RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 CIARTQ8N365 385 aaPredicted RBP12.2□□□□□ -0.46
LYSMD4-211ENST00000604213 TPSG1Q9NRR2 321 aa12.2□□□□□ -0.46
LYSMD4-211ENST00000604213 TECTAO75443 2155 aa12.2□□□□□ -0.46
LYSMD4-211ENST00000604213 CSN3P07498 182 aa12.2□□□□□ -0.46
LYSMD4-211ENST00000604213 COL8A1P27658 744 aa12.2□□□□□ -0.46
LYSMD4-211ENST00000604213 CCL11P51671 97 aa12.2□□□□□ -0.46
LYSMD4-211ENST00000604213 MRGPRG-AS1Q2M3A8 158 aa12.2□□□□□ -0.46
LYSMD4-211ENST00000604213 TIMM23BQ5SRD1 257 aa12.2□□□□□ -0.46
LYSMD4-211ENST00000604213 PVRIGQ6DKI7 326 aa12.2□□□□□ -0.46
LYSMD4-211ENST00000604213 Q71RC1 249 aaPredicted RBP12.2□□□□□ -0.46
LYSMD4-211ENST00000604213 FDCSPQ8NFU4 85 aa12.2□□□□□ -0.46
LYSMD4-211ENST00000604213 OR10X1Q8NGY0 326 aa12.2□□□□□ -0.46
LYSMD4-211ENST00000604213 PEF1Q9UBV8 284 aaKnown RBP12.2□□□□□ -0.46
LYSMD4-211ENST00000604213 ZDBF2Q9HCK1 2354 aa12.2□□□□□ -0.46
LYSMD4-211ENST00000604213 TRAV8-1A0A0A6YYK1 113 aa12.19□□□□□ -0.46
LYSMD4-211ENST00000604213 GAGE12BA1L429 117 aa12.19□□□□□ -0.46
LYSMD4-211ENST00000604213 HTR1DP28221 377 aa12.19□□□□□ -0.46
LYSMD4-211ENST00000604213 ZNF747Q9BV97 191 aa12.19□□□□□ -0.46
LYSMD4-211ENST00000604213 IGLV2-11P01706 119 aa12.19□□□□□ -0.46
LYSMD4-211ENST00000604213 IGLC1P0CG04 106 aa12.19□□□□□ -0.46
LYSMD4-211ENST00000604213 WT1P19544 449 aaPredicted RBP12.19□□□□□ -0.46
LYSMD4-211ENST00000604213 HCP5Q6MZN7 132 aa12.19□□□□□ -0.46
LYSMD4-211ENST00000604213 ZNF474Q6S9Z5 364 aaPredicted RBP12.19□□□□□ -0.46
LYSMD4-211ENST00000604213 GPR179Q6PRD1 2367 aa12.18□□□□□ -0.46
LYSMD4-211ENST00000604213 ICE1Q9Y2F5 2266 aa12.18□□□□□ -0.46
LYSMD4-211ENST00000604213 ZNF785A8K8V0 405 aa12.18□□□□□ -0.46
LYSMD4-211ENST00000604213 SLC25A17O43808 307 aa12.18□□□□□ -0.46
LYSMD4-211ENST00000604213 NCR2O95944 276 aa12.18□□□□□ -0.46
LYSMD4-211ENST00000604213 MEF2CQ06413 473 aaPredicted RBP12.18□□□□□ -0.46
LYSMD4-211ENST00000604213 RITA1Q96K30 269 aa12.18□□□□□ -0.46
LYSMD4-211ENST00000604213 TIMM8BQ9Y5J9 83 aaPredicted RBP12.18□□□□□ -0.46
LYSMD4-211ENST00000604213 C7orf71A4D174 169 aa12.18□□□□□ -0.46
LYSMD4-211ENST00000604213 C19orf67A6NJJ6 358 aa12.18□□□□□ -0.46
LYSMD4-211ENST00000604213 FCN3O75636 299 aa12.18□□□□□ -0.46
LYSMD4-211ENST00000604213 TMEM200BQ69YZ2 307 aa12.18□□□□□ -0.46
LYSMD4-211ENST00000604213 C8orf46Q8TAG6 207 aa12.18□□□□□ -0.46
LYSMD4-211ENST00000604213 OTORQ9NRC9 128 aa12.18□□□□□ -0.46
LYSMD4-211ENST00000604213 NKX2-8O15522 239 aa12.17□□□□□ -0.46
LYSMD4-211ENST00000604213 SNAI2O43623 268 aa12.17□□□□□ -0.46
LYSMD4-211ENST00000604213 HOXB4P17483 251 aaPredicted RBP12.17□□□□□ -0.46
LYSMD4-211ENST00000604213 PLP1P60201 277 aa12.17□□□□□ -0.46
LYSMD4-211ENST00000604213 C3orf36Q3SXR2 165 aa12.17□□□□□ -0.46
LYSMD4-211ENST00000604213 PRNTQ86SH4 94 aa12.17□□□□□ -0.46
LYSMD4-211ENST00000604213 BPIFA4PQ86YQ2 179 aa12.17□□□□□ -0.46
LYSMD4-211ENST00000604213 TEX45Q8NA69 505 aa12.17□□□□□ -0.46
LYSMD4-211ENST00000604213 TMEM116Q8NCL8 245 aa12.17□□□□□ -0.46
LYSMD4-211ENST00000604213 AP5S1Q9NUS5 200 aa12.17□□□□□ -0.46
LYSMD4-211ENST00000604213 SPENQ96T58 3664 aaKnown RBP12.17□□□□□ -0.46
LYSMD4-211ENST00000604213 A0A1B0GUT8 65 aa12.16□□□□□ -0.46
LYSMD4-211ENST00000604213 SEC11AP67812 179 aa12.16□□□□□ -0.46
LYSMD4-211ENST00000604213 VMA21Q3ZAQ7 101 aa12.16□□□□□ -0.46
LYSMD4-211ENST00000604213 TMEM97Q5BJF2 176 aa12.16□□□□□ -0.46
LYSMD4-211ENST00000604213 GATD1Q8NB37 220 aa12.16□□□□□ -0.46
LYSMD4-211ENST00000604213 ZC2HC1AQ96GY0 325 aa12.16□□□□□ -0.46
LYSMD4-211ENST00000604213 IGHV3-21A0A0B4J1V1 117 aa12.16□□□□□ -0.46
LYSMD4-211ENST00000604213 MBD3L4A6NDZ8 208 aaPredicted RBP12.16□□□□□ -0.46
LYSMD4-211ENST00000604213 MBD3L3A6NE82 208 aaPredicted RBP12.16□□□□□ -0.46
LYSMD4-211ENST00000604213 MBD3L5A6NJ08 208 aaPredicted RBP12.16□□□□□ -0.46
LYSMD4-211ENST00000604213 ARMS2P0C7Q2 107 aa12.16□□□□□ -0.46
LYSMD4-211ENST00000604213 FGF6P10767 208 aa12.16□□□□□ -0.46
LYSMD4-211ENST00000604213 GOLT1AQ6ZVE7 132 aa12.16□□□□□ -0.46
LYSMD4-211ENST00000604213 MBD3L2Q8NHZ7 208 aaPredicted RBP12.16□□□□□ -0.46
LYSMD4-211ENST00000604213 TMEM186Q96B77 213 aa12.16□□□□□ -0.46
LYSMD4-211ENST00000604213 CSTL1Q9H114 145 aa12.16□□□□□ -0.46
LYSMD4-211ENST00000604213 TRIOBPQ9H2D6 2365 aa12.16□□□□□ -0.46
LYSMD4-211ENST00000604213 TRAV17A0A0B4J275 112 aa12.15□□□□□ -0.46
LYSMD4-211ENST00000604213 K7ERU9 68 aa12.15□□□□□ -0.46
LYSMD4-211ENST00000604213 SRSF6Q13247 344 aaKnown RBP12.15□□□□□ -0.46
LYSMD4-211ENST00000604213 IGFL2Q6UWQ7 119 aa12.15□□□□□ -0.46
LYSMD4-211ENST00000604213 PLXNB1O43157 2135 aa12.15□□□□□ -0.46
LYSMD4-211ENST00000604213 TRBV6-1A0A0K0K1D8 114 aa12.15□□□□□ -0.46
LYSMD4-211ENST00000604213 RIGQ13278 110 aa12.15□□□□□ -0.46
LYSMD4-211ENST00000604213 EXOC3-AS1Q8N2X6 119 aa12.15□□□□□ -0.46
LYSMD4-211ENST00000604213 LINC00311Q8N616 119 aa12.15□□□□□ -0.46
LYSMD4-211ENST00000604213 SRSF12Q8WXF0 261 aaKnown RBP12.15□□□□□ -0.46
LYSMD4-211ENST00000604213 HIGD1AQ9Y241 93 aa12.15□□□□□ -0.46
LYSMD4-211ENST00000604213 PPIAL4DF5H284 164 aa12.14□□□□□ -0.47
LYSMD4-211ENST00000604213 CDX4O14627 284 aaPredicted RBP12.14□□□□□ -0.47
LYSMD4-211ENST00000604213 UFSP1Q6NVU6 142 aa12.14□□□□□ -0.47
LYSMD4-211ENST00000604213 FA2HQ7L5A8 372 aa12.14□□□□□ -0.47
LYSMD4-211ENST00000604213 OR10AG1Q8NH19 301 aa12.14□□□□□ -0.47
LYSMD4-211ENST00000604213 TMEM14CQ9P0S9 112 aa12.14□□□□□ -0.47
LYSMD4-211ENST00000604213 LOC400499M0QZD8 3231 aa12.14□□□□□ -0.47
LYSMD4-211ENST00000604213 CSN1S1P47710 185 aa12.14□□□□□ -0.47
LYSMD4-211ENST00000604213 PIP4P2Q8N4L2 257 aa12.14□□□□□ -0.47
LYSMD4-211ENST00000604213 ZADH2Q8N4Q0 377 aa12.14□□□□□ -0.47
LYSMD4-211ENST00000604213 PLCE1Q9P212 2302 aa12.14□□□□□ -0.47
LYSMD4-211ENST00000604213 GAGE10A6NGK3 116 aa12.13□□□□□ -0.47
LYSMD4-211ENST00000604213 M0R296 226 aa12.13□□□□□ -0.47
LYSMD4-211ENST00000604213 KLK10O43240 276 aa12.13□□□□□ -0.47
LYSMD4-211ENST00000604213 CCL8P80075 99 aa12.13□□□□□ -0.47
LYSMD4-211ENST00000604213 C8orf31Q8N9H6 132 aa12.13□□□□□ -0.47
LYSMD4-211ENST00000604213 PRSS3P2Q8NHM4 247 aa12.13□□□□□ -0.47
LYSMD4-211ENST00000604213 DPF1Q92782 380 aa12.13□□□□□ -0.47
LYSMD4-211ENST00000604213 A0A096LNJ9 63 aa12.13□□□□□ -0.47
LYSMD4-211ENST00000604213 FAM106CPP0CH98 169 aa12.13□□□□□ -0.47
LYSMD4-211ENST00000604213 APELAP0DMC3 54 aa12.13□□□□□ -0.47
LYSMD4-211ENST00000604213 FAM106AQ4KMX7 169 aa12.13□□□□□ -0.47
LYSMD4-211ENST00000604213 C22orf34Q6ZV56 151 aa12.13□□□□□ -0.47
LYSMD4-211ENST00000604213 PRO3102Q9H379 93 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms