RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 MFFQ9GZY8 342 aa8.13□□□□□ -1.11
TARDBP-221ENST00000619555 TMEM231Q9H6L2 316 aa8.13□□□□□ -1.11
TARDBP-221ENST00000619555 LSM5Q9Y4Y9 91 aaKnown RBP8.13□□□□□ -1.11
TARDBP-221ENST00000619555 FAT2Q9NYQ8 4349 aa8.13□□□□□ -1.11
TARDBP-221ENST00000619555 KIAA1109Q2LD37 5005 aa8.13□□□□□ -1.11
TARDBP-221ENST00000619555 HECTD4Q9Y4D8 3996 aa8.12□□□□□ -1.11
TARDBP-221ENST00000619555 DYNC1H1Q14204 4646 aaKnown RBP8.12□□□□□ -1.11
TARDBP-221ENST00000619555 A0A1W2PS18 150 aa8.12□□□□□ -1.11
TARDBP-221ENST00000619555 KNCNA6PVL3 124 aa8.12□□□□□ -1.11
TARDBP-221ENST00000619555 K7EQG2 157 aa8.12□□□□□ -1.11
TARDBP-221ENST00000619555 GPX4P36969 197 aaPredicted RBP8.12□□□□□ -1.11
TARDBP-221ENST00000619555 P2RY1P47900 373 aa8.12□□□□□ -1.11
TARDBP-221ENST00000619555 H2BFSP57053 126 aa8.12□□□□□ -1.11
TARDBP-221ENST00000619555 RAB11AP62491 216 aa8.12□□□□□ -1.11
TARDBP-221ENST00000619555 PRR20EP86478 221 aa8.12□□□□□ -1.11
TARDBP-221ENST00000619555 PRR20CP86479 221 aa8.12□□□□□ -1.11
TARDBP-221ENST00000619555 PRR20DP86480 221 aa8.12□□□□□ -1.11
TARDBP-221ENST00000619555 PRR20BP86481 221 aa8.12□□□□□ -1.11
TARDBP-221ENST00000619555 PRR20AP86496 221 aa8.12□□□□□ -1.11
TARDBP-221ENST00000619555 ARL16Q0P5N6 197 aa8.12□□□□□ -1.11
TARDBP-221ENST00000619555 RAB32Q13637 225 aa8.12□□□□□ -1.11
TARDBP-221ENST00000619555 TMEM14EPQ6UXP3 125 aa8.12□□□□□ -1.11
TARDBP-221ENST00000619555 ACOT7LQ6ZUV0 252 aa8.12□□□□□ -1.11
TARDBP-221ENST00000619555 STHQ8IWL8 128 aa8.12□□□□□ -1.11
TARDBP-221ENST00000619555 OR1S2Q8NGQ3 325 aa8.12□□□□□ -1.11
TARDBP-221ENST00000619555 METTL26Q96S19 204 aa8.12□□□□□ -1.11
TARDBP-221ENST00000619555 RAB40CQ96S21 281 aa8.12□□□□□ -1.11
TARDBP-221ENST00000619555 STRAPQ9Y3F4 350 aaKnown RBP8.12□□□□□ -1.11
TARDBP-221ENST00000619555 TRAV30A0A087WSZ9 112 aa8.11□□□□□ -1.11
TARDBP-221ENST00000619555 TSC22D2O75157 780 aa8.11□□□□□ -1.11
TARDBP-221ENST00000619555 METTL15P1P0C7V9 234 aa8.11□□□□□ -1.11
TARDBP-221ENST00000619555 ZNF688P0C7X2 276 aa8.11□□□□□ -1.11
TARDBP-221ENST00000619555 RBMY1A1P0DJD3 496 aaKnown RBP8.11□□□□□ -1.11
TARDBP-221ENST00000619555 RBMY1CP0DJD4 496 aa8.11□□□□□ -1.11
TARDBP-221ENST00000619555 CRYBB3P26998 211 aa8.11□□□□□ -1.11
TARDBP-221ENST00000619555 RPP30P78346 268 aaKnown RBP8.11□□□□□ -1.11
TARDBP-221ENST00000619555 ZNF90Q03938 601 aa8.11□□□□□ -1.11
TARDBP-221ENST00000619555 RBMY1FQ15415 496 aaKnown RBP8.11□□□□□ -1.11
TARDBP-221ENST00000619555 OR8G2PQ6IF36 304 aa8.11□□□□□ -1.11
TARDBP-221ENST00000619555 TRPT1Q86TN4 253 aaKnown RBP8.11□□□□□ -1.11
TARDBP-221ENST00000619555 Q8NAQ8 132 aa8.11□□□□□ -1.11
TARDBP-221ENST00000619555 C2CD4CQ8TF44 421 aa8.11□□□□□ -1.11
TARDBP-221ENST00000619555 ALG5Q9Y673 324 aa8.11□□□□□ -1.11
TARDBP-221ENST00000619555 DNAH11Q96DT5 4516 aa8.11□□□□□ -1.11
TARDBP-221ENST00000619555 IGHV4-28A0A0C4DH34 117 aa8.1□□□□□ -1.11
TARDBP-221ENST00000619555 TOMM40O96008 361 aa8.1□□□□□ -1.11
TARDBP-221ENST00000619555 PSG1P11464 419 aa8.1□□□□□ -1.11
TARDBP-221ENST00000619555 C4BPBP20851 252 aa8.1□□□□□ -1.11
TARDBP-221ENST00000619555 TAS2R30P59541 319 aa8.1□□□□□ -1.11
TARDBP-221ENST00000619555 S100A10P60903 97 aa8.1□□□□□ -1.11
TARDBP-221ENST00000619555 YPEL3P61236 119 aaPredicted RBP8.1□□□□□ -1.11
TARDBP-221ENST00000619555 USF2Q15853 346 aaPredicted RBP8.1□□□□□ -1.11
TARDBP-221ENST00000619555 ACTL10Q5JWF8 245 aa8.1□□□□□ -1.11
TARDBP-221ENST00000619555 TMEM182Q6ZP80 229 aaPredicted RBP8.1□□□□□ -1.11
TARDBP-221ENST00000619555 THAP8Q8NA92 274 aa8.1□□□□□ -1.11
TARDBP-221ENST00000619555 DCANP1Q8TF63 244 aa8.1□□□□□ -1.11
TARDBP-221ENST00000619555 GRAMD2BQ96HH9 432 aa8.1□□□□□ -1.11
TARDBP-221ENST00000619555 SLC35E1Q96K37 410 aa8.1□□□□□ -1.11
TARDBP-221ENST00000619555 KRTAP17-1Q9BYP8 105 aa8.1□□□□□ -1.11
TARDBP-221ENST00000619555 CLEC5AQ9NY25 188 aa8.1□□□□□ -1.11
TARDBP-221ENST00000619555 APLNQ9ULZ1 77 aa8.1□□□□□ -1.11
TARDBP-221ENST00000619555 U3KQE9 123 aa8.1□□□□□ -1.11
TARDBP-221ENST00000619555 FAM24AA6NFZ4 105 aa8.09□□□□□ -1.11
TARDBP-221ENST00000619555 ZFP92A6NM28 416 aa8.09□□□□□ -1.11
TARDBP-221ENST00000619555 IGLL5B9A064 214 aa8.09□□□□□ -1.11
TARDBP-221ENST00000619555 H0YIZ8 118 aa8.09□□□□□ -1.11
TARDBP-221ENST00000619555 IL4P05112 153 aa8.09□□□□□ -1.11
TARDBP-221ENST00000619555 RRAS2P62070 204 aaPredicted RBP8.09□□□□□ -1.11
TARDBP-221ENST00000619555 NARS2Q96I59 477 aaKnown RBP8.09□□□□□ -1.11
TARDBP-221ENST00000619555 NMES1Q9C002 83 aa8.09□□□□□ -1.11
TARDBP-221ENST00000619555 OR5AC2Q9NZP5 309 aa8.09□□□□□ -1.11
TARDBP-221ENST00000619555 MGAT4CQ9UBM8 478 aa8.09□□□□□ -1.11
TARDBP-221ENST00000619555 X6R8D5 127 aa8.09□□□□□ -1.11
TARDBP-221ENST00000619555 ELOA3CA0A087WX78 387 aaPredicted RBP8.08□□□□□ -1.12
TARDBP-221ENST00000619555 IGSF23A1L1A6 192 aa8.08□□□□□ -1.12
TARDBP-221ENST00000619555 SSNA1O43805 119 aa8.08□□□□□ -1.12
TARDBP-221ENST00000619555 SCGB2A1O75556 95 aa8.08□□□□□ -1.12
TARDBP-221ENST00000619555 RD3LP0DJH9 198 aa8.08□□□□□ -1.12
TARDBP-221ENST00000619555 SPP1P10451 314 aa8.08□□□□□ -1.12
TARDBP-221ENST00000619555 CXCL3P19876 107 aa8.08□□□□□ -1.12
TARDBP-221ENST00000619555 GATA2P23769 480 aaPredicted RBP8.08□□□□□ -1.12
TARDBP-221ENST00000619555 HLA-DMBP28068 263 aa8.08□□□□□ -1.12
TARDBP-221ENST00000619555 OR2F1Q13607 317 aa8.08□□□□□ -1.12
TARDBP-221ENST00000619555 OXA1LQ15070 435 aa8.08□□□□□ -1.12
TARDBP-221ENST00000619555 LRRC37A5PQ49AS3 106 aa8.08□□□□□ -1.12
TARDBP-221ENST00000619555 MORN3Q6PF18 240 aaPredicted RBP8.08□□□□□ -1.12
TARDBP-221ENST00000619555 C16orf54Q6UWD8 224 aa8.08□□□□□ -1.12
TARDBP-221ENST00000619555 OR51G1Q8NGK1 321 aa8.08□□□□□ -1.12
TARDBP-221ENST00000619555 Q8WTZ3 238 aa8.08□□□□□ -1.12
TARDBP-221ENST00000619555 TRGV9Q99603 122 aa8.08□□□□□ -1.12
TARDBP-221ENST00000619555 HRH4Q9H3N8 390 aa8.08□□□□□ -1.12
TARDBP-221ENST00000619555 ZNF705EA8MWA4 302 aaPredicted RBP8.07□□□□□ -1.12
TARDBP-221ENST00000619555 L7N2F9 121 aa8.07□□□□□ -1.12
TARDBP-221ENST00000619555 CST7O76096 145 aa8.07□□□□□ -1.12
TARDBP-221ENST00000619555 HNRNPCP07910 306 aaKnown RBP eCLIP8.07□□□□□ -1.12
TARDBP-221ENST00000619555 MIFP14174 115 aa8.07□□□□□ -1.12
TARDBP-221ENST00000619555 BCAP31P51572 246 aa8.07□□□□□ -1.12
TARDBP-221ENST00000619555 CAV2P51636 162 aa8.07□□□□□ -1.12
TARDBP-221ENST00000619555 TCTAP57738 103 aa8.07□□□□□ -1.12
TARDBP-221ENST00000619555 VAMP2P63027 116 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms