RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 WFDC3Q8IUB2 231 aa10.42□□□□□ -0.74
MSH6-215ENST00000622629 DPF1Q92782 380 aa10.42□□□□□ -0.74
MSH6-215ENST00000622629 RNF125Q96EQ8 232 aa10.42□□□□□ -0.74
MSH6-215ENST00000622629 VKORC1Q9BQB6 163 aa10.42□□□□□ -0.74
MSH6-215ENST00000622629 MIEN1Q9BRT3 115 aa10.42□□□□□ -0.74
MSH6-215ENST00000622629 OR2T8A6NH00 312 aa10.42□□□□□ -0.74
MSH6-215ENST00000622629 NPPCP23582 126 aa10.42□□□□□ -0.74
MSH6-215ENST00000622629 TMEM116Q8NCL8 245 aa10.42□□□□□ -0.74
MSH6-215ENST00000622629 OR4C46A6NHA9 309 aa10.41□□□□□ -0.74
MSH6-215ENST00000622629 GGTLC3B5MD39 225 aa10.41□□□□□ -0.74
MSH6-215ENST00000622629 KLRD1Q13241 179 aa10.41□□□□□ -0.74
MSH6-215ENST00000622629 LCN12Q6JVE5 192 aa10.41□□□□□ -0.74
MSH6-215ENST00000622629 ARPC1AQ92747 370 aa10.41□□□□□ -0.74
MSH6-215ENST00000622629 PRDM13Q9H4Q3 707 aa10.41□□□□□ -0.74
MSH6-215ENST00000622629 XIRP2A4UGR9 3374 aa10.41□□□□□ -0.74
MSH6-215ENST00000622629 SNAI2O43623 268 aa10.41□□□□□ -0.74
MSH6-215ENST00000622629 COL8A2P25067 703 aa10.41□□□□□ -0.74
MSH6-215ENST00000622629 KLRB1Q12918 225 aa10.41□□□□□ -0.74
MSH6-215ENST00000622629 MSMPQ1L6U9 139 aa10.41□□□□□ -0.74
MSH6-215ENST00000622629 TSKUQ8WUA8 353 aa10.41□□□□□ -0.74
MSH6-215ENST00000622629 WT1-ASQ06250 92 aa10.41□□□□□ -0.74
MSH6-215ENST00000622629 GTF2H5Q6ZYL4 71 aa10.41□□□□□ -0.74
MSH6-215ENST00000622629 ZNF295-AS1Q8N0V1 137 aa10.41□□□□□ -0.74
MSH6-215ENST00000622629 CIARTQ8N365 385 aaPredicted RBP10.41□□□□□ -0.74
MSH6-215ENST00000622629 SIGLEC9Q9Y336 463 aa10.41□□□□□ -0.74
MSH6-215ENST00000622629 SLC25A34Q6PIV7 304 aa10.4□□□□□ -0.74
MSH6-215ENST00000622629 C8orf46Q8TAG6 207 aa10.4□□□□□ -0.74
MSH6-215ENST00000622629 C16orf92Q96LL3 132 aa10.4□□□□□ -0.74
MSH6-215ENST00000622629 TPSG1Q9NRR2 321 aa10.4□□□□□ -0.74
MSH6-215ENST00000622629 APOHP02749 345 aaPredicted RBP10.4□□□□□ -0.74
MSH6-215ENST00000622629 CNTFRP26992 372 aa10.4□□□□□ -0.74
MSH6-215ENST00000622629 TFPI2P48307 235 aa10.4□□□□□ -0.74
MSH6-215ENST00000622629 PET117Q6UWS5 81 aa10.4□□□□□ -0.74
MSH6-215ENST00000622629 ZNF738Q8NE65 137 aa10.4□□□□□ -0.74
MSH6-215ENST00000622629 OR10AG1Q8NH19 301 aa10.4□□□□□ -0.74
MSH6-215ENST00000622629 ASCL2Q99929 193 aa10.4□□□□□ -0.74
MSH6-215ENST00000622629 OTORQ9NRC9 128 aa10.4□□□□□ -0.74
MSH6-215ENST00000622629 CEACAM8P31997 349 aaPredicted RBP10.4□□□□□ -0.74
MSH6-215ENST00000622629 UQCRFS1P47985 274 aa10.4□□□□□ -0.74
MSH6-215ENST00000622629 LY6EQ16553 131 aa10.4□□□□□ -0.74
MSH6-215ENST00000622629 CHODLQ9H9P2 273 aa10.4□□□□□ -0.74
MSH6-215ENST00000622629 NDUFA4L2Q9NRX3 87 aa10.4□□□□□ -0.74
MSH6-215ENST00000622629 MSRB2Q9Y3D2 182 aa10.4□□□□□ -0.74
MSH6-215ENST00000622629 VCANP13611 3396 aa10.4□□□□□ -0.75
MSH6-215ENST00000622629 NUP35Q8NFH5 326 aa10.39□□□□□ -0.75
MSH6-215ENST00000622629 METTL26Q96S19 204 aa10.39□□□□□ -0.75
MSH6-215ENST00000622629 C1orf194Q5T5A4 169 aa10.39□□□□□ -0.75
MSH6-215ENST00000622629 UNQ6494/PRO21346Q6UXR6 183 aa10.39□□□□□ -0.75
MSH6-215ENST00000622629 LY96Q9Y6Y9 160 aa10.39□□□□□ -0.75
MSH6-215ENST00000622629 TYMSP04818 313 aa10.39□□□□□ -0.75
MSH6-215ENST00000622629 PSG9Q00887 426 aa10.39□□□□□ -0.75
MSH6-215ENST00000622629 IGFL3Q6UXB1 125 aa10.39□□□□□ -0.75
MSH6-215ENST00000622629 OR5AN1Q8NGI8 311 aa10.39□□□□□ -0.75
MSH6-215ENST00000622629 NOTCH2Q04721 2471 aa10.39□□□□□ -0.75
MSH6-215ENST00000622629 SLC25A39Q9BZJ4 359 aaPredicted RBP10.39□□□□□ -0.75
MSH6-215ENST00000622629 PSG8Q9UQ74 426 aa10.39□□□□□ -0.75
MSH6-215ENST00000622629 TCRAP04437 139 aa10.38□□□□□ -0.75
MSH6-215ENST00000622629 MGPP08493 103 aa10.38□□□□□ -0.75
MSH6-215ENST00000622629 Q8TCH9 128 aa10.38□□□□□ -0.75
MSH6-215ENST00000622629 TNFRSF14Q92956 283 aa10.38□□□□□ -0.75
MSH6-215ENST00000622629 C18orf15Q96N68 181 aa10.38□□□□□ -0.75
MSH6-215ENST00000622629 FNDC10F2Z333 226 aa10.38□□□□□ -0.75
MSH6-215ENST00000622629 M0QZ24 198 aa10.38□□□□□ -0.75
MSH6-215ENST00000622629 PROP1O75360 226 aa10.38□□□□□ -0.75
MSH6-215ENST00000622629 SEM1Q6ZVN7 128 aa10.38□□□□□ -0.75
MSH6-215ENST00000622629 LOXP28300 417 aaPredicted RBP10.38□□□□□ -0.75
MSH6-215ENST00000622629 DAZAP2Q15038 168 aaPredicted RBP10.38□□□□□ -0.75
MSH6-215ENST00000622629 VWC2Q2TAL6 325 aa10.38□□□□□ -0.75
MSH6-215ENST00000622629 OR10J3Q5JRS4 329 aa10.38□□□□□ -0.75
MSH6-215ENST00000622629 NIT1Q86X76 327 aa10.38□□□□□ -0.75
MSH6-215ENST00000622629 A8MWP6 167 aa10.37□□□□□ -0.75
MSH6-215ENST00000622629 BUB1B-PAK6H3BSN5 160 aa10.37□□□□□ -0.75
MSH6-215ENST00000622629 M0R3E3 92 aa10.37□□□□□ -0.75
MSH6-215ENST00000622629 HTN1P15515 57 aa10.37□□□□□ -0.75
MSH6-215ENST00000622629 PRR20EP86478 221 aa10.37□□□□□ -0.75
MSH6-215ENST00000622629 PRR20CP86479 221 aa10.37□□□□□ -0.75
MSH6-215ENST00000622629 PRR20DP86480 221 aa10.37□□□□□ -0.75
MSH6-215ENST00000622629 PRR20BP86481 221 aa10.37□□□□□ -0.75
MSH6-215ENST00000622629 PRR20AP86496 221 aa10.37□□□□□ -0.75
MSH6-215ENST00000622629 TRGV9Q99603 122 aa10.37□□□□□ -0.75
MSH6-215ENST00000622629 F11RQ9Y624 299 aaKnown RBP10.37□□□□□ -0.75
MSH6-215ENST00000622629 A6NNC1 897 aa10.37□□□□□ -0.75
MSH6-215ENST00000622629 GPX1P07203 203 aa10.37□□□□□ -0.75
MSH6-215ENST00000622629 BRWD1-AS2P59051 145 aa10.37□□□□□ -0.75
MSH6-215ENST00000622629 TMEM155Q4W5P6 130 aa10.37□□□□□ -0.75
MSH6-215ENST00000622629 ZFP30Q9Y2G7 519 aa10.37□□□□□ -0.75
MSH6-215ENST00000622629 C3orf79P0CE67 100 aa10.37□□□□□ -0.75
MSH6-215ENST00000622629 DLX6P56179 175 aa10.37□□□□□ -0.75
MSH6-215ENST00000622629 DMRTA1Q5VZB9 504 aa10.37□□□□□ -0.75
MSH6-215ENST00000622629 ERASQ7Z444 233 aa10.37□□□□□ -0.75
MSH6-215ENST00000622629 LAMTOR2Q9Y2Q5 125 aa10.37□□□□□ -0.75
MSH6-215ENST00000622629 ANKRD11Q6UB99 2663 aaPredicted RBP10.37□□□□□ -0.75
MSH6-215ENST00000622629 IGFL2Q6UWQ7 119 aa10.37□□□□□ -0.75
MSH6-215ENST00000622629 CLEC19AQ6UXS0 136 aa10.37□□□□□ -0.75
MSH6-215ENST00000622629 NEU4Q8WWR8 484 aaPredicted RBP10.37□□□□□ -0.75
MSH6-215ENST00000622629 PRELID3AQ96N28 172 aa10.37□□□□□ -0.75
MSH6-215ENST00000622629 NUDT3O95989 172 aa10.36□□□□□ -0.75
MSH6-215ENST00000622629 ZNF833PQ6ZTB9 187 aa10.36□□□□□ -0.75
MSH6-215ENST00000622629 LSM4Q9Y4Z0 139 aaKnown RBP10.36□□□□□ -0.75
MSH6-215ENST00000622629 TRBV20OR9-2A0A075B6H5 130 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms