RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 L7N2F9 121 aa9.41□□□□□ -0.9
SHROOM1-207ENST00000606676 DEDDO75618 318 aa9.41□□□□□ -0.9
SHROOM1-207ENST00000606676 SIX6O95475 246 aa9.41□□□□□ -0.9
SHROOM1-207ENST00000606676 ZNF688P0C7X2 276 aa9.41□□□□□ -0.9
SHROOM1-207ENST00000606676 NUP62P37198 522 aaPredicted RBP9.41□□□□□ -0.9
SHROOM1-207ENST00000606676 VAMP2P63027 116 aa9.41□□□□□ -0.9
SHROOM1-207ENST00000606676 C1orf194Q5T5A4 169 aa9.41□□□□□ -0.9
SHROOM1-207ENST00000606676 CYP2G1PQ6ZSU1 146 aa9.41□□□□□ -0.9
SHROOM1-207ENST00000606676 BPIFCQ8NFQ6 507 aa9.41□□□□□ -0.9
SHROOM1-207ENST00000606676 GGACTQ9BVM4 153 aa9.41□□□□□ -0.9
SHROOM1-207ENST00000606676 CSTL1Q9H114 145 aa9.41□□□□□ -0.9
SHROOM1-207ENST00000606676 PFDN2Q9UHV9 154 aa9.41□□□□□ -0.9
SHROOM1-207ENST00000606676 SLC45A2Q9UMX9 530 aa9.41□□□□□ -0.9
SHROOM1-207ENST00000606676 TP53TG1Q9Y2A0 90 aa9.41□□□□□ -0.9
SHROOM1-207ENST00000606676 SACSQ9NZJ4 4579 aa9.4□□□□□ -0.9
SHROOM1-207ENST00000606676 FAM24AA6NFZ4 105 aa9.4□□□□□ -0.9
SHROOM1-207ENST00000606676 ORM2P19652 201 aa9.4□□□□□ -0.9
SHROOM1-207ENST00000606676 BCAP31P51572 246 aa9.4□□□□□ -0.9
SHROOM1-207ENST00000606676 CAV2P51636 162 aa9.4□□□□□ -0.9
SHROOM1-207ENST00000606676 S100A10P60903 97 aa9.4□□□□□ -0.9
SHROOM1-207ENST00000606676 DEFB135Q30KP9 77 aa9.4□□□□□ -0.9
SHROOM1-207ENST00000606676 RNF183Q96D59 192 aa9.4□□□□□ -0.9
SHROOM1-207ENST00000606676 C17orf77Q96MU5 243 aa9.4□□□□□ -0.9
SHROOM1-207ENST00000606676 LYRM2Q9NU23 88 aaPredicted RBP9.4□□□□□ -0.9
SHROOM1-207ENST00000606676 RYR3Q15413 4870 aa9.39□□□□□ -0.91
SHROOM1-207ENST00000606676 ZNF98A6NK75 572 aa9.39□□□□□ -0.91
SHROOM1-207ENST00000606676 KNCNA6PVL3 124 aa9.39□□□□□ -0.91
SHROOM1-207ENST00000606676 GOSR2O14653 212 aa9.39□□□□□ -0.91
SHROOM1-207ENST00000606676 SPRY2O43597 315 aa9.39□□□□□ -0.91
SHROOM1-207ENST00000606676 CST7O76096 145 aa9.39□□□□□ -0.91
SHROOM1-207ENST00000606676 H2BFSP57053 126 aa9.39□□□□□ -0.91
SHROOM1-207ENST00000606676 PLP1P60201 277 aa9.39□□□□□ -0.91
SHROOM1-207ENST00000606676 SLC38A11Q08AI6 406 aa9.39□□□□□ -0.91
SHROOM1-207ENST00000606676 PSMG4Q5JS54 123 aa9.39□□□□□ -0.91
SHROOM1-207ENST00000606676 TEPPQ6URK8 271 aa9.39□□□□□ -0.91
SHROOM1-207ENST00000606676 OR1B1Q8NGR6 318 aa9.39□□□□□ -0.91
SHROOM1-207ENST00000606676 SEPSECSQ9HD40 501 aaKnown RBP9.39□□□□□ -0.91
SHROOM1-207ENST00000606676 MGAT4CQ9UBM8 478 aa9.39□□□□□ -0.91
SHROOM1-207ENST00000606676 IGSF23A1L1A6 192 aa9.38□□□□□ -0.91
SHROOM1-207ENST00000606676 SOCS3O14543 225 aa9.38□□□□□ -0.91
SHROOM1-207ENST00000606676 GIG44P09565 113 aaPredicted RBP9.38□□□□□ -0.91
SHROOM1-207ENST00000606676 LINC00869P0C866 280 aa9.38□□□□□ -0.91
SHROOM1-207ENST00000606676 LYL1P12980 280 aa9.38□□□□□ -0.91
SHROOM1-207ENST00000606676 PVALBP20472 110 aaPredicted RBP9.38□□□□□ -0.91
SHROOM1-207ENST00000606676 SELENOTP62341 195 aa9.38□□□□□ -0.91
SHROOM1-207ENST00000606676 CASC10Q5T4H9 136 aa9.38□□□□□ -0.91
SHROOM1-207ENST00000606676 PATE2Q6UY27 113 aa9.38□□□□□ -0.91
SHROOM1-207ENST00000606676 TRPT1Q86TN4 253 aaKnown RBP9.38□□□□□ -0.91
SHROOM1-207ENST00000606676 STHQ8IWL8 128 aa9.38□□□□□ -0.91
SHROOM1-207ENST00000606676 OR8I2Q8N0Y5 310 aa9.38□□□□□ -0.91
SHROOM1-207ENST00000606676 TMEM252Q8N6L7 170 aa9.38□□□□□ -0.91
SHROOM1-207ENST00000606676 TMEM217Q8N7C4 229 aa9.38□□□□□ -0.91
SHROOM1-207ENST00000606676 PPP1R14BQ96C90 147 aa9.38□□□□□ -0.91
SHROOM1-207ENST00000606676 NMES1Q9C002 83 aa9.38□□□□□ -0.91
SHROOM1-207ENST00000606676 SLC25A32Q9H2D1 315 aa9.38□□□□□ -0.91
SHROOM1-207ENST00000606676 DOK5Q9P104 306 aa9.38□□□□□ -0.91
SHROOM1-207ENST00000606676 FBXL17Q9UF56 701 aa9.38□□□□□ -0.91
SHROOM1-207ENST00000606676 TENM2Q9NT68 2774 aa9.38□□□□□ -0.91
SHROOM1-207ENST00000606676 H0YIZ8 118 aa9.37□□□□□ -0.91
SHROOM1-207ENST00000606676 H3BRN7 92 aa9.37□□□□□ -0.91
SHROOM1-207ENST00000606676 AGPAT2O15120 278 aa9.37□□□□□ -0.91
SHROOM1-207ENST00000606676 SULT1A1P50225 295 aa9.37□□□□□ -0.91
SHROOM1-207ENST00000606676 SNRPD3P62318 126 aaKnown RBP9.37□□□□□ -0.91
SHROOM1-207ENST00000606676 VWC2Q2TAL6 325 aa9.37□□□□□ -0.91
SHROOM1-207ENST00000606676 ACTL10Q5JWF8 245 aa9.37□□□□□ -0.91
SHROOM1-207ENST00000606676 MGST2Q99735 147 aa9.37□□□□□ -0.91
SHROOM1-207ENST00000606676 TMEM147Q9BVK8 224 aa9.37□□□□□ -0.91
SHROOM1-207ENST00000606676 SCRT1Q9BWW7 348 aa9.37□□□□□ -0.91
SHROOM1-207ENST00000606676 SLC25A39Q9BZJ4 359 aaPredicted RBP9.37□□□□□ -0.91
SHROOM1-207ENST00000606676 SLC25A22Q9H936 323 aa9.37□□□□□ -0.91
SHROOM1-207ENST00000606676 HYPMO75409 117 aa9.36□□□□□ -0.91
SHROOM1-207ENST00000606676 S100A11P31949 105 aa9.36□□□□□ -0.91
SHROOM1-207ENST00000606676 UHRF2Q96PU4 802 aa9.36□□□□□ -0.91
SHROOM1-207ENST00000606676 SHANK2-AS3Q9BTD1 123 aa9.36□□□□□ -0.91
SHROOM1-207ENST00000606676 RSG1Q9BU20 258 aa9.36□□□□□ -0.91
SHROOM1-207ENST00000606676 UQCC1Q9NVA1 299 aa9.36□□□□□ -0.91
SHROOM1-207ENST00000606676 OR5AC2Q9NZP5 309 aa9.36□□□□□ -0.91
SHROOM1-207ENST00000606676 HIGD1AQ9Y241 93 aa9.36□□□□□ -0.91
SHROOM1-207ENST00000606676 PLECQ15149 4684 aaKnown RBP9.36□□□□□ -0.91
SHROOM1-207ENST00000606676 SSNA1O43805 119 aa9.35□□□□□ -0.91
SHROOM1-207ENST00000606676 CA1P00915 261 aaPredicted RBP9.35□□□□□ -0.91
SHROOM1-207ENST00000606676 GALR1P47211 349 aa9.35□□□□□ -0.91
SHROOM1-207ENST00000606676 PSMB3P49720 205 aa9.35□□□□□ -0.91
SHROOM1-207ENST00000606676 DEFB1P60022 68 aa9.35□□□□□ -0.91
SHROOM1-207ENST00000606676 RAP2BP61225 183 aa9.35□□□□□ -0.91
SHROOM1-207ENST00000606676 CYCSP99999 105 aaKnown RBP9.35□□□□□ -0.91
SHROOM1-207ENST00000606676 EWSR1Q01844 656 aaKnown RBP eCLIP9.35□□□□□ -0.91
SHROOM1-207ENST00000606676 GDF5OSQ5U4N7 250 aa9.35□□□□□ -0.91
SHROOM1-207ENST00000606676 ZFAND6Q6FIF0 208 aa9.35□□□□□ -0.91
SHROOM1-207ENST00000606676 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.35□□□□□ -0.91
SHROOM1-207ENST00000606676 ZNF546Q86UE3 836 aa9.35□□□□□ -0.91
SHROOM1-207ENST00000606676 GATAD1Q8WUU5 269 aa9.35□□□□□ -0.91
SHROOM1-207ENST00000606676 ARL6Q9H0F7 186 aa9.35□□□□□ -0.91
SHROOM1-207ENST00000606676 WDR83OSQ9Y284 106 aa9.35□□□□□ -0.91
SHROOM1-207ENST00000606676 A0A0J9YWU9 116 aa9.34□□□□□ -0.91
SHROOM1-207ENST00000606676 E5RGE8 158 aa9.34□□□□□ -0.91
SHROOM1-207ENST00000606676 H3BMM0 161 aa9.34□□□□□ -0.91
SHROOM1-207ENST00000606676 ISLRO14498 428 aa9.34□□□□□ -0.91
SHROOM1-207ENST00000606676 PTTG1O95997 202 aa9.34□□□□□ -0.91
SHROOM1-207ENST00000606676 RLN2P04090 185 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms