RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 ZNF98A6NK75 572 aa9.27□□□□□ -0.93
CLIP1-219ENST00000620786 MPZP25189 248 aa9.27□□□□□ -0.93
CLIP1-219ENST00000620786 C1orf122Q6ZSJ8 110 aa9.27□□□□□ -0.93
CLIP1-219ENST00000620786 C5orf24Q7Z6I8 188 aa9.27□□□□□ -0.93
CLIP1-219ENST00000620786 LINC00477Q96M19 166 aa9.27□□□□□ -0.93
CLIP1-219ENST00000620786 LINC00473A8K010 186 aa9.26□□□□□ -0.93
CLIP1-219ENST00000620786 GHRHP01286 108 aa9.26□□□□□ -0.93
CLIP1-219ENST00000620786 DEFB104AQ8WTQ1 72 aa9.26□□□□□ -0.93
CLIP1-219ENST00000620786 MGST2Q99735 147 aa9.26□□□□□ -0.93
CLIP1-219ENST00000620786 OSTCQ9NRP0 149 aa9.26□□□□□ -0.93
CLIP1-219ENST00000620786 ANK1P16157 1881 aa9.26□□□□□ -0.93
CLIP1-219ENST00000620786 J3QLI3 93 aa9.26□□□□□ -0.93
CLIP1-219ENST00000620786 TNFSF13O75888 250 aa9.26□□□□□ -0.93
CLIP1-219ENST00000620786 GZMBP10144 247 aa9.26□□□□□ -0.93
CLIP1-219ENST00000620786 S100A7L2Q5SY68 101 aa9.26□□□□□ -0.93
CLIP1-219ENST00000620786 MDC1Q14676 2089 aaKnown RBP9.26□□□□□ -0.93
CLIP1-219ENST00000620786 RALGAPA1Q6GYQ0 2036 aa9.26□□□□□ -0.93
CLIP1-219ENST00000620786 LDLRAD4O15165 306 aa9.26□□□□□ -0.93
CLIP1-219ENST00000620786 PPBPP02775 128 aa9.26□□□□□ -0.93
CLIP1-219ENST00000620786 K7ERU9 68 aa9.26□□□□□ -0.93
CLIP1-219ENST00000620786 ATP6V0E1O15342 81 aa9.26□□□□□ -0.93
CLIP1-219ENST00000620786 HBDP02042 147 aa9.26□□□□□ -0.93
CLIP1-219ENST00000620786 ADMP35318 185 aa9.26□□□□□ -0.93
CLIP1-219ENST00000620786 DEFB131AP59861 70 aa9.26□□□□□ -0.93
CLIP1-219ENST00000620786 ZNF876PQ49A33 203 aa9.26□□□□□ -0.93
CLIP1-219ENST00000620786 BTCP35070 178 aa9.26□□□□□ -0.93
CLIP1-219ENST00000620786 PIP4P1Q86T03 277 aa9.26□□□□□ -0.93
CLIP1-219ENST00000620786 TMEM86BQ8N661 226 aa9.25□□□□□ -0.93
CLIP1-219ENST00000620786 PHLDA1Q8WV24 401 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-219ENST00000620786 TPRP12270 2363 aaKnown RBP9.25□□□□□ -0.93
CLIP1-219ENST00000620786 A0A0U1RRA0 63 aa9.25□□□□□ -0.93
CLIP1-219ENST00000620786 NAPSAO96009 420 aa9.25□□□□□ -0.93
CLIP1-219ENST00000620786 FOXL2NBQ6ZUU3 175 aa9.25□□□□□ -0.93
CLIP1-219ENST00000620786 OR5A1Q8NGJ0 315 aa9.25□□□□□ -0.93
CLIP1-219ENST00000620786 PGPEP1LA6NFU8 196 aa9.25□□□□□ -0.93
CLIP1-219ENST00000620786 TMEM249Q2WGJ8 235 aa9.25□□□□□ -0.93
CLIP1-219ENST00000620786 C14orf144Q96I85 54 aa9.25□□□□□ -0.93
CLIP1-219ENST00000620786 HEATR5BQ9P2D3 2071 aa9.25□□□□□ -0.93
CLIP1-219ENST00000620786 CEACAM8P31997 349 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-219ENST00000620786 SUPT4H1P63272 117 aaKnown RBP9.25□□□□□ -0.93
CLIP1-219ENST00000620786 OCC1Q8TAD7 63 aa9.25□□□□□ -0.93
CLIP1-219ENST00000620786 Q8TAT8 98 aa9.25□□□□□ -0.93
CLIP1-219ENST00000620786 A0A087WWC5 75 aa9.24□□□□□ -0.93
CLIP1-219ENST00000620786 TRAV2A0A0B4J234 112 aa9.24□□□□□ -0.93
CLIP1-219ENST00000620786 DPM2O94777 84 aa9.24□□□□□ -0.93
CLIP1-219ENST00000620786 TSKUQ8WUA8 353 aa9.24□□□□□ -0.93
CLIP1-219ENST00000620786 SH2D1AO60880 128 aa9.24□□□□□ -0.93
CLIP1-219ENST00000620786 CFHR2P36980 270 aa9.24□□□□□ -0.93
CLIP1-219ENST00000620786 LINC00205P59089 165 aa9.24□□□□□ -0.93
CLIP1-219ENST00000620786 REG4Q9BYZ8 158 aa9.24□□□□□ -0.93
CLIP1-219ENST00000620786 PLXNA3P51805 1871 aa9.24□□□□□ -0.93
CLIP1-219ENST00000620786 TRBV6-6A0A0A6YYG2 114 aa9.24□□□□□ -0.93
CLIP1-219ENST00000620786 CA1P00915 261 aaPredicted RBP9.24□□□□□ -0.93
CLIP1-219ENST00000620786 MCRIP2Q9BUT9 160 aaKnown RBP9.24□□□□□ -0.93
CLIP1-219ENST00000620786 CARHSP1Q9Y2V2 147 aaKnown RBP9.24□□□□□ -0.93
CLIP1-219ENST00000620786 SIP14410 1827 aa9.24□□□□□ -0.93
CLIP1-219ENST00000620786 IGKV1-5P01602 117 aa9.24□□□□□ -0.93
CLIP1-219ENST00000620786 ZNRD1Q9P1U0 126 aa9.24□□□□□ -0.93
CLIP1-219ENST00000620786 PRB1P04280 392 aa9.24□□□□□ -0.93
CLIP1-219ENST00000620786 LY6G6FQ5SQ64 297 aa9.24□□□□□ -0.93
CLIP1-219ENST00000620786 C1QL4Q86Z23 238 aa9.24□□□□□ -0.93
CLIP1-219ENST00000620786 CST9LQ9H4G1 147 aa9.24□□□□□ -0.93
CLIP1-219ENST00000620786 VWA8A3KMH1 1905 aa9.24□□□□□ -0.93
CLIP1-219ENST00000620786 LAGE3Q14657 143 aa9.23□□□□□ -0.93
CLIP1-219ENST00000620786 Q8TCH9 128 aa9.23□□□□□ -0.93
CLIP1-219ENST00000620786 TMEM190Q8WZ59 177 aa9.23□□□□□ -0.93
CLIP1-219ENST00000620786 IGHV4-39P01824 125 aa9.23□□□□□ -0.93
CLIP1-219ENST00000620786 DAD1P61803 113 aa9.23□□□□□ -0.93
CLIP1-219ENST00000620786 TTC32Q5I0X7 151 aa9.23□□□□□ -0.93
CLIP1-219ENST00000620786 RNF144BQ7Z419 303 aa9.23□□□□□ -0.93
CLIP1-219ENST00000620786 ZNF581Q9P0T4 197 aa9.23□□□□□ -0.93
CLIP1-219ENST00000620786 H0YIZ8 118 aa9.23□□□□□ -0.93
CLIP1-219ENST00000620786 ERCC8Q13216 396 aa9.23□□□□□ -0.93
CLIP1-219ENST00000620786 PSG3Q16557 428 aa9.23□□□□□ -0.93
CLIP1-219ENST00000620786 SRSF8Q9BRL6 282 aaKnown RBP9.23□□□□□ -0.93
CLIP1-219ENST00000620786 PRDM13Q9H4Q3 707 aa9.23□□□□□ -0.93
CLIP1-219ENST00000620786 CEP290O15078 2479 aa9.23□□□□□ -0.93
CLIP1-219ENST00000620786 LINC00614P0C842 121 aa9.23□□□□□ -0.93
CLIP1-219ENST00000620786 IFITM2Q01629 132 aa9.23□□□□□ -0.93
CLIP1-219ENST00000620786 TCF15Q12870 199 aa9.23□□□□□ -0.93
CLIP1-219ENST00000620786 F5H768 121 aa9.22□□□□□ -0.93
CLIP1-219ENST00000620786 NCR2O95944 276 aa9.22□□□□□ -0.93
CLIP1-219ENST00000620786 TCRAP04437 139 aa9.22□□□□□ -0.93
CLIP1-219ENST00000620786 DDTP30046 118 aa9.22□□□□□ -0.93
CLIP1-219ENST00000620786 PARD6GQ9BYG4 376 aaPredicted RBP9.22□□□□□ -0.93
CLIP1-219ENST00000620786 PAX2Q02962 417 aa9.22□□□□□ -0.93
CLIP1-219ENST00000620786 LYZL1Q6UWQ5 148 aa9.22□□□□□ -0.93
CLIP1-219ENST00000620786 SERF1AO75920 110 aa9.22□□□□□ -0.93
CLIP1-219ENST00000620786 IGKCP01834 107 aa9.22□□□□□ -0.93
CLIP1-219ENST00000620786 IGKV1-16P04430 117 aa9.22□□□□□ -0.93
CLIP1-219ENST00000620786 CFHR3Q02985 330 aa9.22□□□□□ -0.93
CLIP1-219ENST00000620786 ZDBF2Q9HCK1 2354 aa9.22□□□□□ -0.93
CLIP1-219ENST00000620786 XCL2Q9UBD3 114 aa9.22□□□□□ -0.93
CLIP1-219ENST00000620786 LSM4Q9Y4Z0 139 aaKnown RBP9.22□□□□□ -0.93
CLIP1-219ENST00000620786 HOXA3O43365 443 aaPredicted RBP9.22□□□□□ -0.93
CLIP1-219ENST00000620786 STAG3L3P0CL85 134 aa9.22□□□□□ -0.93
CLIP1-219ENST00000620786 CTAG1AP78358 180 aa9.22□□□□□ -0.93
CLIP1-219ENST00000620786 APOC4P55056 127 aa9.21□□□□□ -0.93
CLIP1-219ENST00000620786 MORN3Q6PF18 240 aaPredicted RBP9.21□□□□□ -0.93
CLIP1-219ENST00000620786 AHCTF1Q8WYP5 2266 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms