RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 PRR20CP86479 221 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 PRR20DP86480 221 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 PRR20BP86481 221 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 PRR20AP86496 221 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 PRCDQ00LT1 54 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 C11orf53Q8IXP5 236 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 OR9G1Q8NH87 305 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 ZNF430Q9H8G1 570 aaPredicted RBP5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 IDI2-AS1Q9NZ38 188 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 A0A1W2PRX2 142 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 SMIM27A0A1W2PRY6 76 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 C15orf65H3BRN8 121 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 PLAUP00749 431 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 SLAQ13239 276 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 SPRNQ5BIV9 151 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 Q8N7P7 452 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 OR8B3Q8NGG8 313 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 CCL17Q92583 94 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 SLC25A33Q9BSK2 321 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 TPPP3Q9BW30 176 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 RNF7Q9UBF6 113 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 HSPB8Q9UJY1 196 aa5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 RALYQ9UKM9 306 aaKnown RBP5.67□□□□□ -1.5
SRGAP3-213ENST00000618999 K7ERU9 68 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 CSN3P07498 182 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 OR1B1Q8NGR6 318 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 OR10X1Q8NGY0 326 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 VSTM2AQ8TAG5 236 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 TMEM14BQ9NUH8 114 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 CLEC5AQ9NY25 188 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 IGHV2-26A0A0B4J1V2 119 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 hADV38S2A0JD32 116 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 PGPA6NDG6 321 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 C17orf100A8MU93 164 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 E7EQL1 145 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 UPK2O00526 184 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 CCL25O15444 150 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 MYOD1P15172 320 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 APOBEC3AP31941 199 aaPredicted RBP5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 FA2HQ7L5A8 372 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 NIT1Q86X76 327 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 NUP35Q8NFH5 326 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 NUDT10Q8NFP7 164 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 CACNG8Q8WXS5 425 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 NUDT11Q96G61 164 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 SGK494Q96LW2 274 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 ST20Q9HBF5 79 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 ZNF257Q9Y2Q1 563 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 KBTBD11-OT1A0A1B0GTJ5 212 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 PRSS29PA6NIE9 313 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 SRRM5B3KS81 715 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 ITGB1BP1O14713 200 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 PYYP10082 97 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 COL8A1P27658 744 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 ATP5L2Q7Z4Y8 100 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 MOB3BQ86TA1 216 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 PGLYRP4Q96LB8 373 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 YAE1D1Q9NRH1 226 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 KALRNO60229 2985 aa5.66□□□□□ -1.5
SRGAP3-213ENST00000618999 TRAV5A0A0B4J249 113 aa5.65□□□□□ -1.5
SRGAP3-213ENST00000618999 ENSAO43768 121 aaKnown RBP5.65□□□□□ -1.5
SRGAP3-213ENST00000618999 LIPFP07098 398 aa5.65□□□□□ -1.5
SRGAP3-213ENST00000618999 CTRLP40313 264 aa5.65□□□□□ -1.5
SRGAP3-213ENST00000618999 FBXL19-AS1Q494R0 122 aa5.65□□□□□ -1.5
SRGAP3-213ENST00000618999 MUC15Q8N387 334 aa5.65□□□□□ -1.5
SRGAP3-213ENST00000618999 NPIPB3Q92617 1050 aa5.65□□□□□ -1.5
SRGAP3-213ENST00000618999 FLYWCH2Q96CP2 140 aaKnown RBP5.65□□□□□ -1.5
SRGAP3-213ENST00000618999 LINC00479Q96M42 142 aa5.65□□□□□ -1.5
SRGAP3-213ENST00000618999 TNFRSF19Q9NS68 423 aa5.65□□□□□ -1.5
SRGAP3-213ENST00000618999 NBEAQ8NFP9 2946 aa5.65□□□□□ -1.51
SRGAP3-213ENST00000618999 TRAV30A0A087WSZ9 112 aa5.65□□□□□ -1.51
SRGAP3-213ENST00000618999 PRB1P04280 392 aa5.65□□□□□ -1.51
SRGAP3-213ENST00000618999 OR5AL1P0C617 328 aa5.65□□□□□ -1.51
SRGAP3-213ENST00000618999 IGLL1P15814 213 aa5.65□□□□□ -1.51
SRGAP3-213ENST00000618999 COMPP49747 757 aaPredicted RBP5.65□□□□□ -1.51
SRGAP3-213ENST00000618999 VMA21Q3ZAQ7 101 aa5.65□□□□□ -1.51
SRGAP3-213ENST00000618999 C2orf83Q53S99 150 aa5.65□□□□□ -1.51
SRGAP3-213ENST00000618999 BPIFA4PQ86YQ2 179 aa5.65□□□□□ -1.51
SRGAP3-213ENST00000618999 Q8TCH9 128 aa5.65□□□□□ -1.51
SRGAP3-213ENST00000618999 H1FXQ92522 213 aaKnown RBP5.65□□□□□ -1.51
SRGAP3-213ENST00000618999 RELNP78509 3460 aa5.65□□□□□ -1.51
SRGAP3-213ENST00000618999 IGKV1D-17A0A075B6S4 117 aa5.65□□□□□ -1.51
SRGAP3-213ENST00000618999 SHISA9B4DS77 424 aa5.65□□□□□ -1.51
SRGAP3-213ENST00000618999 HLA-DRB1P01911 266 aa5.65□□□□□ -1.51
SRGAP3-213ENST00000618999 MPV17L2Q567V2 206 aa5.65□□□□□ -1.51
SRGAP3-213ENST00000618999 LDLRAD2Q5SZI1 272 aa5.65□□□□□ -1.51
SRGAP3-213ENST00000618999 Q6ZVH6 145 aa5.65□□□□□ -1.51
SRGAP3-213ENST00000618999 TCF24Q7RTU0 167 aa5.65□□□□□ -1.51
SRGAP3-213ENST00000618999 PRSS3P2Q8NHM4 247 aa5.65□□□□□ -1.51
SRGAP3-213ENST00000618999 RNASE8Q8TDE3 154 aaKnown RBP5.65□□□□□ -1.51
SRGAP3-213ENST00000618999 RPP21Q9H633 154 aaKnown RBP5.65□□□□□ -1.51
SRGAP3-213ENST00000618999 RNF114Q9Y508 228 aa5.65□□□□□ -1.51
SRGAP3-213ENST00000618999 SOX21Q9Y651 276 aaPredicted RBP5.65□□□□□ -1.51
SRGAP3-213ENST00000618999 BSNQ9UPA5 3926 aa5.64□□□□□ -1.51
SRGAP3-213ENST00000618999 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.64□□□□□ -1.51
SRGAP3-213ENST00000618999 PRSS46E5RG02 174 aa5.64□□□□□ -1.51
SRGAP3-213ENST00000618999 K7EQM0 130 aa5.64□□□□□ -1.51
SRGAP3-213ENST00000618999 IGHV3-48P01763 117 aa5.64□□□□□ -1.51
SRGAP3-213ENST00000618999 SAA1P0DJI8 122 aaPredicted RBP5.64□□□□□ -1.51
SRGAP3-213ENST00000618999 CSN1S1P47710 185 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms