RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 ZNF502Q8TBZ5 544 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 UBTD1Q9HAC8 227 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 PTPN13Q12923 2485 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 A6NDN8 102 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 J3QW42 95 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 CIDEAO60543 219 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 IGHV1-2P23083 117 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 ARF6P62330 175 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 EIF4EBP1Q13541 118 aaPredicted RBP5.68□□□□□ -1.5
NEDD9-216ENST00000620854 TM4SF20Q53R12 229 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 MBNL2Q5VZF2 373 aaKnown RBP5.68□□□□□ -1.5
NEDD9-216ENST00000620854 DUX4L9Q6RFH8 374 aaPredicted RBP5.68□□□□□ -1.5
NEDD9-216ENST00000620854 ASCL2Q99929 193 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 NAA38Q9BRA0 125 aaKnown RBP5.68□□□□□ -1.5
NEDD9-216ENST00000620854 JPT1Q9UK76 154 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 MALRD1Q5VYJ5 2156 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 ADAMTS20P59510 1910 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 LOC105371242A0A075B767 164 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 IGHV3-49A0A0A0MS15 119 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 HIGD1CA8MV81 97 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 IGKV1-16P04430 117 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 SPRNQ5BIV9 151 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 GCSAMQ8N6F7 178 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 WDR31Q8NA23 367 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 IDI2-AS1Q9NZ38 188 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 C2CD3Q4AC94 2353 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 DSCAMO60469 2012 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 TMEM189A5PLL7 270 aa5.67□□□□□ -1.5
NEDD9-216ENST00000620854 ESDP10768 282 aa5.67□□□□□ -1.5
NEDD9-216ENST00000620854 PSG1P11464 419 aa5.67□□□□□ -1.5
NEDD9-216ENST00000620854 PSMB2P49721 201 aa5.67□□□□□ -1.5
NEDD9-216ENST00000620854 RNFT1Q5M7Z0 435 aa5.67□□□□□ -1.5
NEDD9-216ENST00000620854 GDF5OSQ5U4N7 250 aa5.67□□□□□ -1.5
NEDD9-216ENST00000620854 SPATA12Q7Z6I5 190 aa5.67□□□□□ -1.5
NEDD9-216ENST00000620854 NEUROG1Q92886 237 aa5.67□□□□□ -1.5
NEDD9-216ENST00000620854 ZNF503Q96F45 646 aa5.67□□□□□ -1.5
NEDD9-216ENST00000620854 C18orf15Q96N68 181 aa5.67□□□□□ -1.5
NEDD9-216ENST00000620854 SLC25A33Q9BSK2 321 aa5.67□□□□□ -1.5
NEDD9-216ENST00000620854 RABAC1Q9UI14 185 aa5.67□□□□□ -1.5
NEDD9-216ENST00000620854 LSM4Q9Y4Z0 139 aaKnown RBP5.67□□□□□ -1.5
NEDD9-216ENST00000620854 FAM181BA6NEQ2 426 aa5.67□□□□□ -1.5
NEDD9-216ENST00000620854 H3BVH4 76 aa5.67□□□□□ -1.5
NEDD9-216ENST00000620854 K7ENP7 123 aa5.67□□□□□ -1.5
NEDD9-216ENST00000620854 AREGP15514 252 aa5.67□□□□□ -1.5
NEDD9-216ENST00000620854 C2orf83Q53S99 150 aa5.67□□□□□ -1.5
NEDD9-216ENST00000620854 LINC00305Q7Z4B0 112 aa5.67□□□□□ -1.5
NEDD9-216ENST00000620854 NUP35Q8NFH5 326 aa5.67□□□□□ -1.5
NEDD9-216ENST00000620854 SONP18583 2426 aaKnown RBP5.67□□□□□ -1.5
NEDD9-216ENST00000620854 CEP295Q9C0D2 2601 aa5.67□□□□□ -1.5
NEDD9-216ENST00000620854 C9JCJ5 164 aa5.67□□□□□ -1.5
NEDD9-216ENST00000620854 F2RL2O00254 374 aa5.67□□□□□ -1.5
NEDD9-216ENST00000620854 KIR2DL2P43627 348 aaPredicted RBP5.67□□□□□ -1.5
NEDD9-216ENST00000620854 OR10J3Q5JRS4 329 aa5.67□□□□□ -1.5
NEDD9-216ENST00000620854 AMMECR1LQ6DCA0 310 aa5.67□□□□□ -1.5
NEDD9-216ENST00000620854 TRAV9-2A0A087WT02 112 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 SAA2-SAA4A0A096LPE2 208 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 IGHV2OR16-5A0A0B4J2B6 119 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 H7C2G1 150 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 ZNF207O43670 478 aaKnown RBP5.66□□□□□ -1.5
NEDD9-216ENST00000620854 NBEAP1P0C6P0 100 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 SAA2P0DJI9 122 aaPredicted RBP5.66□□□□□ -1.5
NEDD9-216ENST00000620854 CCL3L1P16619 93 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 GLRXP35754 106 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 SSBP2P81877 361 aaPredicted RBP5.66□□□□□ -1.5
NEDD9-216ENST00000620854 NUDT10Q8NFP7 164 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 OR4A5Q8NH83 315 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 ORAOV1Q8WV07 137 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 NUDT11Q96G61 164 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 A0A087X0K7 114 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 PRSS46E5RG02 174 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 C15orf65H3BRN8 121 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 HLA-DRB1P01911 266 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 C12orf54Q6X4T0 127 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 OR4C13Q8NGP0 309 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 MYOZ3Q8TDC0 251 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 OSTCQ9NRP0 149 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 IGKV1D-17A0A075B6S4 117 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 TRBV9A0A0B4J1U6 114 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 LOC107984156A0A0G2JMH3 177 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 SRRM4A7MD48 611 aaKnown RBP5.66□□□□□ -1.5
NEDD9-216ENST00000620854 IGLV2-8P01709 118 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 IGHG3P01860 377 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 IL4P05112 153 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 MC5RP33032 325 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 ARL17AQ8IVW1 177 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 LINC01560Q8TB33 94 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 AP5S1Q9NUS5 200 aa5.66□□□□□ -1.5
NEDD9-216ENST00000620854 IZUMO1RA6ND01 250 aa5.65□□□□□ -1.5
NEDD9-216ENST00000620854 C15orf61A6NNL5 157 aa5.65□□□□□ -1.5
NEDD9-216ENST00000620854 IQCF6A8MYZ5 107 aa5.65□□□□□ -1.5
NEDD9-216ENST00000620854 PLP1P60201 277 aa5.65□□□□□ -1.5
NEDD9-216ENST00000620854 C10orf55Q5SWW7 151 aa5.65□□□□□ -1.5
NEDD9-216ENST00000620854 DGAT2L7PQ6IED9 249 aa5.65□□□□□ -1.5
NEDD9-216ENST00000620854 VKORC1Q9BQB6 163 aa5.65□□□□□ -1.5
NEDD9-216ENST00000620854 IFI27L2Q9H2X8 130 aa5.65□□□□□ -1.5
NEDD9-216ENST00000620854 FBXL15Q9H469 300 aa5.65□□□□□ -1.5
NEDD9-216ENST00000620854 ASH1LQ9NR48 2969 aaKnown RBP5.65□□□□□ -1.5
NEDD9-216ENST00000620854 ZZEF1O43149 2961 aa5.65□□□□□ -1.5
NEDD9-216ENST00000620854 MMP23AO75900 390 aa5.65□□□□□ -1.5
NEDD9-216ENST00000620854 IGHV3-23P01764 117 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 168.9 ms