RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 TMEM14BQ9NUH8 114 aa5.88□□□□□ -1.47
CSDE1-218ENST00000610726 HIGD1CA8MV81 97 aa5.88□□□□□ -1.47
CSDE1-218ENST00000610726 SMIM6P0DI80 62 aa5.88□□□□□ -1.47
CSDE1-218ENST00000610726 SLC25A16P16260 332 aa5.88□□□□□ -1.47
CSDE1-218ENST00000610726 CD33P20138 364 aa5.88□□□□□ -1.47
CSDE1-218ENST00000610726 RAX2Q96IS3 184 aa5.88□□□□□ -1.47
CSDE1-218ENST00000610726 SLC25A39Q9BZJ4 359 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-218ENST00000610726 NCOR1P1Q9H4R4 102 aa5.88□□□□□ -1.47
CSDE1-218ENST00000610726 OTORQ9NRC9 128 aa5.88□□□□□ -1.47
CSDE1-218ENST00000610726 TBL2Q9Y4P3 447 aaKnown RBP5.88□□□□□ -1.47
CSDE1-218ENST00000610726 TRAV1-1A0A0B4J248 108 aa5.88□□□□□ -1.47
CSDE1-218ENST00000610726 UBE2E1P51965 193 aa5.88□□□□□ -1.47
CSDE1-218ENST00000610726 RPS20P60866 119 aaKnown RBP5.88□□□□□ -1.47
CSDE1-218ENST00000610726 HBBP68871 147 aa5.88□□□□□ -1.47
CSDE1-218ENST00000610726 NDPQ00604 133 aa5.88□□□□□ -1.47
CSDE1-218ENST00000610726 FAM71F2Q6NXP2 309 aa5.88□□□□□ -1.47
CSDE1-218ENST00000610726 C22orf34Q6ZV56 151 aa5.88□□□□□ -1.47
CSDE1-218ENST00000610726 TCF24Q7RTU0 167 aa5.88□□□□□ -1.47
CSDE1-218ENST00000610726 TCF23Q7RTU1 214 aa5.88□□□□□ -1.47
CSDE1-218ENST00000610726 WFDC12Q8WWY7 111 aa5.88□□□□□ -1.47
CSDE1-218ENST00000610726 KAAG1Q9UBP8 84 aa5.88□□□□□ -1.47
CSDE1-218ENST00000610726 G3V318 75 aa5.87□□□□□ -1.47
CSDE1-218ENST00000610726 Q5PR19 223 aa5.87□□□□□ -1.47
CSDE1-218ENST00000610726 ZNF562Q6V9R5 426 aa5.87□□□□□ -1.47
CSDE1-218ENST00000610726 ZNF833PQ6ZTB9 187 aa5.87□□□□□ -1.47
CSDE1-218ENST00000610726 KLK15Q9H2R5 256 aa5.87□□□□□ -1.47
CSDE1-218ENST00000610726 TSPOP30536 169 aa5.87□□□□□ -1.47
CSDE1-218ENST00000610726 IGFL4Q6B9Z1 124 aa5.87□□□□□ -1.47
CSDE1-218ENST00000610726 MYOZ3Q8TDC0 251 aa5.87□□□□□ -1.47
CSDE1-218ENST00000610726 FMC1Q96HJ9 113 aa5.87□□□□□ -1.47
CSDE1-218ENST00000610726 RPP21Q9H633 154 aaKnown RBP5.87□□□□□ -1.47
CSDE1-218ENST00000610726 IGHV2-70DA0A0C4DH43 119 aa5.87□□□□□ -1.47
CSDE1-218ENST00000610726 A0A1B0GUT8 65 aa5.87□□□□□ -1.47
CSDE1-218ENST00000610726 NDUFS8O00217 210 aa5.87□□□□□ -1.47
CSDE1-218ENST00000610726 LEPROTL1O95214 131 aa5.87□□□□□ -1.47
CSDE1-218ENST00000610726 LHBP01229 141 aa5.87□□□□□ -1.47
CSDE1-218ENST00000610726 PPIFP30405 207 aaKnown RBP5.87□□□□□ -1.47
CSDE1-218ENST00000610726 WT1-ASQ06250 92 aa5.87□□□□□ -1.47
CSDE1-218ENST00000610726 LINC01356Q8N9X3 169 aa5.87□□□□□ -1.47
CSDE1-218ENST00000610726 TRGV9Q99603 122 aa5.87□□□□□ -1.47
CSDE1-218ENST00000610726 NDUFA4L2Q9NRX3 87 aa5.87□□□□□ -1.47
CSDE1-218ENST00000610726 HSPB8Q9UJY1 196 aa5.87□□□□□ -1.47
CSDE1-218ENST00000610726 PSG8Q9UQ74 426 aa5.87□□□□□ -1.47
CSDE1-218ENST00000610726 PRUNE2Q8WUY3 3088 aa5.87□□□□□ -1.47
CSDE1-218ENST00000610726 A0A087WWC5 75 aa5.86□□□□□ -1.47
CSDE1-218ENST00000610726 A0A087X0M5 115 aa5.86□□□□□ -1.47
CSDE1-218ENST00000610726 TRAV8-1A0A0A6YYK1 113 aa5.86□□□□□ -1.47
CSDE1-218ENST00000610726 A0A1B0GX30 115 aa5.86□□□□□ -1.47
CSDE1-218ENST00000610726 C9JQL5 133 aa5.86□□□□□ -1.47
CSDE1-218ENST00000610726 TEX38Q6PEX7 206 aa5.86□□□□□ -1.47
CSDE1-218ENST00000610726 C1QL4Q86Z23 238 aa5.86□□□□□ -1.47
CSDE1-218ENST00000610726 NPIPB5A8MRT5 1133 aa5.86□□□□□ -1.47
CSDE1-218ENST00000610726 M0R3E3 92 aa5.86□□□□□ -1.47
CSDE1-218ENST00000610726 ATP6V0E1O15342 81 aa5.86□□□□□ -1.47
CSDE1-218ENST00000610726 CDX1P47902 265 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-218ENST00000610726 SPSB3Q6PJ21 355 aa5.86□□□□□ -1.47
CSDE1-218ENST00000610726 TMEM136Q6ZRR5 245 aa5.86□□□□□ -1.47
CSDE1-218ENST00000610726 CIARTQ8N365 385 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-218ENST00000610726 SSBP4Q9BWG4 385 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-218ENST00000610726 TRBV20OR9-2A0A075B6H5 130 aa5.86□□□□□ -1.47
CSDE1-218ENST00000610726 PSMB11A5LHX3 300 aa5.86□□□□□ -1.47
CSDE1-218ENST00000610726 VAMP3Q15836 100 aa5.86□□□□□ -1.47
CSDE1-218ENST00000610726 RRN3P1Q2M238 152 aa5.86□□□□□ -1.47
CSDE1-218ENST00000610726 MST1LQ2TV78 715 aa5.86□□□□□ -1.47
CSDE1-218ENST00000610726 PRR31Q5SQ13 230 aa5.86□□□□□ -1.47
CSDE1-218ENST00000610726 DMRTC2Q8IXT2 367 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-218ENST00000610726 NRGNQ92686 78 aa5.86□□□□□ -1.47
CSDE1-218ENST00000610726 BEX4Q9NWD9 120 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-218ENST00000610726 IGHV1-69DA0A0B4J2H0 117 aa5.85□□□□□ -1.47
CSDE1-218ENST00000610726 IGHV1-69P01742 117 aa5.85□□□□□ -1.47
CSDE1-218ENST00000610726 RNASE4P34096 147 aaKnown RBP5.85□□□□□ -1.47
CSDE1-218ENST00000610726 IL15RAQ13261 267 aa5.85□□□□□ -1.47
CSDE1-218ENST00000610726 FBLN7Q53RD9 439 aa5.85□□□□□ -1.47
CSDE1-218ENST00000610726 LINC00311Q8N616 119 aa5.85□□□□□ -1.47
CSDE1-218ENST00000610726 SYT8Q8NBV8 401 aa5.85□□□□□ -1.47
CSDE1-218ENST00000610726 LINC00479Q96M42 142 aa5.85□□□□□ -1.47
CSDE1-218ENST00000610726 SLC50A1Q9BRV3 221 aa5.85□□□□□ -1.47
CSDE1-218ENST00000610726 CHD9Q3L8U1 2897 aa5.85□□□□□ -1.47
CSDE1-218ENST00000610726 IGKV2-40A0A087WW87 121 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-218ENST00000610726 IGKV2D-40P01614 121 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-218ENST00000610726 IGHV2-70P01814 119 aa5.85□□□□□ -1.47
CSDE1-218ENST00000610726 CYB5R2Q6BCY4 276 aa5.85□□□□□ -1.47
CSDE1-218ENST00000610726 HAPLN4Q86UW8 402 aa5.85□□□□□ -1.47
CSDE1-218ENST00000610726 Q96MF0 132 aa5.85□□□□□ -1.47
CSDE1-218ENST00000610726 FABP5P3A8MUU1 101 aa5.85□□□□□ -1.47
CSDE1-218ENST00000610726 J3QKU1 62 aa5.85□□□□□ -1.47
CSDE1-218ENST00000610726 G0S2P27469 103 aa5.85□□□□□ -1.47
CSDE1-218ENST00000610726 ZNF56Q15929 161 aa5.85□□□□□ -1.47
CSDE1-218ENST00000610726 LINC01551Q86U37 167 aa5.85□□□□□ -1.47
CSDE1-218ENST00000610726 MAP1LC3AQ9H492 121 aa5.85□□□□□ -1.47
CSDE1-218ENST00000610726 ZNF462Q96JM2 2506 aa5.85□□□□□ -1.47
CSDE1-218ENST00000610726 NDUFB8O95169 186 aa5.85□□□□□ -1.47
CSDE1-218ENST00000610726 LDLRAD2Q5SZI1 272 aa5.85□□□□□ -1.47
CSDE1-218ENST00000610726 ATOH7Q8N100 152 aa5.85□□□□□ -1.47
CSDE1-218ENST00000610726 TUBA4BQ9H853 241 aa5.85□□□□□ -1.47
CSDE1-218ENST00000610726 TRBV9A0A0B4J1U6 114 aa5.84□□□□□ -1.47
CSDE1-218ENST00000610726 GZMBP10144 247 aa5.84□□□□□ -1.47
CSDE1-218ENST00000610726 ADCYAP1P18509 176 aa5.84□□□□□ -1.47
CSDE1-218ENST00000610726 SCGB1D4Q6XE38 83 aa5.84□□□□□ -1.47
CSDE1-218ENST00000610726 FER1L6-AS1Q8NA97 138 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms