RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 SH3BGRL3Q9H299 93 aa2.03□□□□□ -2.08
CPNE3-213ENST00000622183 TMEM133Q9H2Q1 129 aa2.03□□□□□ -2.08
CPNE3-213ENST00000622183 CST9LQ9H4G1 147 aa2.03□□□□□ -2.08
CPNE3-213ENST00000622183 SS18L2Q9UHA2 77 aa2.03□□□□□ -2.08
CPNE3-213ENST00000622183 ERG28Q9UKR5 140 aa2.03□□□□□ -2.08
CPNE3-213ENST00000622183 RBM7Q9Y580 266 aaKnown RBP2.03□□□□□ -2.08
CPNE3-213ENST00000622183 CCDC88AQ3V6T2 1871 aa2.03□□□□□ -2.09
CPNE3-213ENST00000622183 ECM29Q5VYK3 1845 aa2.03□□□□□ -2.09
CPNE3-213ENST00000622183 KIF13AQ9H1H9 1805 aa2.03□□□□□ -2.09
CPNE3-213ENST00000622183 KIF13BQ9NQT8 1826 aa2.03□□□□□ -2.09
CPNE3-213ENST00000622183 QRICH2Q9H0J4 1663 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 MAPKBP1O60336 1514 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 ZMYM4Q5VZL5 1548 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 DUOX2Q9NRD8 1548 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 MYO9BQ13459 2157 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 NSD3Q9BZ95 1437 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 IGHV3-64A0A075B6Q5 118 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 A0A0J9YW62 118 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 MAP1LC3B2A6NCE7 125 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 ARRDC5A6NEK1 342 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 IFITM5A6NNB3 132 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 SNAPC5O75971 98 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 IFNA7P01567 189 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 CASP1P29466 404 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 RAB5CP51148 216 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 COPZ1P61923 177 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 DEFB103AP81534 67 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 PLCXD2Q0VAA5 305 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 TPRXLQ17RH7 258 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 ACOT6Q3I5F7 207 aaPredicted RBP2.02□□□□□ -2.09
CPNE3-213ENST00000622183 LYZL1Q6UWQ5 148 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 Q6ZTI0 123 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 TCTE3Q8IZS6 198 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 ST6GALNAC3Q8NDV1 305 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 SLC7A6Q92536 515 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 CMSS1Q9BQ75 279 aaKnown RBP2.02□□□□□ -2.09
CPNE3-213ENST00000622183 REG4Q9BYZ8 158 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 MAP1LC3BQ9GZQ8 125 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 MRPL27Q9P0M9 148 aaKnown RBP2.02□□□□□ -2.09
CPNE3-213ENST00000622183 DOK5Q9P104 306 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 V9GYS6 101 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 NLRC5Q86WI3 1866 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 CDK5RAP2Q96SN8 1893 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 PARP14Q460N5 1801 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 POLR1AO95602 1720 aaPredicted RBP2.02□□□□□ -2.09
CPNE3-213ENST00000622183 ABCA5Q8WWZ7 1642 aa2.02□□□□□ -2.09
CPNE3-213ENST00000622183 CEP170BQ9Y4F5 1589 aaPredicted RBP2.02□□□□□ -2.09
CPNE3-213ENST00000622183 DOCK3Q8IZD9 2030 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 ZNF638Q14966 1978 aaKnown RBP2.01□□□□□ -2.09
CPNE3-213ENST00000622183 PRG4Q92954 1404 aaPredicted RBP2.01□□□□□ -2.09
CPNE3-213ENST00000622183 ROBO3Q96MS0 1386 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 IGLV3-9A0A075B6K5 115 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 TRAV36DV7A0A075B6V5 113 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 OR4C46A6NHA9 309 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 APOA2P02652 100 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 SRP19P09132 144 aaKnown RBP2.01□□□□□ -2.09
CPNE3-213ENST00000622183 UBBP0CG47 229 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 FGF6P10767 208 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 CCL5P13501 91 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 EVI2AP22794 236 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 PEBP1P30086 187 aaKnown RBP2.01□□□□□ -2.09
CPNE3-213ENST00000622183 BRS3P32247 399 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 DEFA1P59665 94 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 OR8B8Q15620 311 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 LTC4SQ16873 150 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 IAH1Q2TAA2 248 aaPredicted RBP2.01□□□□□ -2.09
CPNE3-213ENST00000622183 Q5BKY6 102 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 GLT8D1Q68CQ7 371 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 TSTD1Q8NFU3 115 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 OR51T1Q8NGJ9 327 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 MCFD2Q8NI22 146 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 ZNF418Q8TF45 676 aaPredicted RBP2.01□□□□□ -2.09
CPNE3-213ENST00000622183 S100ZQ8WXG8 99 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 ARL11Q969Q4 196 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 TMEM106AQ96A25 262 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 GPR146Q96CH1 333 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 PLEKHB2Q96CS7 222 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 IMMP2LQ96T52 175 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 KLF6Q99612 283 aaPredicted RBP2.01□□□□□ -2.09
CPNE3-213ENST00000622183 PSMG3Q9BT73 122 aaPredicted RBP2.01□□□□□ -2.09
CPNE3-213ENST00000622183 EFCAB11Q9BUY7 163 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 ENY2Q9NPA8 101 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 LYRM2Q9NU23 88 aaPredicted RBP2.01□□□□□ -2.09
CPNE3-213ENST00000622183 MED11Q9P086 117 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 NAT8BQ9UHF3 227 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 HSPB8Q9UJY1 196 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 TRAPPC2LQ9UL33 140 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 MROH1Q8NDA8 1641 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 DSCAMO60469 2012 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 MYH7BA7E2Y1 1941 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 PZPP20742 1482 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 ITGB4P16144 1822 aa2.01□□□□□ -2.09
CPNE3-213ENST00000622183 FANCMQ8IYD8 2048 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 TRPM6Q9BX84 2022 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 PPRC1Q5VV67 1664 aaKnown RBP2□□□□□ -2.09
CPNE3-213ENST00000622183 RAPGEF6Q8TEU7 1601 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 ICE1Q9Y2F5 2266 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 TMSB15BA0A087X1C1 80 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 TMEM218A2RU14 115 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 J3KT08 172 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms