RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 NRN1Q9NPD7 142 aa12.49□□□□□ -0.41
LHX1-202ENST00000616237 RYR3Q15413 4870 aa12.49□□□□□ -0.41
LHX1-202ENST00000616237 CFDP00746 253 aaPredicted RBP12.48□□□□□ -0.41
LHX1-202ENST00000616237 CYP2G1PQ6ZSU1 146 aa12.48□□□□□ -0.41
LHX1-202ENST00000616237 OR10P1Q8NGE3 313 aa12.48□□□□□ -0.41
LHX1-202ENST00000616237 FNDC10F2Z333 226 aa12.47□□□□□ -0.41
LHX1-202ENST00000616237 INMT-MINDY4F8WBC2 141 aa12.47□□□□□ -0.41
LHX1-202ENST00000616237 ORM2P19652 201 aa12.47□□□□□ -0.41
LHX1-202ENST00000616237 NUP62P37198 522 aaPredicted RBP12.47□□□□□ -0.41
LHX1-202ENST00000616237 RAB32Q13637 225 aa12.47□□□□□ -0.41
LHX1-202ENST00000616237 PSMG4Q5JS54 123 aa12.47□□□□□ -0.41
LHX1-202ENST00000616237 C1orf194Q5T5A4 169 aa12.47□□□□□ -0.41
LHX1-202ENST00000616237 TRPT1Q86TN4 253 aaKnown RBP12.47□□□□□ -0.41
LHX1-202ENST00000616237 BPIFCQ8NFQ6 507 aa12.47□□□□□ -0.41
LHX1-202ENST00000616237 C17orf77Q96MU5 243 aa12.47□□□□□ -0.41
LHX1-202ENST00000616237 MARVELD1Q9BSK0 173 aa12.47□□□□□ -0.41
LHX1-202ENST00000616237 FAM24AA6NFZ4 105 aa12.46□□□□□ -0.41
LHX1-202ENST00000616237 L7N2F9 121 aa12.46□□□□□ -0.41
LHX1-202ENST00000616237 SOCS3O14543 225 aa12.46□□□□□ -0.41
LHX1-202ENST00000616237 SIX6O95475 246 aa12.46□□□□□ -0.41
LHX1-202ENST00000616237 GIG44P09565 113 aaPredicted RBP12.46□□□□□ -0.41
LHX1-202ENST00000616237 VAMP2P63027 116 aa12.46□□□□□ -0.41
LHX1-202ENST00000616237 EWSR1Q01844 656 aaKnown RBP eCLIP12.46□□□□□ -0.41
LHX1-202ENST00000616237 NPVFQ9HCQ7 196 aa12.46□□□□□ -0.41
LHX1-202ENST00000616237 PFDN2Q9UHV9 154 aa12.46□□□□□ -0.41
LHX1-202ENST00000616237 ZNF98A6NK75 572 aa12.45□□□□□ -0.42
LHX1-202ENST00000616237 DEDDO75618 318 aa12.45□□□□□ -0.42
LHX1-202ENST00000616237 SLC38A11Q08AI6 406 aa12.45□□□□□ -0.42
LHX1-202ENST00000616237 ACTL10Q5JWF8 245 aa12.45□□□□□ -0.42
LHX1-202ENST00000616237 STHQ8IWL8 128 aa12.45□□□□□ -0.42
LHX1-202ENST00000616237 OR1B1Q8NGR6 318 aa12.45□□□□□ -0.42
LHX1-202ENST00000616237 PPP1R14BQ96C90 147 aa12.45□□□□□ -0.42
LHX1-202ENST00000616237 SLC25A32Q9H2D1 315 aa12.45□□□□□ -0.42
LHX1-202ENST00000616237 GPN1Q9HCN4 374 aaPredicted RBP12.45□□□□□ -0.42
LHX1-202ENST00000616237 SEPSECSQ9HD40 501 aaKnown RBP12.45□□□□□ -0.42
LHX1-202ENST00000616237 MGAT4CQ9UBM8 478 aa12.45□□□□□ -0.42
LHX1-202ENST00000616237 SLC45A2Q9UMX9 530 aa12.45□□□□□ -0.42
LHX1-202ENST00000616237 TENM2Q9NT68 2774 aa12.44□□□□□ -0.42
LHX1-202ENST00000616237 A0A0J9YWU9 116 aa12.44□□□□□ -0.42
LHX1-202ENST00000616237 CST7O76096 145 aa12.44□□□□□ -0.42
LHX1-202ENST00000616237 CA1P00915 261 aaPredicted RBP12.44□□□□□ -0.42
LHX1-202ENST00000616237 BCAP31P51572 246 aa12.44□□□□□ -0.42
LHX1-202ENST00000616237 CAV2P51636 162 aa12.44□□□□□ -0.42
LHX1-202ENST00000616237 DEFB1P60022 68 aa12.44□□□□□ -0.42
LHX1-202ENST00000616237 PLP1P60201 277 aa12.44□□□□□ -0.42
LHX1-202ENST00000616237 S100A10P60903 97 aa12.44□□□□□ -0.42
LHX1-202ENST00000616237 OR8I2Q8N0Y5 310 aa12.44□□□□□ -0.42
LHX1-202ENST00000616237 GGACTQ9BVM4 153 aa12.44□□□□□ -0.42
LHX1-202ENST00000616237 SCRT1Q9BWW7 348 aa12.44□□□□□ -0.42
LHX1-202ENST00000616237 SLC25A22Q9H936 323 aa12.44□□□□□ -0.42
LHX1-202ENST00000616237 DOK5Q9P104 306 aa12.44□□□□□ -0.42
LHX1-202ENST00000616237 FBXL17Q9UF56 701 aa12.44□□□□□ -0.42
LHX1-202ENST00000616237 PRAF2O60831 178 aa12.43□□□□□ -0.42
LHX1-202ENST00000616237 LINC00869P0C866 280 aa12.43□□□□□ -0.42
LHX1-202ENST00000616237 C4BPBP20851 252 aa12.43□□□□□ -0.42
LHX1-202ENST00000616237 TEPPQ6URK8 271 aa12.43□□□□□ -0.42
LHX1-202ENST00000616237 TMEM147Q9BVK8 224 aa12.43□□□□□ -0.42
LHX1-202ENST00000616237 IGSF23A1L1A6 192 aa12.43□□□□□ -0.42
LHX1-202ENST00000616237 H3BRN7 92 aa12.43□□□□□ -0.42
LHX1-202ENST00000616237 GOSR2O14653 212 aa12.43□□□□□ -0.42
LHX1-202ENST00000616237 DEFA1P59665 94 aa12.43□□□□□ -0.42
LHX1-202ENST00000616237 DEFA3P59666 94 aa12.43□□□□□ -0.42
LHX1-202ENST00000616237 SNRPD3P62318 126 aaKnown RBP12.43□□□□□ -0.42
LHX1-202ENST00000616237 SELENOTP62341 195 aa12.43□□□□□ -0.42
LHX1-202ENST00000616237 GDF5OSQ5U4N7 250 aa12.43□□□□□ -0.42
LHX1-202ENST00000616237 PATE2Q6UY27 113 aa12.43□□□□□ -0.42
LHX1-202ENST00000616237 TMEM252Q8N6L7 170 aa12.43□□□□□ -0.42
LHX1-202ENST00000616237 TMEM217Q8N7C4 229 aa12.43□□□□□ -0.42
LHX1-202ENST00000616237 MGST2Q99735 147 aa12.43□□□□□ -0.42
LHX1-202ENST00000616237 SLC25A39Q9BZJ4 359 aaPredicted RBP12.43□□□□□ -0.42
LHX1-202ENST00000616237 LYRM2Q9NU23 88 aaPredicted RBP12.43□□□□□ -0.42
LHX1-202ENST00000616237 PLECQ15149 4684 aaKnown RBP12.42□□□□□ -0.42
LHX1-202ENST00000616237 AGPAT2O15120 278 aa12.42□□□□□ -0.42
LHX1-202ENST00000616237 GATAD1Q8WUU5 269 aa12.42□□□□□ -0.42
LHX1-202ENST00000616237 UHRF2Q96PU4 802 aa12.42□□□□□ -0.42
LHX1-202ENST00000616237 LYSTQ99698 3801 aa12.42□□□□□ -0.42
LHX1-202ENST00000616237 SHANK2-AS3Q9BTD1 123 aa12.42□□□□□ -0.42
LHX1-202ENST00000616237 H3BMM0 161 aa12.41□□□□□ -0.42
LHX1-202ENST00000616237 HYPMO75409 117 aa12.41□□□□□ -0.42
LHX1-202ENST00000616237 PVALBP20472 110 aaPredicted RBP12.41□□□□□ -0.42
LHX1-202ENST00000616237 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.41□□□□□ -0.42
LHX1-202ENST00000616237 OR11H2Q8NH07 326 aa12.41□□□□□ -0.42
LHX1-202ENST00000616237 IL17DQ8TAD2 202 aa12.41□□□□□ -0.42
LHX1-202ENST00000616237 C20orf173Q96LM9 149 aa12.41□□□□□ -0.42
LHX1-202ENST00000616237 LINC00052Q96N35 136 aa12.41□□□□□ -0.42
LHX1-202ENST00000616237 RARRES2Q99969 163 aa12.41□□□□□ -0.42
LHX1-202ENST00000616237 RSG1Q9BU20 258 aa12.41□□□□□ -0.42
LHX1-202ENST00000616237 ARL6Q9H0F7 186 aa12.41□□□□□ -0.42
LHX1-202ENST00000616237 HIGD1AQ9Y241 93 aa12.41□□□□□ -0.42
LHX1-202ENST00000616237 H0YIZ8 118 aa12.4□□□□□ -0.42
LHX1-202ENST00000616237 OR5G3P0C626 314 aa12.4□□□□□ -0.42
LHX1-202ENST00000616237 SPP1P10451 314 aa12.4□□□□□ -0.42
LHX1-202ENST00000616237 GALR1P47211 349 aa12.4□□□□□ -0.42
LHX1-202ENST00000616237 PSMB3P49720 205 aa12.4□□□□□ -0.42
LHX1-202ENST00000616237 SULT1A1P50225 295 aa12.4□□□□□ -0.42
LHX1-202ENST00000616237 H2BFSP57053 126 aa12.4□□□□□ -0.42
LHX1-202ENST00000616237 RAP2BP61225 183 aa12.4□□□□□ -0.42
LHX1-202ENST00000616237 VWC2Q2TAL6 325 aa12.4□□□□□ -0.42
LHX1-202ENST00000616237 MORN3Q6PF18 240 aaPredicted RBP12.4□□□□□ -0.42
LHX1-202ENST00000616237 NMES1Q9C002 83 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms