RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 C1orf194Q5T5A4 169 aa11.02□□□□□ -0.65
SSBP4-211ENST00000601614 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.02□□□□□ -0.65
SSBP4-211ENST00000601614 CACNG5Q9UF02 275 aa11.02□□□□□ -0.65
SSBP4-211ENST00000601614 TRAV26-1A0A087WT03 109 aa11.01□□□□□ -0.65
SSBP4-211ENST00000601614 CEBPZOSA8MTT3 80 aa11.01□□□□□ -0.65
SSBP4-211ENST00000601614 NMSQ5H8A3 153 aa11.01□□□□□ -0.65
SSBP4-211ENST00000601614 IGFL4Q6B9Z1 124 aa11.01□□□□□ -0.65
SSBP4-211ENST00000601614 SNX29P2Q8IUI4 249 aa11.01□□□□□ -0.65
SSBP4-211ENST00000601614 RXFP4Q8TDU9 374 aa11.01□□□□□ -0.65
SSBP4-211ENST00000601614 GNPNAT1Q96EK6 184 aaPredicted RBP11.01□□□□□ -0.65
SSBP4-211ENST00000601614 C16orf92Q96LL3 132 aa11.01□□□□□ -0.65
SSBP4-211ENST00000601614 MRPS16Q9Y3D3 137 aaKnown RBP11.01□□□□□ -0.65
SSBP4-211ENST00000601614 A0A0J9YY99 117 aa11□□□□□ -0.65
SSBP4-211ENST00000601614 RPS19P39019 145 aaKnown RBP11□□□□□ -0.65
SSBP4-211ENST00000601614 HAMPP81172 84 aa11□□□□□ -0.65
SSBP4-211ENST00000601614 OR5I1Q13606 314 aa11□□□□□ -0.65
SSBP4-211ENST00000601614 MEF2DQ14814 521 aa11□□□□□ -0.65
SSBP4-211ENST00000601614 OR8I2Q8N0Y5 310 aa11□□□□□ -0.65
SSBP4-211ENST00000601614 SLC25A39Q9BZJ4 359 aaPredicted RBP11□□□□□ -0.65
SSBP4-211ENST00000601614 SLC25A32Q9H2D1 315 aa11□□□□□ -0.65
SSBP4-211ENST00000601614 ZNF701M0R085 212 aaPredicted RBP10.99□□□□□ -0.65
SSBP4-211ENST00000601614 CDS2O95674 445 aa10.99□□□□□ -0.65
SSBP4-211ENST00000601614 OR5AC1P0C628 307 aa10.99□□□□□ -0.65
SSBP4-211ENST00000601614 DNAH10OSP0CZ25 163 aa10.99□□□□□ -0.65
SSBP4-211ENST00000601614 HOXA5P20719 270 aa10.99□□□□□ -0.65
SSBP4-211ENST00000601614 B2MP61769 119 aa10.99□□□□□ -0.65
SSBP4-211ENST00000601614 OR2F1Q13607 317 aa10.99□□□□□ -0.65
SSBP4-211ENST00000601614 KLF9Q13886 244 aaPredicted RBP10.99□□□□□ -0.65
SSBP4-211ENST00000601614 FAM219AQ8IW50 185 aa10.99□□□□□ -0.65
SSBP4-211ENST00000601614 ARRDC1Q8N5I2 433 aa10.99□□□□□ -0.65
SSBP4-211ENST00000601614 OR13C8Q8NGS7 320 aa10.99□□□□□ -0.65
SSBP4-211ENST00000601614 GLYATL2Q8WU03 294 aa10.99□□□□□ -0.65
SSBP4-211ENST00000601614 PTTG2Q9NZH5 202 aa10.99□□□□□ -0.65
SSBP4-211ENST00000601614 COPZ2Q9P299 210 aa10.99□□□□□ -0.65
SSBP4-211ENST00000601614 PFDN2Q9UHV9 154 aa10.99□□□□□ -0.65
SSBP4-211ENST00000601614 TNFRSF18Q9Y5U5 241 aa10.99□□□□□ -0.65
SSBP4-211ENST00000601614 TRAV8-2A0A0B4J237 113 aa10.98□□□□□ -0.65
SSBP4-211ENST00000601614 ZFP92A6NM28 416 aa10.98□□□□□ -0.65
SSBP4-211ENST00000601614 J3QL48 77 aa10.98□□□□□ -0.65
SSBP4-211ENST00000601614 GAMTQ14353 236 aa10.98□□□□□ -0.65
SSBP4-211ENST00000601614 RNASE12Q5GAN4 147 aaKnown RBP10.98□□□□□ -0.65
SSBP4-211ENST00000601614 CDPF1Q6NVV7 123 aa10.98□□□□□ -0.65
SSBP4-211ENST00000601614 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.98□□□□□ -0.65
SSBP4-211ENST00000601614 SELENOHQ8IZQ5 122 aaKnown RBP10.98□□□□□ -0.65
SSBP4-211ENST00000601614 OR4D10Q8NGI6 311 aa10.98□□□□□ -0.65
SSBP4-211ENST00000601614 ZNF503Q96F45 646 aa10.98□□□□□ -0.65
SSBP4-211ENST00000601614 LINC01587Q99440 93 aa10.98□□□□□ -0.65
SSBP4-211ENST00000601614 TMEM222Q9H0R3 208 aa10.98□□□□□ -0.65
SSBP4-211ENST00000601614 NOP10Q9NPE3 64 aaKnown RBP10.98□□□□□ -0.65
SSBP4-211ENST00000601614 TIMM8BQ9Y5J9 83 aaPredicted RBP10.98□□□□□ -0.65
SSBP4-211ENST00000601614 PRB4P10163 310 aaPredicted RBP10.97□□□□□ -0.65
SSBP4-211ENST00000601614 HTN1P15515 57 aa10.97□□□□□ -0.65
SSBP4-211ENST00000601614 M6PRP20645 277 aa10.97□□□□□ -0.65
SSBP4-211ENST00000601614 ICAM4Q14773 271 aa10.97□□□□□ -0.65
SSBP4-211ENST00000601614 CROCCP3Q8IVE0 287 aa10.97□□□□□ -0.65
SSBP4-211ENST00000601614 RNF182Q8N6D2 247 aa10.97□□□□□ -0.65
SSBP4-211ENST00000601614 LINC00612Q8N6U2 182 aa10.97□□□□□ -0.65
SSBP4-211ENST00000601614 RNASE8Q8TDE3 154 aaKnown RBP10.97□□□□□ -0.65
SSBP4-211ENST00000601614 RBPMSQ93062 196 aaKnown RBP10.97□□□□□ -0.65
SSBP4-211ENST00000601614 PPP1R14BQ96C90 147 aa10.97□□□□□ -0.65
SSBP4-211ENST00000601614 C16orf74Q96GX8 76 aa10.97□□□□□ -0.65
SSBP4-211ENST00000601614 RSG1Q9BU20 258 aa10.97□□□□□ -0.65
SSBP4-211ENST00000601614 IGKV1OR2-108A0A075B7D4 117 aa10.96□□□□□ -0.65
SSBP4-211ENST00000601614 BOLA2-SMG1P6H3BVE0 249 aa10.96□□□□□ -0.65
SSBP4-211ENST00000601614 DUSP14O95147 198 aaKnown RBP10.96□□□□□ -0.65
SSBP4-211ENST00000601614 CD3DP04234 171 aa10.96□□□□□ -0.65
SSBP4-211ENST00000601614 MEOX2P50222 304 aa10.96□□□□□ -0.65
SSBP4-211ENST00000601614 TAS2R60P59551 318 aa10.96□□□□□ -0.65
SSBP4-211ENST00000601614 RNASE10Q5GAN6 216 aaKnown RBP10.96□□□□□ -0.65
SSBP4-211ENST00000601614 GPR141Q7Z602 305 aa10.96□□□□□ -0.65
SSBP4-211ENST00000601614 CCDC71LQ8N9Z2 235 aa10.96□□□□□ -0.65
SSBP4-211ENST00000601614 SLC25A22Q9H936 323 aa10.96□□□□□ -0.65
SSBP4-211ENST00000601614 RAB26Q9ULW5 256 aa10.96□□□□□ -0.65
SSBP4-211ENST00000601614 SNRPGP15A8MWD9 76 aa10.95□□□□□ -0.66
SSBP4-211ENST00000601614 ERVFC1-1P60608 527 aa10.95□□□□□ -0.66
SSBP4-211ENST00000601614 NEDD8Q15843 81 aa10.95□□□□□ -0.66
SSBP4-211ENST00000601614 SAMD13Q5VXD3 122 aa10.95□□□□□ -0.66
SSBP4-211ENST00000601614 MARCH1Q8TCQ1 289 aa10.95□□□□□ -0.66
SSBP4-211ENST00000601614 ZNF98A6NK75 572 aa10.94□□□□□ -0.66
SSBP4-211ENST00000601614 GALR1P47211 349 aa10.94□□□□□ -0.66
SSBP4-211ENST00000601614 Q6ZSN1 163 aa10.94□□□□□ -0.66
SSBP4-211ENST00000601614 TMEM144Q7Z5S9 345 aa10.94□□□□□ -0.66
SSBP4-211ENST00000601614 NOXA1Q86UR1 476 aa10.94□□□□□ -0.66
SSBP4-211ENST00000601614 ZFAND1Q8TCF1 268 aa10.94□□□□□ -0.66
SSBP4-211ENST00000601614 RTBDNQ9BSG5 229 aaPredicted RBP10.94□□□□□ -0.66
SSBP4-211ENST00000601614 COMMD3Q9UBI1 195 aa10.94□□□□□ -0.66
SSBP4-211ENST00000601614 HMCN2Q8NDA2 5059 aa10.94□□□□□ -0.66
SSBP4-211ENST00000601614 A0A087WTM6 91 aa10.93□□□□□ -0.66
SSBP4-211ENST00000601614 TEX13DA0A0J9YY54 714 aaPredicted RBP10.93□□□□□ -0.66
SSBP4-211ENST00000601614 EREGO14944 169 aa10.93□□□□□ -0.66
SSBP4-211ENST00000601614 B3GALNT1O75752 331 aa10.93□□□□□ -0.66
SSBP4-211ENST00000601614 APOA1P02647 267 aa10.93□□□□□ -0.66
SSBP4-211ENST00000601614 LSM3P62310 102 aaKnown RBP10.93□□□□□ -0.66
SSBP4-211ENST00000601614 TMEM268Q5VZI3 342 aa10.93□□□□□ -0.66
SSBP4-211ENST00000601614 LGI3Q8N145 548 aa10.93□□□□□ -0.66
SSBP4-211ENST00000601614 TMEM256Q8N2U0 113 aa10.93□□□□□ -0.66
SSBP4-211ENST00000601614 OR10J6PQ8NGY7 276 aa10.93□□□□□ -0.66
SSBP4-211ENST00000601614 TERB2Q8NHR7 220 aa10.93□□□□□ -0.66
SSBP4-211ENST00000601614 TMEM263Q8WUH6 116 aaKnown RBP10.93□□□□□ -0.66
SSBP4-211ENST00000601614 VSIG2Q96IQ7 327 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms