RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 CHD9Q3L8U1 2897 aa7.2□□□□□ -1.26
PDLIM5-222ENST00000615540 A0A1W2PRE2 83 aa7.2□□□□□ -1.26
PDLIM5-222ENST00000615540 C3orf36Q3SXR2 165 aa7.2□□□□□ -1.26
PDLIM5-222ENST00000615540 GPR82Q96P67 336 aa7.2□□□□□ -1.26
PDLIM5-222ENST00000615540 PSG8Q9UQ74 426 aa7.2□□□□□ -1.26
PDLIM5-222ENST00000615540 LOC102724200A0A096LPH7 203 aaPredicted RBP7.2□□□□□ -1.26
PDLIM5-222ENST00000615540 TAS2R60P59551 318 aa7.2□□□□□ -1.26
PDLIM5-222ENST00000615540 Q8NFD4 153 aa7.2□□□□□ -1.26
PDLIM5-222ENST00000615540 PRELID3AQ96N28 172 aa7.2□□□□□ -1.26
PDLIM5-222ENST00000615540 YLPM1P49750 1951 aaKnown RBP7.2□□□□□ -1.26
PDLIM5-222ENST00000615540 AMBPP02760 352 aa7.2□□□□□ -1.26
PDLIM5-222ENST00000615540 CTAG1AP78358 180 aa7.2□□□□□ -1.26
PDLIM5-222ENST00000615540 TRBV20OR9-2A0A075B6H5 130 aa7.19□□□□□ -1.26
PDLIM5-222ENST00000615540 LHBP01229 141 aa7.19□□□□□ -1.26
PDLIM5-222ENST00000615540 ERCC8Q13216 396 aa7.19□□□□□ -1.26
PDLIM5-222ENST00000615540 TMEM242Q9NWH2 141 aa7.19□□□□□ -1.26
PDLIM5-222ENST00000615540 ZFP30Q9Y2G7 519 aa7.19□□□□□ -1.26
PDLIM5-222ENST00000615540 SPTBN2O15020 2390 aa7.19□□□□□ -1.26
PDLIM5-222ENST00000615540 SAA4P35542 130 aa7.19□□□□□ -1.26
PDLIM5-222ENST00000615540 FBLN7Q53RD9 439 aa7.19□□□□□ -1.26
PDLIM5-222ENST00000615540 ERASQ7Z444 233 aa7.19□□□□□ -1.26
PDLIM5-222ENST00000615540 C11orf44Q8N8P7 122 aa7.19□□□□□ -1.26
PDLIM5-222ENST00000615540 C8orf49Q96NF6 230 aa7.19□□□□□ -1.26
PDLIM5-222ENST00000615540 C9JCJ5 164 aa7.19□□□□□ -1.26
PDLIM5-222ENST00000615540 TRGV9Q99603 122 aa7.19□□□□□ -1.26
PDLIM5-222ENST00000615540 NPFFO15130 113 aa7.19□□□□□ -1.26
PDLIM5-222ENST00000615540 NDUFS7O75251 213 aa7.19□□□□□ -1.26
PDLIM5-222ENST00000615540 C5orf64Q2M2E5 130 aa7.19□□□□□ -1.26
PDLIM5-222ENST00000615540 TRAV41A0A0B4J266 112 aa7.19□□□□□ -1.26
PDLIM5-222ENST00000615540 TCF21O43680 179 aa7.19□□□□□ -1.26
PDLIM5-222ENST00000615540 RPS20P60866 119 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-222ENST00000615540 WT1-ASQ06250 92 aa7.19□□□□□ -1.26
PDLIM5-222ENST00000615540 FER1L6-AS1Q8NA97 138 aa7.19□□□□□ -1.26
PDLIM5-222ENST00000615540 NRN1Q9NPD7 142 aa7.19□□□□□ -1.26
PDLIM5-222ENST00000615540 OSTCQ9NRP0 149 aa7.19□□□□□ -1.26
PDLIM5-222ENST00000615540 RNF182Q8N6D2 247 aa7.18□□□□□ -1.26
PDLIM5-222ENST00000615540 KNTC1P50748 2209 aa7.18□□□□□ -1.26
PDLIM5-222ENST00000615540 NCOR1O75376 2440 aa7.18□□□□□ -1.26
PDLIM5-222ENST00000615540 A0A1B0GUT8 65 aa7.18□□□□□ -1.26
PDLIM5-222ENST00000615540 A0A1B0GWJ7 208 aa7.18□□□□□ -1.26
PDLIM5-222ENST00000615540 NPIPB5A8MRT5 1133 aa7.18□□□□□ -1.26
PDLIM5-222ENST00000615540 M0R1W7 72 aa7.18□□□□□ -1.26
PDLIM5-222ENST00000615540 DNLZQ5SXM8 178 aa7.18□□□□□ -1.26
PDLIM5-222ENST00000615540 NUP35Q8NFH5 326 aa7.18□□□□□ -1.26
PDLIM5-222ENST00000615540 CD33P20138 364 aa7.18□□□□□ -1.26
PDLIM5-222ENST00000615540 ZNF56Q15929 161 aa7.18□□□□□ -1.26
PDLIM5-222ENST00000615540 Q71RC1 249 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-222ENST00000615540 SAPCD1Q5SSQ6 148 aa7.18□□□□□ -1.26
PDLIM5-222ENST00000615540 ZNF407Q9C0G0 2248 aa7.18□□□□□ -1.26
PDLIM5-222ENST00000615540 SIGLEC15Q6ZMC9 328 aa7.17□□□□□ -1.26
PDLIM5-222ENST00000615540 GNB1LQ9BYB4 327 aa7.17□□□□□ -1.26
PDLIM5-222ENST00000615540 TCRAP04437 139 aa7.17□□□□□ -1.26
PDLIM5-222ENST00000615540 COL4A2P08572 1712 aa7.17□□□□□ -1.26
PDLIM5-222ENST00000615540 TMEM136Q6ZRR5 245 aa7.17□□□□□ -1.26
PDLIM5-222ENST00000615540 OR10AG1Q8NH19 301 aa7.17□□□□□ -1.26
PDLIM5-222ENST00000615540 TRBV24-1A0A075B6N3 115 aa7.17□□□□□ -1.26
PDLIM5-222ENST00000615540 DMRTA1Q5VZB9 504 aa7.17□□□□□ -1.26
PDLIM5-222ENST00000615540 C22orf34Q6ZV56 151 aa7.17□□□□□ -1.26
PDLIM5-222ENST00000615540 REC114Q7Z4M0 266 aa7.17□□□□□ -1.26
PDLIM5-222ENST00000615540 NIT1Q86X76 327 aa7.17□□□□□ -1.26
PDLIM5-222ENST00000615540 TSKUQ8WUA8 353 aa7.17□□□□□ -1.26
PDLIM5-222ENST00000615540 DNAJC13O75165 2243 aa7.17□□□□□ -1.26
PDLIM5-222ENST00000615540 NCR2O95944 276 aa7.17□□□□□ -1.26
PDLIM5-222ENST00000615540 RAB37Q96AX2 223 aa7.17□□□□□ -1.26
PDLIM5-222ENST00000615540 SLX1AQ9BQ83 275 aa7.17□□□□□ -1.26
PDLIM5-222ENST00000615540 MOB4Q9Y3A3 225 aa7.17□□□□□ -1.26
PDLIM5-222ENST00000615540 SCGB1D4Q6XE38 83 aa7.17□□□□□ -1.26
PDLIM5-222ENST00000615540 DMRTC2Q8IXT2 367 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-222ENST00000615540 ZNF502Q8TBZ5 544 aa7.17□□□□□ -1.26
PDLIM5-222ENST00000615540 H3BUX3 64 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 SH2D1AO60880 128 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 VPS25Q9BRG1 176 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 KMT2EQ8IZD2 1858 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 M0QZK8 103 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 ATP6V0E1O15342 81 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 TDGF1P3P51864 188 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 PAX8Q06710 450 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 TRAV9-1A0A075B6T8 112 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 TOMM40O96008 361 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 SCGB1C2P0DMR2 95 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 LEPP41159 167 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 TMEM70Q9BUB7 260 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 UQCR10Q9UDW1 63 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 AHCTF1Q8WYP5 2266 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 GGTLC3B5MD39 225 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 G3V318 75 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 ITGB1BP1O14713 200 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 SYT8Q8NBV8 401 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 BEND2Q8NDZ0 799 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 OR5AN1Q8NGI8 311 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 TMEM160Q9NX00 188 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 KIAA2026Q5HYC2 2103 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 K7EN84 100 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 FOSL1P15407 271 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 ASIPP42127 132 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 ZNF138P52744 262 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 MCRIP2Q9BUT9 160 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 AP5S1Q9NUS5 200 aa7.16□□□□□ -1.26
PDLIM5-222ENST00000615540 HOXB4P17483 251 aaPredicted RBP7.15□□□□□ -1.26
PDLIM5-222ENST00000615540 SNRPD3P62318 126 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms