RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 Q9H3A6 140 aa11.31□□□□□ -0.6
LDB3-209ENST00000623056 AP5S1Q9NUS5 200 aa11.31□□□□□ -0.6
LDB3-209ENST00000623056 SELENOKQ9Y6D0 94 aa11.31□□□□□ -0.6
LDB3-209ENST00000623056 OVOL3O00110 214 aa11.31□□□□□ -0.6
LDB3-209ENST00000623056 GP9P14770 177 aa11.31□□□□□ -0.6
LDB3-209ENST00000623056 SUB1P53999 127 aaKnown RBP eCLIP11.31□□□□□ -0.6
LDB3-209ENST00000623056 CIARTQ8N365 385 aaPredicted RBP11.31□□□□□ -0.6
LDB3-209ENST00000623056 FAM216BQ8N7L0 139 aa11.31□□□□□ -0.6
LDB3-209ENST00000623056 AP1S3Q96PC3 154 aa11.31□□□□□ -0.6
LDB3-209ENST00000623056 CCL13Q99616 98 aa11.31□□□□□ -0.6
LDB3-209ENST00000623056 SSUH2Q9Y2M2 353 aa11.31□□□□□ -0.6
LDB3-209ENST00000623056 CADP27708 2225 aa11.31□□□□□ -0.6
LDB3-209ENST00000623056 G3V4G9 280 aa11.3□□□□□ -0.6
LDB3-209ENST00000623056 H3BRM9 83 aa11.3□□□□□ -0.6
LDB3-209ENST00000623056 ATP1A1-AS1Q5TC04 95 aa11.3□□□□□ -0.6
LDB3-209ENST00000623056 Q71RC1 249 aaPredicted RBP11.3□□□□□ -0.6
LDB3-209ENST00000623056 Q86TA4 180 aa11.3□□□□□ -0.6
LDB3-209ENST00000623056 TMEM167AQ8TBQ9 72 aa11.3□□□□□ -0.6
LDB3-209ENST00000623056 RABAC1Q9UI14 185 aa11.3□□□□□ -0.6
LDB3-209ENST00000623056 ZNF318Q5VUA4 2279 aa11.3□□□□□ -0.6
LDB3-209ENST00000623056 RAI1Q7Z5J4 1906 aaPredicted RBP11.3□□□□□ -0.6
LDB3-209ENST00000623056 TRAV8-1A0A0A6YYK1 113 aa11.3□□□□□ -0.6
LDB3-209ENST00000623056 PAX2Q02962 417 aa11.3□□□□□ -0.6
LDB3-209ENST00000623056 TMEM178AQ8NBL3 297 aa11.3□□□□□ -0.6
LDB3-209ENST00000623056 OR5AN1Q8NGI8 311 aa11.3□□□□□ -0.6
LDB3-209ENST00000623056 FLYWCH2Q96CP2 140 aaKnown RBP11.3□□□□□ -0.6
LDB3-209ENST00000623056 FER1L6-AS2Q96M78 137 aa11.3□□□□□ -0.6
LDB3-209ENST00000623056 K7EP34 96 aa11.29□□□□□ -0.6
LDB3-209ENST00000623056 KLK10O43240 276 aa11.29□□□□□ -0.6
LDB3-209ENST00000623056 TMEM30BQ3MIR4 351 aa11.29□□□□□ -0.6
LDB3-209ENST00000623056 OR10AG1Q8NH19 301 aa11.29□□□□□ -0.6
LDB3-209ENST00000623056 RNF7Q9UBF6 113 aa11.29□□□□□ -0.6
LDB3-209ENST00000623056 DMXL1Q9Y485 3027 aa11.29□□□□□ -0.6
LDB3-209ENST00000623056 MUC6Q6W4X9 2439 aa11.29□□□□□ -0.6
LDB3-209ENST00000623056 EP300Q09472 2414 aaPredicted RBP11.29□□□□□ -0.6
LDB3-209ENST00000623056 A0A1B0GUT8 65 aa11.29□□□□□ -0.6
LDB3-209ENST00000623056 hADV38S2A0JD32 116 aa11.29□□□□□ -0.6
LDB3-209ENST00000623056 A6NDN8 102 aa11.29□□□□□ -0.6
LDB3-209ENST00000623056 H3BUT2 72 aa11.29□□□□□ -0.6
LDB3-209ENST00000623056 TM4SF5O14894 197 aa11.29□□□□□ -0.6
LDB3-209ENST00000623056 CSN1S1P47710 185 aa11.29□□□□□ -0.6
LDB3-209ENST00000623056 C16orf54Q6UWD8 224 aa11.29□□□□□ -0.6
LDB3-209ENST00000623056 FA2HQ7L5A8 372 aa11.29□□□□□ -0.6
LDB3-209ENST00000623056 NAA38Q9BRA0 125 aaKnown RBP11.29□□□□□ -0.6
LDB3-209ENST00000623056 CACNA1GO43497 2377 aa11.28□□□□□ -0.6
LDB3-209ENST00000623056 ARMS2P0C7Q2 107 aa11.28□□□□□ -0.6
LDB3-209ENST00000623056 TMEM164Q5U3C3 297 aa11.28□□□□□ -0.6
LDB3-209ENST00000623056 DPF1Q92782 380 aa11.28□□□□□ -0.6
LDB3-209ENST00000623056 DKK4Q9UBT3 224 aa11.28□□□□□ -0.6
LDB3-209ENST00000623056 IGHG3P01860 377 aa11.27□□□□□ -0.6
LDB3-209ENST00000623056 ZNF788Q6ZQV5 615 aa11.27□□□□□ -0.6
LDB3-209ENST00000623056 BHLHA15Q7RTS1 189 aaPredicted RBP11.27□□□□□ -0.6
LDB3-209ENST00000623056 PRNTQ86SH4 94 aa11.27□□□□□ -0.6
LDB3-209ENST00000623056 PIP4P2Q8N4L2 257 aa11.27□□□□□ -0.6
LDB3-209ENST00000623056 OR4A5Q8NH83 315 aa11.27□□□□□ -0.6
LDB3-209ENST00000623056 PRSS3P2Q8NHM4 247 aa11.27□□□□□ -0.6
LDB3-209ENST00000623056 HILPDAQ9Y5L2 63 aa11.27□□□□□ -0.6
LDB3-209ENST00000623056 SLC25A15Q9Y619 301 aa11.27□□□□□ -0.6
LDB3-209ENST00000623056 INTS1Q8N201 2190 aaKnown RBP11.27□□□□□ -0.6
LDB3-209ENST00000623056 IGLV2-11P01706 119 aa11.27□□□□□ -0.61
LDB3-209ENST00000623056 FAM106CPP0CH98 169 aa11.27□□□□□ -0.61
LDB3-209ENST00000623056 KIR3DS1Q14943 382 aa11.27□□□□□ -0.61
LDB3-209ENST00000623056 FAM106AQ4KMX7 169 aa11.27□□□□□ -0.61
LDB3-209ENST00000623056 WFDC8Q8IUA0 241 aa11.27□□□□□ -0.61
LDB3-209ENST00000623056 OR8A1Q8NGG7 326 aa11.27□□□□□ -0.61
LDB3-209ENST00000623056 VSTM2AQ8TAG5 236 aa11.27□□□□□ -0.61
LDB3-209ENST00000623056 TRGV9Q99603 122 aa11.27□□□□□ -0.61
LDB3-209ENST00000623056 ZNF71Q9NQZ8 489 aaPredicted RBP11.27□□□□□ -0.61
LDB3-209ENST00000623056 PLSCR4Q9NRQ2 329 aa11.27□□□□□ -0.61
LDB3-209ENST00000623056 ICE1Q9Y2F5 2266 aa11.26□□□□□ -0.61
LDB3-209ENST00000623056 A0A0G2JLM5 398 aa11.26□□□□□ -0.61
LDB3-209ENST00000623056 A0A1W2PPI3 338 aa11.26□□□□□ -0.61
LDB3-209ENST00000623056 CRYGCP07315 174 aa11.26□□□□□ -0.61
LDB3-209ENST00000623056 GATA4P43694 442 aa11.26□□□□□ -0.61
LDB3-209ENST00000623056 BOD1L2Q8IYS8 172 aa11.26□□□□□ -0.61
LDB3-209ENST00000623056 OR4C13Q8NGP0 309 aa11.26□□□□□ -0.61
LDB3-209ENST00000623056 SRSF12Q8WXF0 261 aaKnown RBP11.26□□□□□ -0.61
LDB3-209ENST00000623056 A0A096LNJ9 63 aa11.26□□□□□ -0.61
LDB3-209ENST00000623056 ZNF785A8K8V0 405 aa11.26□□□□□ -0.61
LDB3-209ENST00000623056 IGLV2-23P01705 113 aa11.26□□□□□ -0.61
LDB3-209ENST00000623056 LOXL1Q08397 574 aaPredicted RBP11.26□□□□□ -0.61
LDB3-209ENST00000623056 RIGQ13278 110 aa11.26□□□□□ -0.61
LDB3-209ENST00000623056 DIAPH2-AS1Q14236 149 aa11.26□□□□□ -0.61
LDB3-209ENST00000623056 GOLT1AQ6ZVE7 132 aa11.26□□□□□ -0.61
LDB3-209ENST00000623056 NEGR1Q7Z3B1 354 aa11.26□□□□□ -0.61
LDB3-209ENST00000623056 TMEM116Q8NCL8 245 aa11.26□□□□□ -0.61
LDB3-209ENST00000623056 OR2K2Q8NGT1 345 aa11.26□□□□□ -0.61
LDB3-209ENST00000623056 OR10X1Q8NGY0 326 aa11.26□□□□□ -0.61
LDB3-209ENST00000623056 OTORQ9NRC9 128 aa11.26□□□□□ -0.61
LDB3-209ENST00000623056 OTOGLQ3ZCN5 2332 aa11.26□□□□□ -0.61
LDB3-209ENST00000623056 PLXNB1O43157 2135 aa11.26□□□□□ -0.61
LDB3-209ENST00000623056 M0R1B8 84 aa11.25□□□□□ -0.61
LDB3-209ENST00000623056 SMAD7O15105 426 aaKnown RBP11.25□□□□□ -0.61
LDB3-209ENST00000623056 TCTAP57738 103 aa11.25□□□□□ -0.61
LDB3-209ENST00000623056 NHLH1Q02575 133 aa11.25□□□□□ -0.61
LDB3-209ENST00000623056 HSD52Q0P140 79 aa11.25□□□□□ -0.61
LDB3-209ENST00000623056 HCP5Q6MZN7 132 aa11.25□□□□□ -0.61
LDB3-209ENST00000623056 RPRMLQ8N4K4 120 aa11.25□□□□□ -0.61
LDB3-209ENST00000623056 GATD1Q8NB37 220 aa11.25□□□□□ -0.61
LDB3-209ENST00000623056 OR1N2Q8NGR9 330 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms