24
VCL-206ENST00000623461 Q6ZRM9 215 aa7.33□□□□□ -1.24
VCL-206ENST00000623461 TMEM158Q8WZ71 300 aa7.33□□□□□ -1.24
VCL-206ENST00000623461 ZNF106Q9H2Y7 1883 aaKnown RBP7.33□□□□□ -1.24
VCL-206ENST00000623461 RFPL3SP0C7P2 107 aa7.33□□□□□ -1.24
VCL-206ENST00000623461 RNASE4P34096 147 aaKnown RBP7.33□□□□□ -1.24
VCL-206ENST00000623461 MORN3Q6PF18 240 aaPredicted RBP7.33□□□□□ -1.24
VCL-206ENST00000623461 SELENOKQ9Y6D0 94 aa7.33□□□□□ -1.24
VCL-206ENST00000623461 GAGE5Q13069 117 aa7.32□□□□□ -1.24
VCL-206ENST00000623461 GAGE6Q13070 117 aa7.32□□□□□ -1.24
VCL-206ENST00000623461 LHFPL4Q7Z7J7 247 aa7.32□□□□□ -1.24
VCL-206ENST00000623461 A0A1W2PR77 199 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms