RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 KIR2DL5BQ8NHK3 375 aa13.35□□□□□ -0.27
SEMA3B-211ENST00000612509 EDA2RQ9HAV5 297 aa13.35□□□□□ -0.27
SEMA3B-211ENST00000612509 NRN1Q9NPD7 142 aa13.35□□□□□ -0.27
SEMA3B-211ENST00000612509 SIX6O95475 246 aa13.34□□□□□ -0.27
SEMA3B-211ENST00000612509 GGACTQ9BVM4 153 aa13.34□□□□□ -0.27
SEMA3B-211ENST00000612509 NPVFQ9HCQ7 196 aa13.34□□□□□ -0.27
SEMA3B-211ENST00000612509 LYRM2Q9NU23 88 aaPredicted RBP13.34□□□□□ -0.27
SEMA3B-211ENST00000612509 SLC45A2Q9UMX9 530 aa13.34□□□□□ -0.27
SEMA3B-211ENST00000612509 FAM24AA6NFZ4 105 aa13.33□□□□□ -0.28
SEMA3B-211ENST00000612509 SLC38A11Q08AI6 406 aa13.33□□□□□ -0.28
SEMA3B-211ENST00000612509 C1orf194Q5T5A4 169 aa13.33□□□□□ -0.28
SEMA3B-211ENST00000612509 FBXL17Q9UF56 701 aa13.33□□□□□ -0.28
SEMA3B-211ENST00000612509 UBE2CO00762 179 aa13.32□□□□□ -0.28
SEMA3B-211ENST00000612509 DEDDO75618 318 aa13.32□□□□□ -0.28
SEMA3B-211ENST00000612509 CST7O76096 145 aa13.32□□□□□ -0.28
SEMA3B-211ENST00000612509 LINC00869P0C866 280 aa13.32□□□□□ -0.28
SEMA3B-211ENST00000612509 ORM2P19652 201 aa13.32□□□□□ -0.28
SEMA3B-211ENST00000612509 DEFB135Q30KP9 77 aa13.32□□□□□ -0.28
SEMA3B-211ENST00000612509 TEPPQ6URK8 271 aa13.32□□□□□ -0.28
SEMA3B-211ENST00000612509 OR1B1Q8NGR6 318 aa13.32□□□□□ -0.28
SEMA3B-211ENST00000612509 OVOL2Q9BRP0 275 aa13.32□□□□□ -0.28
SEMA3B-211ENST00000612509 TMEM147Q9BVK8 224 aa13.32□□□□□ -0.28
SEMA3B-211ENST00000612509 NMES1Q9C002 83 aa13.32□□□□□ -0.28
SEMA3B-211ENST00000612509 DOK5Q9P104 306 aa13.32□□□□□ -0.28
SEMA3B-211ENST00000612509 IGSF23A1L1A6 192 aa13.31□□□□□ -0.28
SEMA3B-211ENST00000612509 PTTG1O95997 202 aa13.31□□□□□ -0.28
SEMA3B-211ENST00000612509 SELENOTP62341 195 aa13.31□□□□□ -0.28
SEMA3B-211ENST00000612509 PSMG4Q5JS54 123 aa13.31□□□□□ -0.28
SEMA3B-211ENST00000612509 Q6ZWC4 215 aa13.31□□□□□ -0.28
SEMA3B-211ENST00000612509 STX12Q86Y82 276 aa13.31□□□□□ -0.28
SEMA3B-211ENST00000612509 OR8I2Q8N0Y5 310 aa13.31□□□□□ -0.28
SEMA3B-211ENST00000612509 TMEM252Q8N6L7 170 aa13.31□□□□□ -0.28
SEMA3B-211ENST00000612509 TMEM217Q8N7C4 229 aa13.31□□□□□ -0.28
SEMA3B-211ENST00000612509 MUC7Q8TAX7 377 aa13.31□□□□□ -0.28
SEMA3B-211ENST00000612509 SLC25A32Q9H2D1 315 aa13.31□□□□□ -0.28
SEMA3B-211ENST00000612509 TP53TG1Q9Y2A0 90 aa13.31□□□□□ -0.28
SEMA3B-211ENST00000612509 ZNF98A6NK75 572 aa13.3□□□□□ -0.28
SEMA3B-211ENST00000612509 H3BRN7 92 aa13.3□□□□□ -0.28
SEMA3B-211ENST00000612509 SSNA1O43805 119 aa13.3□□□□□ -0.28
SEMA3B-211ENST00000612509 SULT1A1P50225 295 aa13.3□□□□□ -0.28
SEMA3B-211ENST00000612509 PLP1P60201 277 aa13.3□□□□□ -0.28
SEMA3B-211ENST00000612509 SNRPD3P62318 126 aaKnown RBP13.3□□□□□ -0.28
SEMA3B-211ENST00000612509 LRRC37A5PQ49AS3 106 aa13.3□□□□□ -0.28
SEMA3B-211ENST00000612509 ZNF546Q86UE3 836 aa13.3□□□□□ -0.28
SEMA3B-211ENST00000612509 STHQ8IWL8 128 aa13.3□□□□□ -0.28
SEMA3B-211ENST00000612509 SLC25A22Q9H936 323 aa13.3□□□□□ -0.28
SEMA3B-211ENST00000612509 SEPSECSQ9HD40 501 aaKnown RBP13.3□□□□□ -0.28
SEMA3B-211ENST00000612509 KNCNA6PVL3 124 aa13.29□□□□□ -0.28
SEMA3B-211ENST00000612509 C3orf84H3BNL1 204 aa13.29□□□□□ -0.28
SEMA3B-211ENST00000612509 S100A7P31151 101 aa13.29□□□□□ -0.28
SEMA3B-211ENST00000612509 H2BFSP57053 126 aa13.29□□□□□ -0.28
SEMA3B-211ENST00000612509 RAP2BP61225 183 aa13.29□□□□□ -0.28
SEMA3B-211ENST00000612509 TRPT1Q86TN4 253 aaKnown RBP13.29□□□□□ -0.28
SEMA3B-211ENST00000612509 MGST2Q99735 147 aa13.29□□□□□ -0.28
SEMA3B-211ENST00000612509 SCRT1Q9BWW7 348 aa13.29□□□□□ -0.28
SEMA3B-211ENST00000612509 CSTL1Q9H114 145 aa13.29□□□□□ -0.28
SEMA3B-211ENST00000612509 HIGD1AQ9Y241 93 aa13.29□□□□□ -0.28
SEMA3B-211ENST00000612509 SOCS3O14543 225 aa13.28□□□□□ -0.28
SEMA3B-211ENST00000612509 AGPAT2O15120 278 aa13.28□□□□□ -0.28
SEMA3B-211ENST00000612509 SPRY2O43597 315 aa13.28□□□□□ -0.28
SEMA3B-211ENST00000612509 HYPMO75409 117 aa13.28□□□□□ -0.28
SEMA3B-211ENST00000612509 GALR1P47211 349 aa13.28□□□□□ -0.28
SEMA3B-211ENST00000612509 CYCSP99999 105 aaKnown RBP13.28□□□□□ -0.28
SEMA3B-211ENST00000612509 VWC2Q2TAL6 325 aa13.28□□□□□ -0.28
SEMA3B-211ENST00000612509 SHANK2-AS3Q9BTD1 123 aa13.28□□□□□ -0.28
SEMA3B-211ENST00000612509 SLC25A39Q9BZJ4 359 aaPredicted RBP13.28□□□□□ -0.28
SEMA3B-211ENST00000612509 UQCC1Q9NVA1 299 aa13.28□□□□□ -0.28
SEMA3B-211ENST00000612509 OR5AC2Q9NZP5 309 aa13.28□□□□□ -0.28
SEMA3B-211ENST00000612509 AGRNO00468 2067 aa13.28□□□□□ -0.28
SEMA3B-211ENST00000612509 NBEAL2Q6ZNJ1 2754 aa13.28□□□□□ -0.28
SEMA3B-211ENST00000612509 UBE2L5PA0A1B0GUS4 154 aa13.27□□□□□ -0.29
SEMA3B-211ENST00000612509 CA1P00915 261 aaPredicted RBP13.27□□□□□ -0.29
SEMA3B-211ENST00000612509 OR5G3P0C626 314 aa13.27□□□□□ -0.29
SEMA3B-211ENST00000612509 PSMB3P49720 205 aa13.27□□□□□ -0.29
SEMA3B-211ENST00000612509 HBG1P69891 147 aa13.27□□□□□ -0.29
SEMA3B-211ENST00000612509 HBG2P69892 147 aa13.27□□□□□ -0.29
SEMA3B-211ENST00000612509 ACTL10Q5JWF8 245 aa13.27□□□□□ -0.29
SEMA3B-211ENST00000612509 RNF183Q96D59 192 aa13.27□□□□□ -0.29
SEMA3B-211ENST00000612509 ARL6Q9H0F7 186 aa13.27□□□□□ -0.29
SEMA3B-211ENST00000612509 WDR83OSQ9Y284 106 aa13.27□□□□□ -0.29
SEMA3B-211ENST00000612509 STARD9Q9P2P6 4700 aa13.27□□□□□ -0.29
SEMA3B-211ENST00000612509 E5RGE8 158 aa13.26□□□□□ -0.29
SEMA3B-211ENST00000612509 H0YIZ8 118 aa13.26□□□□□ -0.29
SEMA3B-211ENST00000612509 RLN2P04090 185 aa13.26□□□□□ -0.29
SEMA3B-211ENST00000612509 S100A11P31949 105 aa13.26□□□□□ -0.29
SEMA3B-211ENST00000612509 PPP1R1CQ8WVI7 109 aa13.26□□□□□ -0.29
SEMA3B-211ENST00000612509 GPR82Q96P67 336 aa13.26□□□□□ -0.29
SEMA3B-211ENST00000612509 UHRF2Q96PU4 802 aa13.26□□□□□ -0.29
SEMA3B-211ENST00000612509 ALG5Q9Y673 324 aa13.26□□□□□ -0.29
SEMA3B-211ENST00000612509 ID1P41134 155 aa13.25□□□□□ -0.29
SEMA3B-211ENST00000612509 CAMLGP49069 296 aa13.25□□□□□ -0.29
SEMA3B-211ENST00000612509 MEOX2P50222 304 aa13.25□□□□□ -0.29
SEMA3B-211ENST00000612509 EWSR1Q01844 656 aaKnown RBP eCLIP13.25□□□□□ -0.29
SEMA3B-211ENST00000612509 PXDC1Q5TGL8 231 aa13.25□□□□□ -0.29
SEMA3B-211ENST00000612509 SAMD13Q5VXD3 122 aa13.25□□□□□ -0.29
SEMA3B-211ENST00000612509 ARV1Q9H2C2 271 aa13.25□□□□□ -0.29
SEMA3B-211ENST00000612509 KMT2CQ8NEZ4 4911 aaKnown RBP13.25□□□□□ -0.29
SEMA3B-211ENST00000612509 SPP1P10451 314 aa13.24□□□□□ -0.29
SEMA3B-211ENST00000612509 LYL1P12980 280 aa13.24□□□□□ -0.29
SEMA3B-211ENST00000612509 C4BPBP20851 252 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms