RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 ZNF705BP0CI00 300 aaPredicted RBP16.87■□□□□ 0.29
LIME1-210ENST00000621325 I3L2K1 104 aa16.87■□□□□ 0.29
LIME1-210ENST00000621325 C5orf64Q2M2E5 130 aa16.87■□□□□ 0.29
LIME1-210ENST00000621325 TBX15Q96SF7 602 aa16.87■□□□□ 0.29
LIME1-210ENST00000621325 DOPEY1Q5JWR5 2465 aa16.87■□□□□ 0.29
LIME1-210ENST00000621325 TOX4O94842 621 aa16.86■□□□□ 0.29
LIME1-210ENST00000621325 FAM3BP58499 235 aaPredicted RBP16.86■□□□□ 0.29
LIME1-210ENST00000621325 OR2T10Q8NGZ9 312 aa16.86■□□□□ 0.29
LIME1-210ENST00000621325 SFRP2Q96HF1 295 aa16.86■□□□□ 0.29
LIME1-210ENST00000621325 USP24Q9UPU5 2620 aa16.86■□□□□ 0.29
LIME1-210ENST00000621325 PPBPP02775 128 aa16.86■□□□□ 0.29
LIME1-210ENST00000621325 KLF17Q5JT82 389 aaPredicted RBP16.86■□□□□ 0.29
LIME1-210ENST00000621325 VPS25Q9BRG1 176 aa16.86■□□□□ 0.29
LIME1-210ENST00000621325 PAXXQ9BUH6 204 aa16.86■□□□□ 0.29
LIME1-210ENST00000621325 SPG11Q96JI7 2443 aa16.85■□□□□ 0.29
LIME1-210ENST00000621325 A0A1W2PRE2 83 aa16.85■□□□□ 0.29
LIME1-210ENST00000621325 NCBP2LA6PVI3 153 aaKnown RBP16.85■□□□□ 0.29
LIME1-210ENST00000621325 CCDC144NLQ6NUI1 221 aa16.85■□□□□ 0.29
LIME1-210ENST00000621325 Q6ZVH6 145 aa16.85■□□□□ 0.29
LIME1-210ENST00000621325 VPS13CQ709C8 3753 aa16.85■□□□□ 0.29
LIME1-210ENST00000621325 CD99P14209 185 aa16.84■□□□□ 0.29
LIME1-210ENST00000621325 PDLIM4P50479 330 aa16.84■□□□□ 0.29
LIME1-210ENST00000621325 MINOS1Q5TGZ0 78 aa16.84■□□□□ 0.29
LIME1-210ENST00000621325 MINOS1-NBL1R4GNA1 71 aa16.84■□□□□ 0.29
LIME1-210ENST00000621325 IGLC1P0CG04 106 aa16.84■□□□□ 0.29
LIME1-210ENST00000621325 NDPQ00604 133 aa16.84■□□□□ 0.29
LIME1-210ENST00000621325 Q8N6K4 173 aa16.84■□□□□ 0.29
LIME1-210ENST00000621325 FXYD5Q96DB9 178 aa16.84■□□□□ 0.29
LIME1-210ENST00000621325 AJUBAQ96IF1 538 aa16.84■□□□□ 0.29
LIME1-210ENST00000621325 SRSF8Q9BRL6 282 aaKnown RBP16.84■□□□□ 0.29
LIME1-210ENST00000621325 MDFIC2A0A1B0GVS7 189 aa16.83■□□□□ 0.28
LIME1-210ENST00000621325 HELTA6NFD8 242 aa16.83■□□□□ 0.28
LIME1-210ENST00000621325 K7EIM0 57 aa16.83■□□□□ 0.28
LIME1-210ENST00000621325 CD33P20138 364 aa16.83■□□□□ 0.28
LIME1-210ENST00000621325 CX3CL1P78423 397 aa16.83■□□□□ 0.28
LIME1-210ENST00000621325 CENPWQ5EE01 88 aa16.83■□□□□ 0.28
LIME1-210ENST00000621325 CLUHP3Q96NS8 147 aa16.83■□□□□ 0.28
LIME1-210ENST00000621325 SRD5A3Q9H8P0 318 aa16.83■□□□□ 0.28
LIME1-210ENST00000621325 C9JCJ5 164 aa16.82■□□□□ 0.28
LIME1-210ENST00000621325 SRP14P37108 136 aaKnown RBP16.82■□□□□ 0.28
LIME1-210ENST00000621325 FAM120AOSQ5T036 256 aa16.82■□□□□ 0.28
LIME1-210ENST00000621325 ASPHD1Q5U4P2 390 aa16.82■□□□□ 0.28
LIME1-210ENST00000621325 STPG4Q8N801 248 aa16.82■□□□□ 0.28
LIME1-210ENST00000621325 CSTL1Q9H114 145 aa16.82■□□□□ 0.28
LIME1-210ENST00000621325 TIGITQ495A1 244 aa16.82■□□□□ 0.28
LIME1-210ENST00000621325 NUDT11Q96G61 164 aa16.82■□□□□ 0.28
LIME1-210ENST00000621325 RNF24Q9Y225 148 aa16.82■□□□□ 0.28
LIME1-210ENST00000621325 S4R3C0 116 aa16.82■□□□□ 0.28
LIME1-210ENST00000621325 A0A0U1RQK1 487 aa16.81■□□□□ 0.28
LIME1-210ENST00000621325 PSG1P11464 419 aa16.81■□□□□ 0.28
LIME1-210ENST00000621325 PERPQ96FX8 193 aa16.81■□□□□ 0.28
LIME1-210ENST00000621325 MYO18BQ8IUG5 2567 aa16.81■□□□□ 0.28
LIME1-210ENST00000621325 ABCA2Q9BZC7 2435 aa16.81■□□□□ 0.28
LIME1-210ENST00000621325 OOSP1A8MZH6 123 aa16.81■□□□□ 0.28
LIME1-210ENST00000621325 PPP5D1E7EU14 171 aa16.81■□□□□ 0.28
LIME1-210ENST00000621325 HYPMO75409 117 aa16.81■□□□□ 0.28
LIME1-210ENST00000621325 PRB1P04280 392 aa16.81■□□□□ 0.28
LIME1-210ENST00000621325 GNG4P50150 75 aa16.81■□□□□ 0.28
LIME1-210ENST00000621325 LINC00479Q96M42 142 aa16.81■□□□□ 0.28
LIME1-210ENST00000621325 IGKV1-17P01599 117 aa16.8■□□□□ 0.28
LIME1-210ENST00000621325 UBE2E1P51965 193 aa16.8■□□□□ 0.28
LIME1-210ENST00000621325 EBI3Q14213 229 aa16.8■□□□□ 0.28
LIME1-210ENST00000621325 OR10G8Q8NGN5 311 aa16.8■□□□□ 0.28
LIME1-210ENST00000621325 SGMS2Q8NHU3 365 aa16.8■□□□□ 0.28
LIME1-210ENST00000621325 C20orf144Q9BQM9 153 aa16.8■□□□□ 0.28
LIME1-210ENST00000621325 PAM16Q9Y3D7 125 aa16.8■□□□□ 0.28
LIME1-210ENST00000621325 SLC17A3O00476 420 aa16.8■□□□□ 0.28
LIME1-210ENST00000621325 SAA4P35542 130 aa16.8■□□□□ 0.28
LIME1-210ENST00000621325 UBE2V1Q13404 147 aa16.8■□□□□ 0.28
LIME1-210ENST00000621325 ZNF562Q6V9R5 426 aa16.8■□□□□ 0.28
LIME1-210ENST00000621325 ARPC1AQ92747 370 aa16.8■□□□□ 0.28
LIME1-210ENST00000621325 LYZP61626 148 aa16.79■□□□□ 0.28
LIME1-210ENST00000621325 KCNIP4Q6PIL6 250 aa16.79■□□□□ 0.28
LIME1-210ENST00000621325 BLNKQ8WV28 456 aa16.79■□□□□ 0.28
LIME1-210ENST00000621325 ZNF329Q86UD4 541 aa16.79■□□□□ 0.28
LIME1-210ENST00000621325 ORAOV1Q8WV07 137 aa16.79■□□□□ 0.28
LIME1-210ENST00000621325 CCL19Q99731 98 aa16.79■□□□□ 0.28
LIME1-210ENST00000621325 RANP62826 216 aaKnown RBP16.78■□□□□ 0.28
LIME1-210ENST00000621325 TOMM20LQ6UXN7 152 aa16.78■□□□□ 0.28
LIME1-210ENST00000621325 PIP4P2Q8N4L2 257 aa16.78■□□□□ 0.28
LIME1-210ENST00000621325 RASL11BQ9BPW5 248 aa16.78■□□□□ 0.28
LIME1-210ENST00000621325 LY96Q9Y6Y9 160 aa16.78■□□□□ 0.28
LIME1-210ENST00000621325 H3BTX0 84 aa16.78■□□□□ 0.28
LIME1-210ENST00000621325 PLP1P60201 277 aa16.78■□□□□ 0.28
LIME1-210ENST00000621325 FANCD2OSQ96PS1 177 aa16.78■□□□□ 0.28
LIME1-210ENST00000621325 TBL2Q9Y4P3 447 aaKnown RBP16.78■□□□□ 0.28
LIME1-210ENST00000621325 UTP20O75691 2785 aaKnown RBP16.78■□□□□ 0.28
LIME1-210ENST00000621325 A0A1B0GUS0 222 aa16.77■□□□□ 0.28
LIME1-210ENST00000621325 IGLV2-8P01709 118 aa16.77■□□□□ 0.27
LIME1-210ENST00000621325 IGF2BP2-AS1Q96M15 143 aa16.77■□□□□ 0.27
LIME1-210ENST00000621325 IGHV4-61A0A0C4DH41 118 aa16.76■□□□□ 0.27
LIME1-210ENST00000621325 GNG5P63218 68 aa16.76■□□□□ 0.27
LIME1-210ENST00000621325 FOXL1Q12952 345 aa16.76■□□□□ 0.27
LIME1-210ENST00000621325 Q8N9W7 124 aa16.76■□□□□ 0.27
LIME1-210ENST00000621325 NHLRC2Q8NBF2 726 aa16.76■□□□□ 0.27
LIME1-210ENST00000621325 MS4A10Q96PG2 267 aa16.76■□□□□ 0.27
LIME1-210ENST00000621325 ZNF320A2RRD8 509 aa16.76■□□□□ 0.27
LIME1-210ENST00000621325 TYMSP04818 313 aa16.76■□□□□ 0.27
LIME1-210ENST00000621325 GP9P14770 177 aa16.76■□□□□ 0.27
LIME1-210ENST00000621325 IMMP2LQ96T52 175 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms