RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 IGKV1-8A0A0C4DH67 115 aa7.78□□□□□ -1.16
COL12A1-211ENST00000615798 A0A0U1RRA0 63 aa7.78□□□□□ -1.16
COL12A1-211ENST00000615798 CEND1Q8N111 149 aa7.78□□□□□ -1.16
COL12A1-211ENST00000615798 Q9H3A6 140 aa7.78□□□□□ -1.16
COL12A1-211ENST00000615798 FBLN5Q9UBX5 448 aa7.78□□□□□ -1.16
COL12A1-211ENST00000615798 POLR3KQ9Y2Y1 108 aaPredicted RBP7.78□□□□□ -1.16
COL12A1-211ENST00000615798 VSIG8P0DPA2 414 aa7.78□□□□□ -1.16
COL12A1-211ENST00000615798 MPZP25189 248 aa7.78□□□□□ -1.16
COL12A1-211ENST00000615798 C5orf66Q9H5L9 145 aa7.78□□□□□ -1.16
COL12A1-211ENST00000615798 YPEL1O60688 119 aa7.78□□□□□ -1.16
COL12A1-211ENST00000615798 CARD19Q96LW7 228 aa7.78□□□□□ -1.16
COL12A1-211ENST00000615798 IGHV5-51A0A0C4DH38 117 aa7.78□□□□□ -1.16
COL12A1-211ENST00000615798 CD3EP07766 207 aa7.78□□□□□ -1.16
COL12A1-211ENST00000615798 TAL2Q16559 108 aa7.78□□□□□ -1.16
COL12A1-211ENST00000615798 TEX43Q6ZNM6 134 aa7.78□□□□□ -1.16
COL12A1-211ENST00000615798 PLXNA2O75051 1894 aa7.78□□□□□ -1.16
COL12A1-211ENST00000615798 IGHV2-70P01814 119 aa7.78□□□□□ -1.16
COL12A1-211ENST00000615798 UBE2E1P51965 193 aa7.78□□□□□ -1.16
COL12A1-211ENST00000615798 CGAP01215 116 aa7.78□□□□□ -1.16
COL12A1-211ENST00000615798 MYF5P13349 255 aa7.78□□□□□ -1.16
COL12A1-211ENST00000615798 TMEM187Q14656 261 aa7.78□□□□□ -1.16
COL12A1-211ENST00000615798 CCL11P51671 97 aa7.77□□□□□ -1.16
COL12A1-211ENST00000615798 HAPLN4Q86UW8 402 aa7.77□□□□□ -1.16
COL12A1-211ENST00000615798 SBF1O95248 1867 aa7.77□□□□□ -1.16
COL12A1-211ENST00000615798 CUL9Q8IWT3 2517 aa7.77□□□□□ -1.16
COL12A1-211ENST00000615798 PGLYRP1O75594 196 aaPredicted RBP7.77□□□□□ -1.17
COL12A1-211ENST00000615798 LYL1P12980 280 aa7.77□□□□□ -1.17
COL12A1-211ENST00000615798 SCRT1Q9BWW7 348 aa7.77□□□□□ -1.17
COL12A1-211ENST00000615798 PRO1854Q9UHT4 67 aa7.77□□□□□ -1.17
COL12A1-211ENST00000615798 FGF6P10767 208 aa7.77□□□□□ -1.17
COL12A1-211ENST00000615798 HLA-DRB4P13762 266 aa7.77□□□□□ -1.17
COL12A1-211ENST00000615798 HLA-DRB4X5D2U9 266 aa7.77□□□□□ -1.17
COL12A1-211ENST00000615798 C3orf79P0CE67 100 aa7.77□□□□□ -1.17
COL12A1-211ENST00000615798 PEBP1P30086 187 aaKnown RBP7.77□□□□□ -1.17
COL12A1-211ENST00000615798 Q8NFD4 153 aa7.77□□□□□ -1.17
COL12A1-211ENST00000615798 HELZP42694 1942 aaKnown RBP7.77□□□□□ -1.17
COL12A1-211ENST00000615798 NPPCP23582 126 aa7.77□□□□□ -1.17
COL12A1-211ENST00000615798 BVES-AS1Q5T3Y7 98 aa7.77□□□□□ -1.17
COL12A1-211ENST00000615798 ZNF721Q8TF20 911 aa7.77□□□□□ -1.17
COL12A1-211ENST00000615798 SPG11Q96JI7 2443 aa7.77□□□□□ -1.17
COL12A1-211ENST00000615798 C9orf172C9J069 976 aa7.77□□□□□ -1.17
COL12A1-211ENST00000615798 FGFRL1Q8N441 504 aa7.77□□□□□ -1.17
COL12A1-211ENST00000615798 IGHV1OR15-9A0A0B4J2B8 117 aa7.77□□□□□ -1.17
COL12A1-211ENST00000615798 FABP5P3A8MUU1 101 aa7.77□□□□□ -1.17
COL12A1-211ENST00000615798 GAS1P54826 345 aa7.77□□□□□ -1.17
COL12A1-211ENST00000615798 LINC01545Q5VT33 79 aa7.77□□□□□ -1.17
COL12A1-211ENST00000615798 SLC25A38Q96DW6 304 aa7.76□□□□□ -1.17
COL12A1-211ENST00000615798 ZNF703Q9H7S9 590 aaPredicted RBP7.76□□□□□ -1.17
COL12A1-211ENST00000615798 FAM236DA0A1B0GTK5 79 aa7.76□□□□□ -1.17
COL12A1-211ENST00000615798 FAM236CP0DP71 79 aa7.76□□□□□ -1.17
COL12A1-211ENST00000615798 RASL10BQ96S79 203 aa7.76□□□□□ -1.17
COL12A1-211ENST00000615798 FOXS1O43638 330 aa7.76□□□□□ -1.17
COL12A1-211ENST00000615798 NANOS3P60323 173 aaKnown RBP7.76□□□□□ -1.17
COL12A1-211ENST00000615798 PROP1O75360 226 aa7.76□□□□□ -1.17
COL12A1-211ENST00000615798 CRLF1O75462 422 aa7.76□□□□□ -1.17
COL12A1-211ENST00000615798 SLC25A53Q5H9E4 307 aa7.76□□□□□ -1.17
COL12A1-211ENST00000615798 ZXDCQ2QGD7 858 aaPredicted RBP7.76□□□□□ -1.17
COL12A1-211ENST00000615798 FAM104BQ5XKR9 115 aa7.76□□□□□ -1.17
COL12A1-211ENST00000615798 ERCC8Q13216 396 aa7.76□□□□□ -1.17
COL12A1-211ENST00000615798 LOC102723996A0A087X1L8 192 aa7.76□□□□□ -1.17
COL12A1-211ENST00000615798 FUSP35637 526 aaKnown RBP eCLIP7.76□□□□□ -1.17
COL12A1-211ENST00000615798 LINC00114Q6XXX2 140 aa7.76□□□□□ -1.17
COL12A1-211ENST00000615798 DMRTC2Q8IXT2 367 aaPredicted RBP7.76□□□□□ -1.17
COL12A1-211ENST00000615798 TMEM131Q92545 1883 aa7.76□□□□□ -1.17
COL12A1-211ENST00000615798 PRSS29PA6NIE9 313 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 LCNL1Q6ZST4 164 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 MPLKIPQ8TAP9 179 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 C14orf132Q9NPU4 83 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 CXCL1P09341 107 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 TIMP3P35625 211 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 RNF7Q9UBF6 113 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 CEP192Q8TEP8 1941 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 CD69Q07108 199 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 LINC01587Q99440 93 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 AGMATQ9BSE5 352 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 TCF19Q9Y242 345 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 UBE2BP63146 152 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 SLC25A39Q9BZJ4 359 aaPredicted RBP7.75□□□□□ -1.17
COL12A1-211ENST00000615798 IGHV3-20A0A0C4DH32 117 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 COX8AP10176 69 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 A4D1N5 150 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 IFNL4K9M1U5 179 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 IGLV1-36A0A0B4J1U3 117 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 VCYO14598 125 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 CRYBA2P53672 197 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 FAM90A1Q86YD7 464 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 FGF11Q92914 225 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 A0A0A6YYD4 124 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 TRGV5A0A0B4J1U4 118 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 C8orf46Q8TAG6 207 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 FAM60AQ9NP50 221 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 RNF115Q9Y4L5 304 aa7.75□□□□□ -1.17
COL12A1-211ENST00000615798 TRGV11A0A075B6L2 103 aa7.74□□□□□ -1.17
COL12A1-211ENST00000615798 LINC01590Q5TEZ4 76 aa7.74□□□□□ -1.17
COL12A1-211ENST00000615798 C8orf86Q6ZUL3 223 aa7.74□□□□□ -1.17
COL12A1-211ENST00000615798 TRAV25A0A0B4J276 109 aa7.74□□□□□ -1.17
COL12A1-211ENST00000615798 FOXC1Q12948 553 aa7.74□□□□□ -1.17
COL12A1-211ENST00000615798 NPIPB5A8MRT5 1133 aa7.74□□□□□ -1.17
COL12A1-211ENST00000615798 PRB3Q04118 309 aaPredicted RBP7.74□□□□□ -1.17
COL12A1-211ENST00000615798 SIVA1O15304 175 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms