RNA–Protein interactions for RNA: ENST00000610356.4

RDH13-223, Transcript of retinol dehydrogenase 13, human

TSL 1 (best) BASIC

Gene RDH13, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDH13-223	ENST00000610356	ZNF48	Q96MX3	618 aa	Predicted RBP	13.41	□□□□□ -0.26
RDH13-223	ENST00000610356	HIGD1A	Q9Y241	93 aa		13.41	□□□□□ -0.26
RDH13-223	ENST00000610356	ZNF320	A2RRD8	509 aa		13.41	□□□□□ -0.26
RDH13-223	ENST00000610356	GGTLC3	B5MD39	225 aa		13.41	□□□□□ -0.26
RDH13-223	ENST00000610356	ATP6V0E1	O15342	81 aa		13.41	□□□□□ -0.26
RDH13-223	ENST00000610356	GNG7	O60262	68 aa		13.41	□□□□□ -0.26
RDH13-223	ENST00000610356	GCG	P01275	180 aa		13.41	□□□□□ -0.26
RDH13-223	ENST00000610356	CNN1	P51911	297 aa	Known RBP	13.41	□□□□□ -0.26
RDH13-223	ENST00000610356	MFAP4	P55083	255 aa		13.41	□□□□□ -0.26
RDH13-223	ENST00000610356	KRTAP10-9	P60411	292 aa		13.41	□□□□□ -0.26
RDH13-223	ENST00000610356	YPEL3	P61236	119 aa	Predicted RBP	13.41	□□□□□ -0.26
RDH13-223	ENST00000610356	LINC01356	Q8N9X3	169 aa		13.41	□□□□□ -0.26
RDH13-223	ENST00000610356	OR10G8	Q8NGN5	311 aa		13.41	□□□□□ -0.26
RDH13-223	ENST00000610356	FAM110D	Q8TAY7	271 aa	Predicted RBP	13.41	□□□□□ -0.26
RDH13-223	ENST00000610356	TMUB1	Q9BVT8	246 aa		13.41	□□□□□ -0.26
RDH13-223	ENST00000610356	BEX4	Q9NWD9	120 aa	Predicted RBP	13.41	□□□□□ -0.26
RDH13-223	ENST00000610356	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	13.41	□□□□□ -0.26
RDH13-223	ENST00000610356		A0A096LNT2	108 aa		13.4	□□□□□ -0.26
RDH13-223	ENST00000610356	PGPEP1L	A6NFU8	196 aa		13.4	□□□□□ -0.26
RDH13-223	ENST00000610356	GZMB	P10144	247 aa		13.4	□□□□□ -0.26
RDH13-223	ENST00000610356	ECSCR	Q19T08	205 aa		13.4	□□□□□ -0.26
RDH13-223	ENST00000610356	C9orf152	Q5JTZ5	239 aa		13.4	□□□□□ -0.26
RDH13-223	ENST00000610356	UNQ5815/PRO19632	Q6UWF5	114 aa		13.4	□□□□□ -0.26
RDH13-223	ENST00000610356	TRAPPC1	Q9Y5R8	145 aa		13.4	□□□□□ -0.26
RDH13-223	ENST00000610356	OR2J3	O76001	311 aa		13.39	□□□□□ -0.27
RDH13-223	ENST00000610356	TOMM40	O96008	361 aa		13.39	□□□□□ -0.27
RDH13-223	ENST00000610356	TMEM219	Q86XT9	240 aa		13.39	□□□□□ -0.27
RDH13-223	ENST00000610356	PIFO	Q8TCI5	191 aa		13.39	□□□□□ -0.27
RDH13-223	ENST00000610356	FXYD5	Q96DB9	178 aa		13.39	□□□□□ -0.27
RDH13-223	ENST00000610356	TMEM68	Q96MH6	324 aa		13.39	□□□□□ -0.27
RDH13-223	ENST00000610356	C21orf62	Q9NYP8	219 aa		13.39	□□□□□ -0.27
RDH13-223	ENST00000610356	ZMAT5	Q9UDW3	170 aa	Known RBP	13.39	□□□□□ -0.27
RDH13-223	ENST00000610356		S4R3C0	116 aa		13.39	□□□□□ -0.27
RDH13-223	ENST00000610356	UTP20	O75691	2785 aa	Known RBP	13.39	□□□□□ -0.27
RDH13-223	ENST00000610356	NDUFB8	O95169	186 aa		13.39	□□□□□ -0.27
RDH13-223	ENST00000610356	SUMO1	P63165	101 aa	Known RBP	13.39	□□□□□ -0.27
RDH13-223	ENST00000610356	DEFA6	Q01524	100 aa		13.39	□□□□□ -0.27
RDH13-223	ENST00000610356		Q56UQ5	140 aa		13.39	□□□□□ -0.27
RDH13-223	ENST00000610356	TMEM18	Q96B42	140 aa		13.39	□□□□□ -0.27
RDH13-223	ENST00000610356	SCGB2A1	O75556	95 aa		13.38	□□□□□ -0.27
RDH13-223	ENST00000610356	CRYBB3	P26998	211 aa		13.38	□□□□□ -0.27
RDH13-223	ENST00000610356	DEFB113	Q30KQ7	82 aa		13.38	□□□□□ -0.27
RDH13-223	ENST00000610356	IL36B	Q9NZH7	164 aa		13.38	□□□□□ -0.27
RDH13-223	ENST00000610356	FBXL7	Q9UJT9	491 aa		13.38	□□□□□ -0.27
RDH13-223	ENST00000610356	ASH1L	Q9NR48	2969 aa	Known RBP	13.38	□□□□□ -0.27
RDH13-223	ENST00000610356	SH2D7	A6NKC9	451 aa	Predicted RBP	13.37	□□□□□ -0.27
RDH13-223	ENST00000610356	TSTD3	H0UI37	97 aa		13.37	□□□□□ -0.27
RDH13-223	ENST00000610356	LRRC75A-AS1	Q8N1F1	130 aa		13.37	□□□□□ -0.27
RDH13-223	ENST00000610356	GBGT1	Q8N5D6	347 aa		13.37	□□□□□ -0.27
RDH13-223	ENST00000610356	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	13.37	□□□□□ -0.27
RDH13-223	ENST00000610356		K7EN84	100 aa		13.37	□□□□□ -0.27
RDH13-223	ENST00000610356	LOXL1	Q08397	574 aa	Predicted RBP	13.37	□□□□□ -0.27
RDH13-223	ENST00000610356	MRPL27	Q9P0M9	148 aa	Known RBP	13.37	□□□□□ -0.27
RDH13-223	ENST00000610356		F8W735	103 aa	Predicted RBP	13.36	□□□□□ -0.27
RDH13-223	ENST00000610356		J3QLI3	93 aa		13.36	□□□□□ -0.27
RDH13-223	ENST00000610356	AVP	P01185	164 aa		13.36	□□□□□ -0.27
RDH13-223	ENST00000610356	GP9	P14770	177 aa		13.36	□□□□□ -0.27
RDH13-223	ENST00000610356	KLK9	Q2XQG4	91 aa		13.36	□□□□□ -0.27
RDH13-223	ENST00000610356	VN1R17P	Q8TDU5	208 aa		13.36	□□□□□ -0.27
RDH13-223	ENST00000610356	RNF125	Q96EQ8	232 aa		13.36	□□□□□ -0.27
RDH13-223	ENST00000610356	TXN2	Q99757	166 aa		13.36	□□□□□ -0.27
RDH13-223	ENST00000610356	KLK9	Q9UKQ9	250 aa		13.36	□□□□□ -0.27
RDH13-223	ENST00000610356	HELT	A6NFD8	242 aa		13.35	□□□□□ -0.27
RDH13-223	ENST00000610356	IL4	P05112	153 aa		13.35	□□□□□ -0.27
RDH13-223	ENST00000610356	DDT	P30046	118 aa		13.35	□□□□□ -0.27
RDH13-223	ENST00000610356	LEMD1	Q68G75	181 aa		13.35	□□□□□ -0.27
RDH13-223	ENST00000610356	ZNF491	Q8N8L2	437 aa		13.35	□□□□□ -0.27
RDH13-223	ENST00000610356	SOX21	Q9Y651	276 aa	Predicted RBP	13.35	□□□□□ -0.27
RDH13-223	ENST00000610356	WI2-2373I1.2	A0A1W2PRP0	233 aa		13.35	□□□□□ -0.27
RDH13-223	ENST00000610356		H3BUX3	64 aa		13.35	□□□□□ -0.27
RDH13-223	ENST00000610356	FCGR2B	P31994	310 aa	Predicted RBP	13.35	□□□□□ -0.27
RDH13-223	ENST00000610356	REC114	Q7Z4M0	266 aa		13.35	□□□□□ -0.27
RDH13-223	ENST00000610356	ZNF329	Q86UD4	541 aa		13.35	□□□□□ -0.27
RDH13-223	ENST00000610356	LINC01548	A6NM66	108 aa		13.34	□□□□□ -0.27
RDH13-223	ENST00000610356	RNF223	E7ERA6	249 aa		13.34	□□□□□ -0.27
RDH13-223	ENST00000610356		G3V318	75 aa		13.34	□□□□□ -0.27
RDH13-223	ENST00000610356	IGHV3-23	P01764	117 aa		13.34	□□□□□ -0.27
RDH13-223	ENST00000610356	AMY1A	P04745	511 aa		13.34	□□□□□ -0.27
RDH13-223	ENST00000610356	NBEAP1	P0C6P0	100 aa		13.34	□□□□□ -0.27
RDH13-223	ENST00000610356	GNG4	P50150	75 aa		13.34	□□□□□ -0.27
RDH13-223	ENST00000610356	LY6E	Q16553	131 aa		13.34	□□□□□ -0.27
RDH13-223	ENST00000610356		Q5PR19	223 aa		13.34	□□□□□ -0.27
RDH13-223	ENST00000610356	S100A7A	Q86SG5	101 aa		13.34	□□□□□ -0.27
RDH13-223	ENST00000610356	BLNK	Q8WV28	456 aa		13.34	□□□□□ -0.27
RDH13-223	ENST00000610356	C14orf144	Q96I85	54 aa		13.34	□□□□□ -0.27
RDH13-223	ENST00000610356	SHANK2-AS3	Q9BTD1	123 aa		13.34	□□□□□ -0.27
RDH13-223	ENST00000610356	TMEM14C	Q9P0S9	112 aa		13.34	□□□□□ -0.27
RDH13-223	ENST00000610356	ANKRD17	O75179	2603 aa	Known RBP	13.33	□□□□□ -0.27
RDH13-223	ENST00000610356		A6NDX4	124 aa		13.33	□□□□□ -0.28
RDH13-223	ENST00000610356		H3BRN7	92 aa		13.33	□□□□□ -0.28
RDH13-223	ENST00000610356	TGFA	P01135	160 aa		13.33	□□□□□ -0.28
RDH13-223	ENST00000610356	HNF1A	P20823	631 aa		13.33	□□□□□ -0.28
RDH13-223	ENST00000610356	RHOG	P84095	191 aa		13.33	□□□□□ -0.28
RDH13-223	ENST00000610356	C15orf32	Q32M92	178 aa		13.33	□□□□□ -0.28
RDH13-223	ENST00000610356	CENPW	Q5EE01	88 aa		13.33	□□□□□ -0.28
RDH13-223	ENST00000610356	NOL4L	Q96MY1	436 aa	Predicted RBP	13.33	□□□□□ -0.28
RDH13-223	ENST00000610356	ABCA1	O95477	2261 aa		13.33	□□□□□ -0.28
RDH13-223	ENST00000610356	TRBV9	A0A0B4J1U6	114 aa		13.33	□□□□□ -0.28
RDH13-223	ENST00000610356	OR2T8	A6NH00	312 aa		13.33	□□□□□ -0.28
RDH13-223	ENST00000610356	SNRPC	P09234	159 aa	Known RBP	13.33	□□□□□ -0.28

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