RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 ARPC1AQ92747 370 aa12.72□□□□□ -0.37
SYNRG-223ENST00000616179 JMJD8Q96S16 334 aa12.72□□□□□ -0.37
SYNRG-223ENST00000616179 C1RLQ9NZP8 487 aa12.72□□□□□ -0.37
SYNRG-223ENST00000616179 PCNX2A6NKB5 2137 aa12.72□□□□□ -0.37
SYNRG-223ENST00000616179 IGKV1OR2-108A0A075B7D4 117 aa12.72□□□□□ -0.37
SYNRG-223ENST00000616179 NRN1LQ496H8 165 aa12.72□□□□□ -0.37
SYNRG-223ENST00000616179 CELSR3Q9NYQ7 3312 aa12.72□□□□□ -0.37
SYNRG-223ENST00000616179 H3BMG7 143 aa12.72□□□□□ -0.37
SYNRG-223ENST00000616179 FCGR2BP31994 310 aaPredicted RBP12.72□□□□□ -0.37
SYNRG-223ENST00000616179 SLC25A2Q9BXI2 301 aa12.72□□□□□ -0.37
SYNRG-223ENST00000616179 ATG2AQ2TAZ0 1938 aa12.71□□□□□ -0.37
SYNRG-223ENST00000616179 UPK2O00526 184 aa12.71□□□□□ -0.37
SYNRG-223ENST00000616179 IGLV3-19P01714 112 aa12.71□□□□□ -0.37
SYNRG-223ENST00000616179 SCGB1D4Q6XE38 83 aa12.71□□□□□ -0.37
SYNRG-223ENST00000616179 ZNF503Q96F45 646 aa12.71□□□□□ -0.37
SYNRG-223ENST00000616179 FOXC2Q99958 501 aa12.71□□□□□ -0.37
SYNRG-223ENST00000616179 PRUNE2Q8WUY3 3088 aa12.71□□□□□ -0.37
SYNRG-223ENST00000616179 TMEM189A5PLL7 270 aa12.71□□□□□ -0.37
SYNRG-223ENST00000616179 PRCDQ00LT1 54 aa12.71□□□□□ -0.37
SYNRG-223ENST00000616179 PRB3Q04118 309 aaPredicted RBP12.71□□□□□ -0.37
SYNRG-223ENST00000616179 PPP1R32Q7Z5V6 425 aa12.71□□□□□ -0.37
SYNRG-223ENST00000616179 S4R3C0 116 aa12.71□□□□□ -0.37
SYNRG-223ENST00000616179 HCFC1P51610 2035 aa12.71□□□□□ -0.38
SYNRG-223ENST00000616179 DSCAML1Q8TD84 2053 aa12.71□□□□□ -0.38
SYNRG-223ENST00000616179 SRSF9Q13242 221 aaKnown RBP eCLIP12.71□□□□□ -0.38
SYNRG-223ENST00000616179 HIGD1AQ9Y241 93 aa12.71□□□□□ -0.38
SYNRG-223ENST00000616179 C21orf140B9A014 251 aa12.7□□□□□ -0.38
SYNRG-223ENST00000616179 ERVK11-1P61568 191 aa12.7□□□□□ -0.38
SYNRG-223ENST00000616179 ITLN1Q8WWA0 313 aa12.7□□□□□ -0.38
SYNRG-223ENST00000616179 GEMIN7Q9H840 131 aaKnown RBP12.7□□□□□ -0.38
SYNRG-223ENST00000616179 TANC2Q9HCD6 1990 aa12.7□□□□□ -0.38
SYNRG-223ENST00000616179 TRAV26-1A0A087WT03 109 aa12.7□□□□□ -0.38
SYNRG-223ENST00000616179 P0C879 139 aa12.7□□□□□ -0.38
SYNRG-223ENST00000616179 WFDC2Q14508 124 aa12.7□□□□□ -0.38
SYNRG-223ENST00000616179 VMA21Q3ZAQ7 101 aa12.7□□□□□ -0.38
SYNRG-223ENST00000616179 RNF138Q8WVD3 245 aa12.7□□□□□ -0.38
SYNRG-223ENST00000616179 IGF2BP2-AS1Q96M15 143 aa12.7□□□□□ -0.38
SYNRG-223ENST00000616179 SRSF8Q9BRL6 282 aaKnown RBP12.7□□□□□ -0.38
SYNRG-223ENST00000616179 UFC1Q9Y3C8 167 aa12.7□□□□□ -0.38
SYNRG-223ENST00000616179 TRGV8A0A0C4DH27 118 aa12.7□□□□□ -0.38
SYNRG-223ENST00000616179 SP9P0CG40 484 aa12.7□□□□□ -0.38
SYNRG-223ENST00000616179 AMN1Q8IY45 258 aa12.7□□□□□ -0.38
SYNRG-223ENST00000616179 OR9G4Q8NGQ1 327 aa12.7□□□□□ -0.38
SYNRG-223ENST00000616179 C16orf54Q6UWD8 224 aa12.69□□□□□ -0.38
SYNRG-223ENST00000616179 FOXA2Q9Y261 457 aaPredicted RBP12.69□□□□□ -0.38
SYNRG-223ENST00000616179 K7ESF4 209 aa12.69□□□□□ -0.38
SYNRG-223ENST00000616179 GAGE13Q4V321 117 aa12.69□□□□□ -0.38
SYNRG-223ENST00000616179 ZNF747Q9BV97 191 aa12.69□□□□□ -0.38
SYNRG-223ENST00000616179 KRTAP27-1Q3LI81 207 aa12.69□□□□□ -0.38
SYNRG-223ENST00000616179 CD300EQ496F6 205 aaPredicted RBP12.69□□□□□ -0.38
SYNRG-223ENST00000616179 AAMDCQ9H7C9 122 aa12.69□□□□□ -0.38
SYNRG-223ENST00000616179 HBDP02042 147 aa12.68□□□□□ -0.38
SYNRG-223ENST00000616179 EVI2AP22794 236 aa12.68□□□□□ -0.38
SYNRG-223ENST00000616179 OR5AN1Q8NGI8 311 aa12.68□□□□□ -0.38
SYNRG-223ENST00000616179 SOX21Q9Y651 276 aaPredicted RBP12.68□□□□□ -0.38
SYNRG-223ENST00000616179 PROP1O75360 226 aa12.68□□□□□ -0.38
SYNRG-223ENST00000616179 APOMO95445 188 aa12.68□□□□□ -0.38
SYNRG-223ENST00000616179 ATP5G2Q06055 141 aa12.68□□□□□ -0.38
SYNRG-223ENST00000616179 Q0VFX4 171 aa12.68□□□□□ -0.38
SYNRG-223ENST00000616179 ORMDL3Q8N138 153 aa12.68□□□□□ -0.38
SYNRG-223ENST00000616179 FAM216BQ8N7L0 139 aa12.68□□□□□ -0.38
SYNRG-223ENST00000616179 GTSF1Q8WW33 167 aa12.68□□□□□ -0.38
SYNRG-223ENST00000616179 MRPL20Q9BYC9 149 aaKnown RBP12.68□□□□□ -0.38
SYNRG-223ENST00000616179 TCRAP04437 139 aa12.68□□□□□ -0.38
SYNRG-223ENST00000616179 WIPF2Q8TF74 440 aaPredicted RBP12.68□□□□□ -0.38
SYNRG-223ENST00000616179 FMC1Q96HJ9 113 aa12.68□□□□□ -0.38
SYNRG-223ENST00000616179 IQCF6A8MYZ5 107 aa12.67□□□□□ -0.38
SYNRG-223ENST00000616179 RASL11BQ9BPW5 248 aa12.67□□□□□ -0.38
SYNRG-223ENST00000616179 TNFRSF1AP19438 455 aa12.67□□□□□ -0.38
SYNRG-223ENST00000616179 KIR2DL2P43627 348 aaPredicted RBP12.67□□□□□ -0.38
SYNRG-223ENST00000616179 DKK2Q9UBU2 259 aa12.67□□□□□ -0.38
SYNRG-223ENST00000616179 NBASA2RRP1 2371 aa12.67□□□□□ -0.38
SYNRG-223ENST00000616179 TCRBV4S1A1TA0A5B7 111 aa12.67□□□□□ -0.38
SYNRG-223ENST00000616179 PSMB11A5LHX3 300 aa12.67□□□□□ -0.38
SYNRG-223ENST00000616179 F2RL2O00254 374 aa12.67□□□□□ -0.38
SYNRG-223ENST00000616179 SCGB2A1O75556 95 aa12.67□□□□□ -0.38
SYNRG-223ENST00000616179 DKK1O94907 266 aa12.67□□□□□ -0.38
SYNRG-223ENST00000616179 RNASE2P10153 161 aaKnown RBP12.67□□□□□ -0.38
SYNRG-223ENST00000616179 TRIP6Q15654 476 aaKnown RBP12.67□□□□□ -0.38
SYNRG-223ENST00000616179 FAM231DQ6ZW35 169 aa12.67□□□□□ -0.38
SYNRG-223ENST00000616179 NAV3Q8IVL0 2385 aa12.67□□□□□ -0.38
SYNRG-223ENST00000616179 TMEM213A2RRL7 107 aa12.67□□□□□ -0.38
SYNRG-223ENST00000616179 NDUFA3O95167 84 aa12.67□□□□□ -0.38
SYNRG-223ENST00000616179 LEPP41159 167 aa12.67□□□□□ -0.38
SYNRG-223ENST00000616179 UTF1Q5T230 341 aa12.67□□□□□ -0.38
SYNRG-223ENST00000616179 MED13Q9UHV7 2174 aa12.66□□□□□ -0.38
SYNRG-223ENST00000616179 FAM90A9PA6NNJ1 464 aa12.66□□□□□ -0.38
SYNRG-223ENST00000616179 FAM106CPP0CH98 169 aa12.66□□□□□ -0.38
SYNRG-223ENST00000616179 PSMB2P49721 201 aa12.66□□□□□ -0.38
SYNRG-223ENST00000616179 TMPRSS3P57727 454 aa12.66□□□□□ -0.38
SYNRG-223ENST00000616179 FAM106AQ4KMX7 169 aa12.66□□□□□ -0.38
SYNRG-223ENST00000616179 LINC00322Q6ZN03 302 aaPredicted RBP12.66□□□□□ -0.38
SYNRG-223ENST00000616179 MRPL16Q9NX20 251 aaKnown RBP12.66□□□□□ -0.38
SYNRG-223ENST00000616179 EP300Q09472 2414 aaPredicted RBP12.66□□□□□ -0.38
SYNRG-223ENST00000616179 IGKV3D-15A0A087WSY6 115 aa12.66□□□□□ -0.38
SYNRG-223ENST00000616179 H7C2G1 150 aa12.66□□□□□ -0.38
SYNRG-223ENST00000616179 SPINK8P0C7L1 97 aa12.66□□□□□ -0.38
SYNRG-223ENST00000616179 IGHV1-2P23083 117 aa12.66□□□□□ -0.38
SYNRG-223ENST00000616179 CCL11P51671 97 aa12.66□□□□□ -0.38
SYNRG-223ENST00000616179 CCL8P80075 99 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms