RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, human

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM3A-222	ENST00000621967	IGHV3-72	A0A0B4J1Y9	119 aa		13.88	□□□□□ -0.19
FAM3A-222	ENST00000621967	ENSA	O43768	121 aa	Known RBP	13.88	□□□□□ -0.19
FAM3A-222	ENST00000621967	SNRPC	P09234	159 aa	Known RBP	13.88	□□□□□ -0.19
FAM3A-222	ENST00000621967	TPTE2P1	Q5T6R2	138 aa		13.88	□□□□□ -0.19
FAM3A-222	ENST00000621967	TMEM116	Q8NCL8	245 aa		13.88	□□□□□ -0.19
FAM3A-222	ENST00000621967	STXBP6	Q8NFX7	210 aa		13.88	□□□□□ -0.19
FAM3A-222	ENST00000621967	SPINK4	O60575	86 aa		13.88	□□□□□ -0.19
FAM3A-222	ENST00000621967	RASL11A	Q6T310	242 aa		13.88	□□□□□ -0.19
FAM3A-222	ENST00000621967	TEX43	Q6ZNM6	134 aa		13.88	□□□□□ -0.19
FAM3A-222	ENST00000621967	NHLRC2	Q8NBF2	726 aa		13.88	□□□□□ -0.19
FAM3A-222	ENST00000621967	WIPF2	Q8TF74	440 aa	Predicted RBP	13.88	□□□□□ -0.19
FAM3A-222	ENST00000621967	MISP3	Q96FF7	219 aa		13.88	□□□□□ -0.19
FAM3A-222	ENST00000621967		Q96MF0	132 aa		13.88	□□□□□ -0.19
FAM3A-222	ENST00000621967	TBX15	Q96SF7	602 aa		13.88	□□□□□ -0.19
FAM3A-222	ENST00000621967	HSPB9	Q9BQS6	159 aa		13.88	□□□□□ -0.19
FAM3A-222	ENST00000621967	IGHV4-61	A0A0C4DH41	118 aa		13.87	□□□□□ -0.19
FAM3A-222	ENST00000621967	MOS	P00540	346 aa		13.87	□□□□□ -0.19
FAM3A-222	ENST00000621967	COMP	P49747	757 aa	Predicted RBP	13.87	□□□□□ -0.19
FAM3A-222	ENST00000621967	SLC35B1	P78383	322 aa		13.87	□□□□□ -0.19
FAM3A-222	ENST00000621967	ZNF841	Q6ZN19	808 aa		13.87	□□□□□ -0.19
FAM3A-222	ENST00000621967	C7orf69	Q9H7B7	122 aa		13.87	□□□□□ -0.19
FAM3A-222	ENST00000621967	SERTAD4	Q9NUC0	356 aa		13.87	□□□□□ -0.19
FAM3A-222	ENST00000621967	SIGLEC9	Q9Y336	463 aa		13.87	□□□□□ -0.19
FAM3A-222	ENST00000621967	CORT	O00230	105 aa		13.86	□□□□□ -0.19
FAM3A-222	ENST00000621967	BMPR1B	O00238	502 aa		13.86	□□□□□ -0.19
FAM3A-222	ENST00000621967	CNTFR	P26992	372 aa		13.86	□□□□□ -0.19
FAM3A-222	ENST00000621967	BRS3	P32247	399 aa		13.86	□□□□□ -0.19
FAM3A-222	ENST00000621967	PRRX1	P54821	245 aa		13.86	□□□□□ -0.19
FAM3A-222	ENST00000621967	PLP1	P60201	277 aa		13.86	□□□□□ -0.19
FAM3A-222	ENST00000621967	TNXA	Q16473	311 aa		13.86	□□□□□ -0.19
FAM3A-222	ENST00000621967	TMEM183B	Q1AE95	376 aa		13.86	□□□□□ -0.19
FAM3A-222	ENST00000621967	HCP5	Q6MZN7	132 aa		13.86	□□□□□ -0.19
FAM3A-222	ENST00000621967	MRPL54	Q6P161	138 aa	Known RBP	13.86	□□□□□ -0.19
FAM3A-222	ENST00000621967	KRTAP1-3	Q8IUG1	177 aa		13.86	□□□□□ -0.19
FAM3A-222	ENST00000621967	IGHV1-3	A0A0C4DH29	117 aa		13.86	□□□□□ -0.19
FAM3A-222	ENST00000621967	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.86	□□□□□ -0.19
FAM3A-222	ENST00000621967	RBP4	P02753	201 aa		13.86	□□□□□ -0.19
FAM3A-222	ENST00000621967	ZNF705D	P0CH99	300 aa	Predicted RBP	13.86	□□□□□ -0.19
FAM3A-222	ENST00000621967	ZNF705B	P0CI00	300 aa	Predicted RBP	13.86	□□□□□ -0.19
FAM3A-222	ENST00000621967	CD33	P20138	364 aa		13.86	□□□□□ -0.19
FAM3A-222	ENST00000621967	C22orf15	Q8WYQ4	148 aa		13.86	□□□□□ -0.19
FAM3A-222	ENST00000621967	SMIM12	Q96EX1	92 aa		13.86	□□□□□ -0.19
FAM3A-222	ENST00000621967	KLF12	Q9Y4X4	402 aa		13.86	□□□□□ -0.19
FAM3A-222	ENST00000621967	TRAV34	A0A0B4J273	112 aa		13.85	□□□□□ -0.19
FAM3A-222	ENST00000621967	BUB1B-PAK6	H3BSN5	160 aa		13.85	□□□□□ -0.19
FAM3A-222	ENST00000621967	CA1	P00915	261 aa	Predicted RBP	13.85	□□□□□ -0.19
FAM3A-222	ENST00000621967	GPX1	P07203	203 aa		13.85	□□□□□ -0.19
FAM3A-222	ENST00000621967	TOMM20L	Q6UXN7	152 aa		13.85	□□□□□ -0.19
FAM3A-222	ENST00000621967	NUDT10	Q8NFP7	164 aa		13.85	□□□□□ -0.19
FAM3A-222	ENST00000621967	NUDT11	Q96G61	164 aa		13.85	□□□□□ -0.19
FAM3A-222	ENST00000621967	GRAMD2B	Q96HH9	432 aa		13.85	□□□□□ -0.19
FAM3A-222	ENST00000621967	SSBP3	Q9BWW4	388 aa	Predicted RBP	13.85	□□□□□ -0.19
FAM3A-222	ENST00000621967	CLEC7A	Q9BXN2	247 aa		13.85	□□□□□ -0.19
FAM3A-222	ENST00000621967	SAMD10	Q9BYL1	202 aa		13.85	□□□□□ -0.19
FAM3A-222	ENST00000621967	EPDR1	Q9UM22	224 aa		13.85	□□□□□ -0.19
FAM3A-222	ENST00000621967	PRRC2A	P48634	2157 aa	Known RBP	13.85	□□□□□ -0.19
FAM3A-222	ENST00000621967	TEX22	C9J3V5	150 aa		13.84	□□□□□ -0.19
FAM3A-222	ENST00000621967	ORM2	P19652	201 aa		13.84	□□□□□ -0.19
FAM3A-222	ENST00000621967	SST	P61278	116 aa		13.84	□□□□□ -0.19
FAM3A-222	ENST00000621967	KIAA1644	Q3SXP7	199 aa		13.84	□□□□□ -0.19
FAM3A-222	ENST00000621967	WFDC11	Q8NEX6	87 aa		13.84	□□□□□ -0.19
FAM3A-222	ENST00000621967	OR1B1	Q8NGR6	318 aa		13.84	□□□□□ -0.19
FAM3A-222	ENST00000621967	CHRDL1	Q9BU40	450 aa		13.84	□□□□□ -0.19
FAM3A-222	ENST00000621967	F11R	Q9Y624	299 aa	Known RBP	13.84	□□□□□ -0.19
FAM3A-222	ENST00000621967	RNF223	E7ERA6	249 aa		13.84	□□□□□ -0.19
FAM3A-222	ENST00000621967	EREG	O14944	169 aa		13.84	□□□□□ -0.19
FAM3A-222	ENST00000621967	GP9	P14770	177 aa		13.84	□□□□□ -0.19
FAM3A-222	ENST00000621967	SRI	P30626	198 aa		13.84	□□□□□ -0.19
FAM3A-222	ENST00000621967	DLX1	P56177	255 aa		13.84	□□□□□ -0.19
FAM3A-222	ENST00000621967	LMO4	P61968	165 aa		13.84	□□□□□ -0.19
FAM3A-222	ENST00000621967	GNG5	P63218	68 aa		13.84	□□□□□ -0.19
FAM3A-222	ENST00000621967	C19orf35	Q6ZS72	473 aa		13.84	□□□□□ -0.19
FAM3A-222	ENST00000621967	PPP1R27	Q86WC6	154 aa		13.84	□□□□□ -0.19
FAM3A-222	ENST00000621967	KCNS1	Q96KK3	526 aa		13.84	□□□□□ -0.19
FAM3A-222	ENST00000621967	C20orf144	Q9BQM9	153 aa		13.84	□□□□□ -0.19
FAM3A-222	ENST00000621967	INSIG2	Q9Y5U4	225 aa		13.84	□□□□□ -0.19
FAM3A-222	ENST00000621967	USF2	Q15853	346 aa	Predicted RBP	13.83	□□□□□ -0.2
FAM3A-222	ENST00000621967	SIGLECL1	Q8N7X8	197 aa		13.83	□□□□□ -0.2
FAM3A-222	ENST00000621967	C8orf46	Q8TAG6	207 aa		13.83	□□□□□ -0.2
FAM3A-222	ENST00000621967	RCHY1	Q96PM5	261 aa		13.83	□□□□□ -0.2
FAM3A-222	ENST00000621967	ZNF331	Q9NQX6	463 aa	Predicted RBP	13.83	□□□□□ -0.2
FAM3A-222	ENST00000621967	AKAP9	Q99996	3911 aa		13.83	□□□□□ -0.2
FAM3A-222	ENST00000621967	HYPM	O75409	117 aa		13.82	□□□□□ -0.2
FAM3A-222	ENST00000621967	APCS	P02743	223 aa		13.82	□□□□□ -0.2
FAM3A-222	ENST00000621967	NUP35	Q8NFH5	326 aa		13.82	□□□□□ -0.2
FAM3A-222	ENST00000621967	FBXL7	Q9UJT9	491 aa		13.82	□□□□□ -0.2
FAM3A-222	ENST00000621967	RNF114	Q9Y508	228 aa		13.82	□□□□□ -0.2
FAM3A-222	ENST00000621967	CREBBP	Q92793	2442 aa		13.82	□□□□□ -0.2
FAM3A-222	ENST00000621967	SETX	Q7Z333	2677 aa	Known RBP	13.82	□□□□□ -0.2
FAM3A-222	ENST00000621967		A0A1W2PS18	150 aa		13.82	□□□□□ -0.2
FAM3A-222	ENST00000621967	ZNF253	O75346	499 aa		13.82	□□□□□ -0.2
FAM3A-222	ENST00000621967	SLC25A5	P05141	298 aa	Known RBP	13.82	□□□□□ -0.2
FAM3A-222	ENST00000621967	NBEAP1	P0C6P0	100 aa		13.82	□□□□□ -0.2
FAM3A-222	ENST00000621967	HIST1H1E	P10412	219 aa	Known RBP	13.82	□□□□□ -0.2
FAM3A-222	ENST00000621967	UBE2G1	P62253	170 aa		13.82	□□□□□ -0.2
FAM3A-222	ENST00000621967	SLA	Q13239	276 aa		13.82	□□□□□ -0.2
FAM3A-222	ENST00000621967	ASPHD1	Q5U4P2	390 aa		13.82	□□□□□ -0.2
FAM3A-222	ENST00000621967	TSKU	Q8WUA8	353 aa		13.82	□□□□□ -0.2
FAM3A-222	ENST00000621967	MLST8	Q9BVC4	326 aa		13.82	□□□□□ -0.2
FAM3A-222	ENST00000621967	ABCA1	O95477	2261 aa		13.81	□□□□□ -0.2

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