RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 MAP1LC3CQ9BXW4 147 aa8.78□□□□□ -1
POLR2A-209ENST00000617998 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.78□□□□□ -1
POLR2A-209ENST00000617998 TMEM252Q8N6L7 170 aa8.78□□□□□ -1
POLR2A-209ENST00000617998 CYB561D1Q8N8Q1 229 aa8.78□□□□□ -1
POLR2A-209ENST00000617998 VAX2Q9UIW0 290 aa8.78□□□□□ -1
POLR2A-209ENST00000617998 GATA2P23769 480 aaPredicted RBP8.77□□□□□ -1
POLR2A-209ENST00000617998 TAS2R60P59551 318 aa8.77□□□□□ -1
POLR2A-209ENST00000617998 SIGIRRQ6IA17 410 aa8.77□□□□□ -1
POLR2A-209ENST00000617998 NUDT10Q8NFP7 164 aa8.77□□□□□ -1
POLR2A-209ENST00000617998 A0A1B0GW64 132 aa8.77□□□□□ -1.01
POLR2A-209ENST00000617998 ARL14EPLP0DKL9 152 aa8.77□□□□□ -1.01
POLR2A-209ENST00000617998 DEFB135Q30KP9 77 aa8.77□□□□□ -1.01
POLR2A-209ENST00000617998 Q9H3A6 140 aa8.77□□□□□ -1.01
POLR2A-209ENST00000617998 SRSF9Q13242 221 aaKnown RBP eCLIP8.77□□□□□ -1.01
POLR2A-209ENST00000617998 ZNRD1Q9P1U0 126 aa8.77□□□□□ -1.01
POLR2A-209ENST00000617998 IGKV1OR2-108A0A075B7D4 117 aa8.77□□□□□ -1.01
POLR2A-209ENST00000617998 HLA-DQB1P01920 261 aa8.77□□□□□ -1.01
POLR2A-209ENST00000617998 PRB2P02812 416 aaPredicted RBP8.77□□□□□ -1.01
POLR2A-209ENST00000617998 LINC00477Q96M19 166 aa8.77□□□□□ -1.01
POLR2A-209ENST00000617998 TNFSF18Q9UNG2 199 aa8.77□□□□□ -1.01
POLR2A-209ENST00000617998 A0A096LPF7 62 aa8.77□□□□□ -1.01
POLR2A-209ENST00000617998 CDK2AP2O75956 126 aa8.77□□□□□ -1.01
POLR2A-209ENST00000617998 APCSP02743 223 aa8.77□□□□□ -1.01
POLR2A-209ENST00000617998 BAK1Q16611 211 aa8.77□□□□□ -1.01
POLR2A-209ENST00000617998 ZNF705AQ6ZN79 300 aaPredicted RBP8.77□□□□□ -1.01
POLR2A-209ENST00000617998 OR10C1Q96KK4 312 aa8.77□□□□□ -1.01
POLR2A-209ENST00000617998 C11orf68Q9H3H3 251 aaKnown RBP8.77□□□□□ -1.01
POLR2A-209ENST00000617998 IGKV3D-20A0A0C4DH25 116 aa8.76□□□□□ -1.01
POLR2A-209ENST00000617998 WIPF2Q8TF74 440 aaPredicted RBP8.76□□□□□ -1.01
POLR2A-209ENST00000617998 SPAG8Q99932 426 aaPredicted RBP8.76□□□□□ -1.01
POLR2A-209ENST00000617998 FUT9Q9Y231 359 aa8.76□□□□□ -1.01
POLR2A-209ENST00000617998 NAV2Q8IVL1 2488 aa8.76□□□□□ -1.01
POLR2A-209ENST00000617998 KRTAP10-9P60411 292 aa8.76□□□□□ -1.01
POLR2A-209ENST00000617998 SPINK13Q1W4C9 94 aa8.76□□□□□ -1.01
POLR2A-209ENST00000617998 VOPP1Q96AW1 172 aa8.76□□□□□ -1.01
POLR2A-209ENST00000617998 COQ2Q96H96 371 aa8.76□□□□□ -1.01
POLR2A-209ENST00000617998 TBX15Q96SF7 602 aa8.76□□□□□ -1.01
POLR2A-209ENST00000617998 AZU1P20160 251 aa8.76□□□□□ -1.01
POLR2A-209ENST00000617998 PSG3Q16557 428 aa8.76□□□□□ -1.01
POLR2A-209ENST00000617998 HIST1H2BAQ96A08 127 aa8.76□□□□□ -1.01
POLR2A-209ENST00000617998 TP53RKQ96S44 253 aa8.76□□□□□ -1.01
POLR2A-209ENST00000617998 SPRY2O43597 315 aa8.76□□□□□ -1.01
POLR2A-209ENST00000617998 GGTLC3B5MD39 225 aa8.75□□□□□ -1.01
POLR2A-209ENST00000617998 CNTFRP26992 372 aa8.75□□□□□ -1.01
POLR2A-209ENST00000617998 CDX1P47902 265 aaPredicted RBP8.75□□□□□ -1.01
POLR2A-209ENST00000617998 IBA57Q5T440 356 aaKnown RBP8.75□□□□□ -1.01
POLR2A-209ENST00000617998 SPATA31B1PQ5VZV4 182 aa8.75□□□□□ -1.01
POLR2A-209ENST00000617998 OR8A1Q8NGG7 326 aa8.75□□□□□ -1.01
POLR2A-209ENST00000617998 C4orf3Q8WVX3 66 aa8.75□□□□□ -1.01
POLR2A-209ENST00000617998 TM2D2Q9BX73 214 aa8.75□□□□□ -1.01
POLR2A-209ENST00000617998 OTORQ9NRC9 128 aa8.75□□□□□ -1.01
POLR2A-209ENST00000617998 OR5AC2Q9NZP5 309 aa8.75□□□□□ -1.01
POLR2A-209ENST00000617998 LDLRAD4O15165 306 aa8.75□□□□□ -1.01
POLR2A-209ENST00000617998 NMUP48645 174 aa8.75□□□□□ -1.01
POLR2A-209ENST00000617998 SS18Q15532 418 aa8.75□□□□□ -1.01
POLR2A-209ENST00000617998 HIST3H3Q16695 136 aa8.75□□□□□ -1.01
POLR2A-209ENST00000617998 RFNGQ9Y644 331 aa8.75□□□□□ -1.01
POLR2A-209ENST00000617998 PRRC2AP48634 2157 aaKnown RBP8.75□□□□□ -1.01
POLR2A-209ENST00000617998 IGKV1-9A0A0C4DH69 117 aa8.75□□□□□ -1.01
POLR2A-209ENST00000617998 ATP5G1P05496 136 aa8.75□□□□□ -1.01
POLR2A-209ENST00000617998 GZMBP10144 247 aa8.75□□□□□ -1.01
POLR2A-209ENST00000617998 ATP5G3P48201 142 aa8.75□□□□□ -1.01
POLR2A-209ENST00000617998 ZNF680Q8NEM1 530 aa8.75□□□□□ -1.01
POLR2A-209ENST00000617998 NAT8Q9UHE5 227 aa8.75□□□□□ -1.01
POLR2A-209ENST00000617998 TGIF2-C20orf24A0A0A6YYL0 155 aa8.75□□□□□ -1.01
POLR2A-209ENST00000617998 CRYBB3P26998 211 aa8.75□□□□□ -1.01
POLR2A-209ENST00000617998 CCKARP32238 428 aa8.75□□□□□ -1.01
POLR2A-209ENST00000617998 SUPT4H1P63272 117 aaKnown RBP8.75□□□□□ -1.01
POLR2A-209ENST00000617998 LGALS3P17931 250 aaKnown RBP8.74□□□□□ -1.01
POLR2A-209ENST00000617998 ZNF79Q15937 498 aa8.74□□□□□ -1.01
POLR2A-209ENST00000617998 TEX261Q6UWH6 196 aa8.74□□□□□ -1.01
POLR2A-209ENST00000617998 RUNX1Q01196 453 aa8.74□□□□□ -1.01
POLR2A-209ENST00000617998 COX19Q49B96 90 aa8.74□□□□□ -1.01
POLR2A-209ENST00000617998 ATP6V0CP27449 155 aa8.74□□□□□ -1.01
POLR2A-209ENST00000617998 FASNP49327 2511 aaKnown RBP8.74□□□□□ -1.01
POLR2A-209ENST00000617998 KRTDAPP60985 99 aa8.74□□□□□ -1.01
POLR2A-209ENST00000617998 Q6YL49 198 aa8.74□□□□□ -1.01
POLR2A-209ENST00000617998 ST20Q9HBF5 79 aa8.74□□□□□ -1.01
POLR2A-209ENST00000617998 AURKAIP1Q9NWT8 199 aaPredicted RBP8.74□□□□□ -1.01
POLR2A-209ENST00000617998 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.74□□□□□ -1.01
POLR2A-209ENST00000617998 ATP5LO75964 103 aa8.74□□□□□ -1.01
POLR2A-209ENST00000617998 OR5A1Q8NGJ0 315 aa8.74□□□□□ -1.01
POLR2A-209ENST00000617998 NDUFAF3Q9BU61 184 aa8.74□□□□□ -1.01
POLR2A-209ENST00000617998 HIST1H3AP68431 136 aa8.73□□□□□ -1.01
POLR2A-209ENST00000617998 TNFRSF13BO14836 293 aaPredicted RBP8.73□□□□□ -1.01
POLR2A-209ENST00000617998 BSXQ3C1V8 233 aa8.73□□□□□ -1.01
POLR2A-209ENST00000617998 PDZD11Q5EBL8 140 aa8.73□□□□□ -1.01
POLR2A-209ENST00000617998 ELF5Q9UKW6 265 aaPredicted RBP8.73□□□□□ -1.01
POLR2A-209ENST00000617998 IGKV1-12A0A0C4DH73 117 aa8.73□□□□□ -1.01
POLR2A-209ENST00000617998 MUC21A0A0G2JKD1 596 aa8.73□□□□□ -1.01
POLR2A-209ENST00000617998 MUC21A0A140T8X8 626 aa8.73□□□□□ -1.01
POLR2A-209ENST00000617998 IGKV1D-12P01611 117 aa8.73□□□□□ -1.01
POLR2A-209ENST00000617998 RND3P61587 244 aa8.73□□□□□ -1.01
POLR2A-209ENST00000617998 ZFAND2BQ8WV99 257 aa8.73□□□□□ -1.01
POLR2A-209ENST00000617998 FHITP49789 147 aa8.73□□□□□ -1.01
POLR2A-209ENST00000617998 FOXL2NBQ6ZUU3 175 aa8.73□□□□□ -1.01
POLR2A-209ENST00000617998 CTSZQ9UBR2 303 aa8.73□□□□□ -1.01
POLR2A-209ENST00000617998 CD200R1LQ6Q8B3 271 aa8.73□□□□□ -1.01
POLR2A-209ENST00000617998 Q6P435 159 aa8.72□□□□□ -1.01
POLR2A-209ENST00000617998 GAGE12JA6NER3 117 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms