RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 COMPP49747 757 aaPredicted RBP11.72□□□□□ -0.53
CDH1-213ENST00000612417 EFNA4P52798 201 aa11.72□□□□□ -0.53
CDH1-213ENST00000612417 PRRX1P54821 245 aa11.72□□□□□ -0.53
CDH1-213ENST00000612417 TMEM183BQ1AE95 376 aa11.72□□□□□ -0.53
CDH1-213ENST00000612417 CHRDL1Q9BU40 450 aa11.72□□□□□ -0.53
CDH1-213ENST00000612417 SNHG12Q9BXW3 62 aa11.72□□□□□ -0.53
CDH1-213ENST00000612417 SAMD10Q9BYL1 202 aa11.72□□□□□ -0.53
CDH1-213ENST00000612417 C7orf69Q9H7B7 122 aa11.72□□□□□ -0.53
CDH1-213ENST00000612417 SERTAD4Q9NUC0 356 aa11.72□□□□□ -0.53
CDH1-213ENST00000612417 SIGLEC9Q9Y336 463 aa11.72□□□□□ -0.53
CDH1-213ENST00000612417 UTP20O75691 2785 aaKnown RBP11.72□□□□□ -0.53
CDH1-213ENST00000612417 PPIAL4CA0A0B4J2A2 164 aa11.71□□□□□ -0.53
CDH1-213ENST00000612417 ZNF705FA8MVS1 300 aaPredicted RBP11.71□□□□□ -0.53
CDH1-213ENST00000612417 ENSAO43768 121 aaKnown RBP11.71□□□□□ -0.53
CDH1-213ENST00000612417 SPINK4O60575 86 aa11.71□□□□□ -0.53
CDH1-213ENST00000612417 GPX1P07203 203 aa11.71□□□□□ -0.53
CDH1-213ENST00000612417 ZNF705DP0CH99 300 aaPredicted RBP11.71□□□□□ -0.53
CDH1-213ENST00000612417 ZNF705BP0CI00 300 aaPredicted RBP11.71□□□□□ -0.53
CDH1-213ENST00000612417 PPIAL4GP0DN37 164 aa11.71□□□□□ -0.53
CDH1-213ENST00000612417 PLP1P60201 277 aa11.71□□□□□ -0.53
CDH1-213ENST00000612417 SLC35B1P78383 322 aa11.71□□□□□ -0.53
CDH1-213ENST00000612417 NHLRC2Q8NBF2 726 aa11.71□□□□□ -0.53
CDH1-213ENST00000612417 GRAMD2BQ96HH9 432 aa11.71□□□□□ -0.53
CDH1-213ENST00000612417 C20orf144Q9BQM9 153 aa11.71□□□□□ -0.53
CDH1-213ENST00000612417 KLF12Q9Y4X4 402 aa11.71□□□□□ -0.53
CDH1-213ENST00000612417 IGHV3-72A0A0B4J1Y9 119 aa11.71□□□□□ -0.54
CDH1-213ENST00000612417 MOSP00540 346 aa11.71□□□□□ -0.54
CDH1-213ENST00000612417 DMRTA1Q5VZB9 504 aa11.71□□□□□ -0.54
CDH1-213ENST00000612417 RUSC1-AS1Q66K80 236 aa11.71□□□□□ -0.54
CDH1-213ENST00000612417 HCP5Q6MZN7 132 aa11.71□□□□□ -0.54
CDH1-213ENST00000612417 MRPL54Q6P161 138 aaKnown RBP11.71□□□□□ -0.54
CDH1-213ENST00000612417 TOMM20LQ6UXN7 152 aa11.71□□□□□ -0.54
CDH1-213ENST00000612417 FAM168AQ92567 244 aa11.71□□□□□ -0.54
CDH1-213ENST00000612417 KCNS1Q96KK3 526 aa11.71□□□□□ -0.54
CDH1-213ENST00000612417 ONECUT1Q9UBC0 465 aa11.71□□□□□ -0.54
CDH1-213ENST00000612417 IGHV1-3A0A0C4DH29 117 aa11.7□□□□□ -0.54
CDH1-213ENST00000612417 TNXAQ16473 311 aa11.7□□□□□ -0.54
CDH1-213ENST00000612417 SIGLECL1Q8N7X8 197 aa11.7□□□□□ -0.54
CDH1-213ENST00000612417 CLEC7AQ9BXN2 247 aa11.7□□□□□ -0.54
CDH1-213ENST00000612417 EPDR1Q9UM22 224 aa11.7□□□□□ -0.54
CDH1-213ENST00000612417 FAM208BQ5VWN6 2430 aa11.7□□□□□ -0.54
CDH1-213ENST00000612417 BUB1B-PAK6H3BSN5 160 aa11.69□□□□□ -0.54
CDH1-213ENST00000612417 CA1P00915 261 aaPredicted RBP11.69□□□□□ -0.54
CDH1-213ENST00000612417 ORM2P19652 201 aa11.69□□□□□ -0.54
CDH1-213ENST00000612417 CD33P20138 364 aa11.69□□□□□ -0.54
CDH1-213ENST00000612417 NUDT10Q8NFP7 164 aa11.69□□□□□ -0.54
CDH1-213ENST00000612417 OR1B1Q8NGR6 318 aa11.69□□□□□ -0.54
CDH1-213ENST00000612417 NUDT11Q96G61 164 aa11.69□□□□□ -0.54
CDH1-213ENST00000612417 ZNF331Q9NQX6 463 aaPredicted RBP11.69□□□□□ -0.54
CDH1-213ENST00000612417 F11RQ9Y624 299 aaKnown RBP11.69□□□□□ -0.54
CDH1-213ENST00000612417 TRAV34A0A0B4J273 112 aa11.69□□□□□ -0.54
CDH1-213ENST00000612417 TEX22C9J3V5 150 aa11.69□□□□□ -0.54
CDH1-213ENST00000612417 APCSP02743 223 aa11.69□□□□□ -0.54
CDH1-213ENST00000612417 HIST1H1EP10412 219 aaKnown RBP11.69□□□□□ -0.54
CDH1-213ENST00000612417 GP9P14770 177 aa11.69□□□□□ -0.54
CDH1-213ENST00000612417 CNTFRP26992 372 aa11.69□□□□□ -0.54
CDH1-213ENST00000612417 SRIP30626 198 aa11.69□□□□□ -0.54
CDH1-213ENST00000612417 DLX1P56177 255 aa11.69□□□□□ -0.54
CDH1-213ENST00000612417 PRB3Q04118 309 aaPredicted RBP11.69□□□□□ -0.54
CDH1-213ENST00000612417 KIAA1644Q3SXP7 199 aa11.69□□□□□ -0.54
CDH1-213ENST00000612417 PPP1R27Q86WC6 154 aa11.69□□□□□ -0.54
CDH1-213ENST00000612417 SSBP3Q9BWW4 388 aaPredicted RBP11.69□□□□□ -0.54
CDH1-213ENST00000612417 ZNF586Q9NXT0 402 aa11.69□□□□□ -0.54
CDH1-213ENST00000612417 INSIG2Q9Y5U4 225 aa11.69□□□□□ -0.54
CDH1-213ENST00000612417 CRYBG3Q68DQ2 2970 aa11.68□□□□□ -0.54
CDH1-213ENST00000612417 ASH1LQ9NR48 2969 aaKnown RBP11.68□□□□□ -0.54
CDH1-213ENST00000612417 A0A1W2PS18 150 aa11.68□□□□□ -0.54
CDH1-213ENST00000612417 ZNF253O75346 499 aa11.68□□□□□ -0.54
CDH1-213ENST00000612417 HYPMO75409 117 aa11.68□□□□□ -0.54
CDH1-213ENST00000612417 GOSR1O95249 250 aa11.68□□□□□ -0.54
CDH1-213ENST00000612417 LIPFP07098 398 aa11.68□□□□□ -0.54
CDH1-213ENST00000612417 NBEAP1P0C6P0 100 aa11.68□□□□□ -0.54
CDH1-213ENST00000612417 UBE2G1P62253 170 aa11.68□□□□□ -0.54
CDH1-213ENST00000612417 NUP35Q8NFH5 326 aa11.68□□□□□ -0.54
CDH1-213ENST00000612417 C8orf46Q8TAG6 207 aa11.68□□□□□ -0.54
CDH1-213ENST00000612417 TSKUQ8WUA8 353 aa11.68□□□□□ -0.54
CDH1-213ENST00000612417 RCHY1Q96PM5 261 aa11.68□□□□□ -0.54
CDH1-213ENST00000612417 RNF5Q99942 180 aa11.68□□□□□ -0.54
CDH1-213ENST00000612417 MRPL27Q9P0M9 148 aaKnown RBP11.68□□□□□ -0.54
CDH1-213ENST00000612417 FBXL7Q9UJT9 491 aa11.68□□□□□ -0.54
CDH1-213ENST00000612417 TBL2Q9Y4P3 447 aaKnown RBP11.68□□□□□ -0.54
CDH1-213ENST00000612417 WNK2Q9Y3S1 2297 aa11.68□□□□□ -0.54
CDH1-213ENST00000612417 LOC105371242A0A075B767 164 aa11.67□□□□□ -0.54
CDH1-213ENST00000612417 SLC25A5P05141 298 aaKnown RBP11.67□□□□□ -0.54
CDH1-213ENST00000612417 GNG5P63218 68 aa11.67□□□□□ -0.54
CDH1-213ENST00000612417 SLAQ13239 276 aa11.67□□□□□ -0.54
CDH1-213ENST00000612417 C5orf17Q8NAS9 161 aa11.67□□□□□ -0.54
CDH1-213ENST00000612417 GPR82Q96P67 336 aa11.67□□□□□ -0.54
CDH1-213ENST00000612417 CCL19Q99731 98 aa11.67□□□□□ -0.54
CDH1-213ENST00000612417 MLST8Q9BVC4 326 aa11.67□□□□□ -0.54
CDH1-213ENST00000612417 MED13LQ71F56 2210 aa11.67□□□□□ -0.54
CDH1-213ENST00000612417 OVOL3O00110 214 aa11.67□□□□□ -0.54
CDH1-213ENST00000612417 ZNF324O75467 553 aaPredicted RBP11.67□□□□□ -0.54
CDH1-213ENST00000612417 COX7A1P24310 79 aa11.67□□□□□ -0.54
CDH1-213ENST00000612417 ATP5L2Q7Z4Y8 100 aa11.67□□□□□ -0.54
CDH1-213ENST00000612417 SRSF8Q9BRL6 282 aaKnown RBP11.67□□□□□ -0.54
CDH1-213ENST00000612417 NRN1Q9NPD7 142 aa11.67□□□□□ -0.54
CDH1-213ENST00000612417 PGPA6NDG6 321 aa11.66□□□□□ -0.54
CDH1-213ENST00000612417 AMTP48728 403 aa11.66□□□□□ -0.54
CDH1-213ENST00000612417 ARF6P62330 175 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms