RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 BMPR1BO00238 502 aa9.04□□□□□ -0.96
PDPN-211ENST00000617617 TCTEX1D4Q5JR98 221 aa9.04□□□□□ -0.96
PDPN-211ENST00000617617 TOMM20LQ6UXN7 152 aa9.04□□□□□ -0.96
PDPN-211ENST00000617617 OR5AU1Q8NGC0 362 aa9.04□□□□□ -0.96
PDPN-211ENST00000617617 SLC25A22Q9H936 323 aa9.04□□□□□ -0.96
PDPN-211ENST00000617617 MANBALQ9NQG1 85 aa9.04□□□□□ -0.96
PDPN-211ENST00000617617 K7EMT4 169 aa9.03□□□□□ -0.96
PDPN-211ENST00000617617 IGHV3-23P01764 117 aa9.03□□□□□ -0.96
PDPN-211ENST00000617617 C1orf194Q5T5A4 169 aa9.03□□□□□ -0.96
PDPN-211ENST00000617617 FAM78BQ5VT40 261 aa9.03□□□□□ -0.96
PDPN-211ENST00000617617 C10orf99Q6UWK7 81 aa9.03□□□□□ -0.96
PDPN-211ENST00000617617 REC114Q7Z4M0 266 aa9.03□□□□□ -0.96
PDPN-211ENST00000617617 COMMD7Q86VX2 200 aa9.03□□□□□ -0.96
PDPN-211ENST00000617617 TXNDC17Q9BRA2 123 aa9.03□□□□□ -0.96
PDPN-211ENST00000617617 HRH4Q9H3N8 390 aa9.03□□□□□ -0.96
PDPN-211ENST00000617617 S4R3C0 116 aa9.03□□□□□ -0.96
PDPN-211ENST00000617617 FLNBO75369 2602 aaKnown RBP9.03□□□□□ -0.96
PDPN-211ENST00000617617 NOTCH2Q04721 2471 aa9.03□□□□□ -0.96
PDPN-211ENST00000617617 LGALS9O00182 355 aa9.03□□□□□ -0.96
PDPN-211ENST00000617617 CD5P06127 495 aa9.03□□□□□ -0.96
PDPN-211ENST00000617617 MIR17HGQ75NE6 70 aa9.03□□□□□ -0.96
PDPN-211ENST00000617617 LINC00305Q7Z4B0 112 aa9.03□□□□□ -0.96
PDPN-211ENST00000617617 OR1B1Q8NGR6 318 aa9.03□□□□□ -0.96
PDPN-211ENST00000617617 SLC25A39Q9BZJ4 359 aaPredicted RBP9.03□□□□□ -0.96
PDPN-211ENST00000617617 HSPB1P04792 205 aaKnown RBP9.02□□□□□ -0.97
PDPN-211ENST00000617617 IL4P05112 153 aa9.02□□□□□ -0.97
PDPN-211ENST00000617617 CRYBB3P26998 211 aa9.02□□□□□ -0.97
PDPN-211ENST00000617617 USF2Q15853 346 aaPredicted RBP9.02□□□□□ -0.97
PDPN-211ENST00000617617 ZNF506Q5JVG8 444 aa9.02□□□□□ -0.97
PDPN-211ENST00000617617 PCNPQ8WW12 178 aaKnown RBP9.02□□□□□ -0.97
PDPN-211ENST00000617617 ZNF503Q96F45 646 aa9.02□□□□□ -0.97
PDPN-211ENST00000617617 PBDC1Q9BVG4 233 aa9.02□□□□□ -0.97
PDPN-211ENST00000617617 GNB4Q9HAV0 340 aa9.02□□□□□ -0.97
PDPN-211ENST00000617617 TMEM167BQ9NRX6 74 aa9.02□□□□□ -0.97
PDPN-211ENST00000617617 PUS1Q9Y606 427 aaKnown RBP eCLIP9.02□□□□□ -0.97
PDPN-211ENST00000617617 FN1P02751 2386 aaKnown RBP9.02□□□□□ -0.97
PDPN-211ENST00000617617 LYZP61626 148 aa9.02□□□□□ -0.97
PDPN-211ENST00000617617 SPATA31B1PQ5VZV4 182 aa9.02□□□□□ -0.97
PDPN-211ENST00000617617 GPR82Q96P67 336 aa9.02□□□□□ -0.97
PDPN-211ENST00000617617 RABAC1Q9UI14 185 aa9.02□□□□□ -0.97
PDPN-211ENST00000617617 A8MWP6 167 aa9.01□□□□□ -0.97
PDPN-211ENST00000617617 MRPS12O15235 138 aaKnown RBP9.01□□□□□ -0.97
PDPN-211ENST00000617617 IFNA1P01562 189 aa9.01□□□□□ -0.97
PDPN-211ENST00000617617 ARL14EPLP0DKL9 152 aa9.01□□□□□ -0.97
PDPN-211ENST00000617617 GCHFRP30047 84 aa9.01□□□□□ -0.97
PDPN-211ENST00000617617 CCL20P78556 96 aa9.01□□□□□ -0.97
PDPN-211ENST00000617617 LOC102723971A0A1B0GUV8 181 aa9.01□□□□□ -0.97
PDPN-211ENST00000617617 PPP5D1E7EU14 171 aa9.01□□□□□ -0.97
PDPN-211ENST00000617617 TRBV12-3P01733 135 aa9.01□□□□□ -0.97
PDPN-211ENST00000617617 GP9P14770 177 aa9.01□□□□□ -0.97
PDPN-211ENST00000617617 ORM2P19652 201 aa9.01□□□□□ -0.97
PDPN-211ENST00000617617 LCN15Q6UWW0 184 aa9.01□□□□□ -0.97
PDPN-211ENST00000617617 RNF114Q9Y508 228 aa9.01□□□□□ -0.97
PDPN-211ENST00000617617 SETXQ7Z333 2677 aaKnown RBP9.01□□□□□ -0.97
PDPN-211ENST00000617617 RBFOX3A6NFN3 312 aa9□□□□□ -0.97
PDPN-211ENST00000617617 BCL2P10415 239 aa9□□□□□ -0.97
PDPN-211ENST00000617617 MORN5Q5VZ52 161 aa9□□□□□ -0.97
PDPN-211ENST00000617617 TCEAL7Q9BRU2 100 aa9□□□□□ -0.97
PDPN-211ENST00000617617 TSSC4Q9Y5U2 329 aaPredicted RBP9□□□□□ -0.97
PDPN-211ENST00000617617 A0A087X0K7 114 aa8.99□□□□□ -0.97
PDPN-211ENST00000617617 ZP3P21754 424 aa8.99□□□□□ -0.97
PDPN-211ENST00000617617 FHL3Q13643 280 aa8.99□□□□□ -0.97
PDPN-211ENST00000617617 PEA15Q15121 130 aa8.99□□□□□ -0.97
PDPN-211ENST00000617617 GUK1Q16774 197 aa8.99□□□□□ -0.97
PDPN-211ENST00000617617 LCNL1Q6ZST4 164 aa8.99□□□□□ -0.97
PDPN-211ENST00000617617 FXYD5Q96DB9 178 aa8.99□□□□□ -0.97
PDPN-211ENST00000617617 NKX6-2Q9C056 277 aaPredicted RBP8.99□□□□□ -0.97
PDPN-211ENST00000617617 OR51M1Q9H341 326 aa8.99□□□□□ -0.97
PDPN-211ENST00000617617 VAX2Q9UIW0 290 aa8.99□□□□□ -0.97
PDPN-211ENST00000617617 ZNF98A6NK75 572 aa8.99□□□□□ -0.97
PDPN-211ENST00000617617 IGHV3-11P01762 117 aa8.99□□□□□ -0.97
PDPN-211ENST00000617617 FGF8P55075 233 aaPredicted RBP8.99□□□□□ -0.97
PDPN-211ENST00000617617 FAM106AQ4KMX7 169 aa8.99□□□□□ -0.97
PDPN-211ENST00000617617 METTL26Q96S19 204 aa8.99□□□□□ -0.97
PDPN-211ENST00000617617 DOK5Q9P104 306 aa8.99□□□□□ -0.97
PDPN-211ENST00000617617 F8P00451 2351 aa8.99□□□□□ -0.97
PDPN-211ENST00000617617 A0A1W2PRE2 83 aa8.99□□□□□ -0.97
PDPN-211ENST00000617617 BUB3O43684 328 aa8.99□□□□□ -0.97
PDPN-211ENST00000617617 ZNF253O75346 499 aa8.99□□□□□ -0.97
PDPN-211ENST00000617617 IGLC2P0DOY2 106 aa8.99□□□□□ -0.97
PDPN-211ENST00000617617 KLF5Q13887 457 aaPredicted RBP8.99□□□□□ -0.97
PDPN-211ENST00000617617 C1QL4Q86Z23 238 aa8.99□□□□□ -0.97
PDPN-211ENST00000617617 UHRF2Q96PU4 802 aa8.99□□□□□ -0.97
PDPN-211ENST00000617617 PAXXQ9BUH6 204 aa8.99□□□□□ -0.97
PDPN-211ENST00000617617 UFC1Q9Y3C8 167 aa8.99□□□□□ -0.97
PDPN-211ENST00000617617 MEOX2P50222 304 aa8.98□□□□□ -0.97
PDPN-211ENST00000617617 FOXL1Q12952 345 aa8.98□□□□□ -0.97
PDPN-211ENST00000617617 PDE6HQ13956 83 aa8.98□□□□□ -0.97
PDPN-211ENST00000617617 ICAM4Q14773 271 aa8.98□□□□□ -0.97
PDPN-211ENST00000617617 ARL6IP6Q8N6S5 226 aa8.98□□□□□ -0.97
PDPN-211ENST00000617617 HIST1H1EP10412 219 aaKnown RBP8.98□□□□□ -0.97
PDPN-211ENST00000617617 C10orf91Q5T1B1 145 aa8.98□□□□□ -0.97
PDPN-211ENST00000617617 BPIFA4PQ86YQ2 179 aa8.98□□□□□ -0.97
PDPN-211ENST00000617617 LYPD1Q8N2G4 141 aa8.98□□□□□ -0.97
PDPN-211ENST00000617617 TRAV5A0A0B4J249 113 aa8.97□□□□□ -0.97
PDPN-211ENST00000617617 LINC01619G3V211 115 aa8.97□□□□□ -0.97
PDPN-211ENST00000617617 RPL7P18124 248 aaKnown RBP8.97□□□□□ -0.97
PDPN-211ENST00000617617 NPPCP23582 126 aa8.97□□□□□ -0.97
PDPN-211ENST00000617617 MYCNOSP40205 109 aa8.97□□□□□ -0.97
PDPN-211ENST00000617617 C16orf54Q6UWD8 224 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms