RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 TNFRSF13BO14836 293 aaPredicted RBP16.29■□□□□ 0.2
NEK3-208ENST00000618534 RPL27AP46776 148 aaKnown RBP16.29■□□□□ 0.2
NEK3-208ENST00000618534 LGALS7P47929 136 aa16.29■□□□□ 0.2
NEK3-208ENST00000618534 FAM57AQ8TBR7 257 aa16.29■□□□□ 0.2
NEK3-208ENST00000618534 TRAV8-1A0A0A6YYK1 113 aa16.28■□□□□ 0.2
NEK3-208ENST00000618534 OR4C46A6NHA9 309 aa16.28■□□□□ 0.2
NEK3-208ENST00000618534 CCL25O15444 150 aa16.28■□□□□ 0.2
NEK3-208ENST00000618534 TMEM155Q4W5P6 130 aa16.28■□□□□ 0.2
NEK3-208ENST00000618534 SOX21Q9Y651 276 aaPredicted RBP16.28■□□□□ 0.2
NEK3-208ENST00000618534 IGHV1-8P0DP01 117 aa16.28■□□□□ 0.2
NEK3-208ENST00000618534 DLX1P56177 255 aa16.28■□□□□ 0.2
NEK3-208ENST00000618534 FAM162BQ5T6X4 162 aa16.28■□□□□ 0.2
NEK3-208ENST00000618534 RBPMS2Q6ZRY4 209 aaKnown RBP16.28■□□□□ 0.2
NEK3-208ENST00000618534 Q71RC1 249 aaPredicted RBP16.28■□□□□ 0.2
NEK3-208ENST00000618534 DAZAP1Q96EP5 407 aaKnown RBP16.28■□□□□ 0.2
NEK3-208ENST00000618534 PKDREJQ9NTG1 2253 aa16.28■□□□□ 0.2
NEK3-208ENST00000618534 MGAQ8IWI9 3026 aa16.28■□□□□ 0.2
NEK3-208ENST00000618534 CUL9Q8IWT3 2517 aa16.27■□□□□ 0.2
NEK3-208ENST00000618534 OTOGLQ3ZCN5 2332 aa16.27■□□□□ 0.2
NEK3-208ENST00000618534 C16orf97H3BN30 126 aa16.27■□□□□ 0.2
NEK3-208ENST00000618534 MUC15Q8N387 334 aa16.27■□□□□ 0.2
NEK3-208ENST00000618534 C8orf46Q8TAG6 207 aa16.27■□□□□ 0.2
NEK3-208ENST00000618534 COX11Q9Y6N1 276 aa16.27■□□□□ 0.2
NEK3-208ENST00000618534 PTTG1IPP53801 180 aa16.27■□□□□ 0.19
NEK3-208ENST00000618534 PRB3Q04118 309 aaPredicted RBP16.27■□□□□ 0.19
NEK3-208ENST00000618534 Q86TA4 180 aa16.27■□□□□ 0.19
NEK3-208ENST00000618534 TEX45Q8NA69 505 aa16.27■□□□□ 0.19
NEK3-208ENST00000618534 CHCHD1Q96BP2 118 aaKnown RBP16.27■□□□□ 0.19
NEK3-208ENST00000618534 CRXO43186 299 aaPredicted RBP16.26■□□□□ 0.19
NEK3-208ENST00000618534 THBDP07204 575 aa16.26■□□□□ 0.19
NEK3-208ENST00000618534 CIARTQ8N365 385 aaPredicted RBP16.26■□□□□ 0.19
NEK3-208ENST00000618534 GFRA4Q9GZZ7 299 aa16.26■□□□□ 0.19
NEK3-208ENST00000618534 CBY1Q9Y3M2 126 aa16.26■□□□□ 0.19
NEK3-208ENST00000618534 IGHV1-69-2A0A0G2JMI3 117 aa16.26■□□□□ 0.19
NEK3-208ENST00000618534 A0A0G2JNJ9 132 aa16.26■□□□□ 0.19
NEK3-208ENST00000618534 SYS1-DBNDD2H3BUS1 97 aa16.26■□□□□ 0.19
NEK3-208ENST00000618534 TOX4O94842 621 aa16.26■□□□□ 0.19
NEK3-208ENST00000618534 LYZP61626 148 aa16.26■□□□□ 0.19
NEK3-208ENST00000618534 Q9UFV3 132 aa16.26■□□□□ 0.19
NEK3-208ENST00000618534 HIGD1AQ9Y241 93 aa16.26■□□□□ 0.19
NEK3-208ENST00000618534 DMXL1Q9Y485 3027 aa16.25■□□□□ 0.19
NEK3-208ENST00000618534 LEPROTL1O95214 131 aa16.25■□□□□ 0.19
NEK3-208ENST00000618534 PLP1P60201 277 aa16.25■□□□□ 0.19
NEK3-208ENST00000618534 MAP1BP46821 2468 aaKnown RBP16.25■□□□□ 0.19
NEK3-208ENST00000618534 LOC102724200A0A096LPH7 203 aaPredicted RBP16.25■□□□□ 0.19
NEK3-208ENST00000618534 CHEK1O14757 476 aa16.25■□□□□ 0.19
NEK3-208ENST00000618534 TMEM133Q9H2Q1 129 aa16.25■□□□□ 0.19
NEK3-208ENST00000618534 hDV102S1A0JD36 115 aa16.24■□□□□ 0.19
NEK3-208ENST00000618534 NPIPB6E9PJ23 425 aa16.24■□□□□ 0.19
NEK3-208ENST00000618534 CRYGBP07316 175 aa16.24■□□□□ 0.19
NEK3-208ENST00000618534 COL8A1P27658 744 aa16.24■□□□□ 0.19
NEK3-208ENST00000618534 EXOC3-AS1Q8N2X6 119 aa16.24■□□□□ 0.19
NEK3-208ENST00000618534 ZNF738Q8NE65 137 aa16.24■□□□□ 0.19
NEK3-208ENST00000618534 PRSS33Q8NF86 280 aa16.24■□□□□ 0.19
NEK3-208ENST00000618534 C1RLQ9NZP8 487 aa16.24■□□□□ 0.19
NEK3-208ENST00000618534 SIGLEC9Q9Y336 463 aa16.24■□□□□ 0.19
NEK3-208ENST00000618534 ABCA1O95477 2261 aa16.24■□□□□ 0.19
NEK3-208ENST00000618534 PSG1P11464 419 aa16.24■□□□□ 0.19
NEK3-208ENST00000618534 ZNF138P52744 262 aa16.24■□□□□ 0.19
NEK3-208ENST00000618534 GOLT1AQ6ZVE7 132 aa16.24■□□□□ 0.19
NEK3-208ENST00000618534 ASCL5Q7RTU5 278 aa16.24■□□□□ 0.19
NEK3-208ENST00000618534 OTORQ9NRC9 128 aa16.24■□□□□ 0.19
NEK3-208ENST00000618534 F11RQ9Y624 299 aaKnown RBP16.24■□□□□ 0.19
NEK3-208ENST00000618534 PRNTQ86SH4 94 aa16.23■□□□□ 0.19
NEK3-208ENST00000618534 DCHS1Q96JQ0 3298 aa16.23■□□□□ 0.19
NEK3-208ENST00000618534 TEX22C9J3V5 150 aa16.23■□□□□ 0.19
NEK3-208ENST00000618534 IGLV2-11P01706 119 aa16.23■□□□□ 0.19
NEK3-208ENST00000618534 IGF2-ASQ6U949 168 aa16.23■□□□□ 0.19
NEK3-208ENST00000618534 ST20Q9HBF5 79 aa16.23■□□□□ 0.19
NEK3-208ENST00000618534 APOHP02749 345 aaPredicted RBP16.22■□□□□ 0.19
NEK3-208ENST00000618534 IGLC1P0CG04 106 aa16.22■□□□□ 0.19
NEK3-208ENST00000618534 UBE2V1Q13404 147 aa16.22■□□□□ 0.19
NEK3-208ENST00000618534 SLC25A39Q9BZJ4 359 aaPredicted RBP16.22■□□□□ 0.19
NEK3-208ENST00000618534 MALRD1Q5VYJ5 2156 aa16.22■□□□□ 0.19
NEK3-208ENST00000618534 FAM231BA6NCW3 169 aa16.21■□□□□ 0.19
NEK3-208ENST00000618534 RNASE6Q93091 150 aaKnown RBP16.21■□□□□ 0.19
NEK3-208ENST00000618534 NDFIP1Q9BT67 221 aa16.21■□□□□ 0.19
NEK3-208ENST00000618534 KAAG1Q9UBP8 84 aa16.21■□□□□ 0.19
NEK3-208ENST00000618534 PAX2Q02962 417 aa16.2■□□□□ 0.18
NEK3-208ENST00000618534 MCRIP2Q9BUT9 160 aaKnown RBP16.2■□□□□ 0.18
NEK3-208ENST00000618534 SH3BGRL2Q9UJC5 107 aa16.2■□□□□ 0.18
NEK3-208ENST00000618534 OVOL3O00110 214 aa16.2■□□□□ 0.18
NEK3-208ENST00000618534 HAX1O00165 279 aa16.2■□□□□ 0.18
NEK3-208ENST00000618534 PRB4P10163 310 aaPredicted RBP16.2■□□□□ 0.18
NEK3-208ENST00000618534 PPP1R27Q86WC6 154 aa16.2■□□□□ 0.18
NEK3-208ENST00000618534 ASCL2Q99929 193 aa16.2■□□□□ 0.18
NEK3-208ENST00000618534 DYNLRB1Q9NP97 96 aa16.2■□□□□ 0.18
NEK3-208ENST00000618534 TMEM14CQ9P0S9 112 aa16.2■□□□□ 0.18
NEK3-208ENST00000618534 ZNF785A8K8V0 405 aa16.19■□□□□ 0.18
NEK3-208ENST00000618534 LIPFP07098 398 aa16.19■□□□□ 0.18
NEK3-208ENST00000618534 MPV17L2Q567V2 206 aa16.19■□□□□ 0.18
NEK3-208ENST00000618534 FBXL15Q9H469 300 aa16.19■□□□□ 0.18
NEK3-208ENST00000618534 INSIG2Q9Y5U4 225 aa16.19■□□□□ 0.18
NEK3-208ENST00000618534 PCNX1Q96RV3 2341 aa16.19■□□□□ 0.18
NEK3-208ENST00000618534 KALRNO60229 2985 aa16.19■□□□□ 0.18
NEK3-208ENST00000618534 ADGRG4Q8IZF6 3080 aa16.19■□□□□ 0.18
NEK3-208ENST00000618534 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.19■□□□□ 0.18
NEK3-208ENST00000618534 IGHV1-3A0A0C4DH29 117 aa16.19■□□□□ 0.18
NEK3-208ENST00000618534 HOXB4P17483 251 aaPredicted RBP16.19■□□□□ 0.18
NEK3-208ENST00000618534 C16orf54Q6UWD8 224 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms