RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 IGHV3-73A0A0B4J1V6 119 aa16.47■□□□□ 0.23
CTDP1-208ENST00000613122 PSCAO43653 123 aa16.47■□□□□ 0.23
CTDP1-208ENST00000613122 UBE2E1P51965 193 aa16.47■□□□□ 0.23
CTDP1-208ENST00000613122 LHFPL1Q86WI0 220 aa16.47■□□□□ 0.23
CTDP1-208ENST00000613122 VSIRQ9H7M9 311 aa16.47■□□□□ 0.23
CTDP1-208ENST00000613122 RHPN1-AS1Q9BWJ2 59 aa16.47■□□□□ 0.23
CTDP1-208ENST00000613122 TSKUQ8WUA8 353 aa16.47■□□□□ 0.23
CTDP1-208ENST00000613122 LINC00477Q96M19 166 aa16.47■□□□□ 0.23
CTDP1-208ENST00000613122 RPRMLQ8N4K4 120 aa16.46■□□□□ 0.23
CTDP1-208ENST00000613122 C14orf144Q96I85 54 aa16.46■□□□□ 0.23
CTDP1-208ENST00000613122 LY6G6EA0A0G2JKS1 128 aa16.46■□□□□ 0.23
CTDP1-208ENST00000613122 LINC00469Q8N7U9 141 aa16.46■□□□□ 0.23
CTDP1-208ENST00000613122 UBE2E2Q96LR5 201 aa16.46■□□□□ 0.23
CTDP1-208ENST00000613122 U3KQA8 63 aa16.46■□□□□ 0.23
CTDP1-208ENST00000613122 LINC00473A8K010 186 aa16.46■□□□□ 0.23
CTDP1-208ENST00000613122 RIPPLY3P57055 190 aa16.46■□□□□ 0.23
CTDP1-208ENST00000613122 SPATA31B1PQ5VZV4 182 aa16.45■□□□□ 0.22
CTDP1-208ENST00000613122 IGHV3-53P01767 116 aa16.45■□□□□ 0.22
CTDP1-208ENST00000613122 ST6GALNAC6Q969X2 333 aa16.45■□□□□ 0.22
CTDP1-208ENST00000613122 LDLRAD4O15165 306 aa16.45■□□□□ 0.22
CTDP1-208ENST00000613122 IGKV1-5P01602 117 aa16.45■□□□□ 0.22
CTDP1-208ENST00000613122 PRSS33Q8NF86 280 aa16.45■□□□□ 0.22
CTDP1-208ENST00000613122 STAG3L3P0CL85 134 aa16.45■□□□□ 0.22
CTDP1-208ENST00000613122 SYNJ2BPP57105 145 aa16.45■□□□□ 0.22
CTDP1-208ENST00000613122 MBD3L1Q8WWY6 194 aa16.45■□□□□ 0.22
CTDP1-208ENST00000613122 CHTOPQ9Y3Y2 248 aaKnown RBP16.45■□□□□ 0.22
CTDP1-208ENST00000613122 BEND2Q8NDZ0 799 aa16.45■□□□□ 0.22
CTDP1-208ENST00000613122 MGST2Q99735 147 aa16.45■□□□□ 0.22
CTDP1-208ENST00000613122 PARD6GQ9BYG4 376 aaPredicted RBP16.45■□□□□ 0.22
CTDP1-208ENST00000613122 DAZ1Q9NQZ3 744 aaKnown RBP16.45■□□□□ 0.22
CTDP1-208ENST00000613122 PGPEP1LA6NFU8 196 aa16.44■□□□□ 0.22
CTDP1-208ENST00000613122 ADMP35318 185 aa16.44■□□□□ 0.22
CTDP1-208ENST00000613122 TSPAN13O95857 204 aa16.44■□□□□ 0.22
CTDP1-208ENST00000613122 IGHV1-69DA0A0B4J2H0 117 aa16.44■□□□□ 0.22
CTDP1-208ENST00000613122 DPM2O94777 84 aa16.44■□□□□ 0.22
CTDP1-208ENST00000613122 TOMM40O96008 361 aa16.44■□□□□ 0.22
CTDP1-208ENST00000613122 IGHV1-69P01742 117 aa16.44■□□□□ 0.22
CTDP1-208ENST00000613122 ZNF815PA8K554 130 aa16.44■□□□□ 0.22
CTDP1-208ENST00000613122 OVOL3O00110 214 aa16.43■□□□□ 0.22
CTDP1-208ENST00000613122 CKS1BP61024 79 aa16.43■□□□□ 0.22
CTDP1-208ENST00000613122 TMEM86BQ8N661 226 aa16.43■□□□□ 0.22
CTDP1-208ENST00000613122 LINC00614P0C842 121 aa16.43■□□□□ 0.22
CTDP1-208ENST00000613122 LINC01549A6NIU2 74 aa16.43■□□□□ 0.22
CTDP1-208ENST00000613122 CTAG1AP78358 180 aa16.43■□□□□ 0.22
CTDP1-208ENST00000613122 ACACAQ13085 2346 aa16.43■□□□□ 0.22
CTDP1-208ENST00000613122 SRSF8Q9BRL6 282 aaKnown RBP16.43■□□□□ 0.22
CTDP1-208ENST00000613122 SERF1AO75920 110 aa16.42■□□□□ 0.22
CTDP1-208ENST00000613122 CR1LQ2VPA4 569 aa16.42■□□□□ 0.22
CTDP1-208ENST00000613122 ZNF876PQ49A33 203 aa16.42■□□□□ 0.22
CTDP1-208ENST00000613122 TTC32Q5I0X7 151 aa16.42■□□□□ 0.22
CTDP1-208ENST00000613122 LCN12Q6JVE5 192 aa16.42■□□□□ 0.22
CTDP1-208ENST00000613122 ATP5L2Q7Z4Y8 100 aa16.42■□□□□ 0.22
CTDP1-208ENST00000613122 TCRAP04437 139 aa16.41■□□□□ 0.22
CTDP1-208ENST00000613122 CEACAM8P31997 349 aaPredicted RBP16.41■□□□□ 0.22
CTDP1-208ENST00000613122 FNDC1Q4ZHG4 1894 aaPredicted RBP16.41■□□□□ 0.22
CTDP1-208ENST00000613122 NMSQ5H8A3 153 aa16.41■□□□□ 0.22
CTDP1-208ENST00000613122 C5orf24Q7Z6I8 188 aa16.41■□□□□ 0.22
CTDP1-208ENST00000613122 GZMBP10144 247 aa16.41■□□□□ 0.22
CTDP1-208ENST00000613122 PRDM13Q9H4Q3 707 aa16.41■□□□□ 0.22
CTDP1-208ENST00000613122 A8MXK9 166 aa16.41■□□□□ 0.22
CTDP1-208ENST00000613122 TNFSF13O75888 250 aa16.41■□□□□ 0.22
CTDP1-208ENST00000613122 CA1P00915 261 aaPredicted RBP16.41■□□□□ 0.22
CTDP1-208ENST00000613122 NRN1Q9NPD7 142 aa16.4■□□□□ 0.22
CTDP1-208ENST00000613122 LINC00158P58513 81 aa16.4■□□□□ 0.22
CTDP1-208ENST00000613122 CACNA1BQ00975 2339 aa16.4■□□□□ 0.22
CTDP1-208ENST00000613122 IGHV2-70DA0A0C4DH43 119 aa16.4■□□□□ 0.22
CTDP1-208ENST00000613122 KIF26BQ2KJY2 2108 aa16.4■□□□□ 0.22
CTDP1-208ENST00000613122 TMEM170AQ8WVE7 144 aa16.4■□□□□ 0.22
CTDP1-208ENST00000613122 C11orf68Q9H3H3 251 aaKnown RBP16.4■□□□□ 0.22
CTDP1-208ENST00000613122 DMRT1Q9Y5R6 373 aa16.4■□□□□ 0.22
CTDP1-208ENST00000613122 LINC01619G3V211 115 aa16.4■□□□□ 0.22
CTDP1-208ENST00000613122 GNB1LQ9BYB4 327 aa16.4■□□□□ 0.22
CTDP1-208ENST00000613122 NCOR1O75376 2440 aa16.4■□□□□ 0.22
CTDP1-208ENST00000613122 SUPT4H1P63272 117 aaKnown RBP16.4■□□□□ 0.22
CTDP1-208ENST00000613122 C1QL4Q86Z23 238 aa16.4■□□□□ 0.22
CTDP1-208ENST00000613122 TMEM14EPQ6UXP3 125 aa16.39■□□□□ 0.21
CTDP1-208ENST00000613122 Q8TCH9 128 aa16.39■□□□□ 0.21
CTDP1-208ENST00000613122 LAGE3Q14657 143 aa16.39■□□□□ 0.21
CTDP1-208ENST00000613122 OR5A1Q8NGJ0 315 aa16.39■□□□□ 0.21
CTDP1-208ENST00000613122 Q71RC1 249 aaPredicted RBP16.39■□□□□ 0.21
CTDP1-208ENST00000613122 RNF144BQ7Z419 303 aa16.39■□□□□ 0.21
CTDP1-208ENST00000613122 J3QLI3 93 aa16.39■□□□□ 0.21
CTDP1-208ENST00000613122 S100A7L2Q5SY68 101 aa16.39■□□□□ 0.21
CTDP1-208ENST00000613122 PLNP26678 52 aa16.38■□□□□ 0.21
CTDP1-208ENST00000613122 TRAV2A0A0B4J234 112 aa16.38■□□□□ 0.21
CTDP1-208ENST00000613122 TDGF1P3P51864 188 aa16.38■□□□□ 0.21
CTDP1-208ENST00000613122 ATP6V0E1O15342 81 aa16.38■□□□□ 0.21
CTDP1-208ENST00000613122 MORN3Q6PF18 240 aaPredicted RBP16.38■□□□□ 0.21
CTDP1-208ENST00000613122 Q8TAT8 98 aa16.38■□□□□ 0.21
CTDP1-208ENST00000613122 SH2D1AO60880 128 aa16.38■□□□□ 0.21
CTDP1-208ENST00000613122 LINC00205P59089 165 aa16.38■□□□□ 0.21
CTDP1-208ENST00000613122 DEFB131AP59861 70 aa16.38■□□□□ 0.21
CTDP1-208ENST00000613122 PSG3Q16557 428 aa16.38■□□□□ 0.21
CTDP1-208ENST00000613122 ZNF562Q6V9R5 426 aa16.38■□□□□ 0.21
CTDP1-208ENST00000613122 RFNGQ9Y644 331 aa16.38■□□□□ 0.21
CTDP1-208ENST00000613122 IGFL4Q6B9Z1 124 aa16.37■□□□□ 0.21
CTDP1-208ENST00000613122 Q6ZS49 121 aa16.37■□□□□ 0.21
CTDP1-208ENST00000613122 FAM110DQ8TAY7 271 aaPredicted RBP16.37■□□□□ 0.21
CTDP1-208ENST00000613122 TMEM249Q2WGJ8 235 aa16.37■□□□□ 0.21
CTDP1-208ENST00000613122 PIP4P1Q86T03 277 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms