RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 PLAC8L1A1L4L8 177 aa11.69□□□□□ -0.54
USE1-208ENST00000600970 CRXO43186 299 aaPredicted RBP11.69□□□□□ -0.54
USE1-208ENST00000600970 TNFAIP8O95379 198 aa11.69□□□□□ -0.54
USE1-208ENST00000600970 ATP5G1P05496 136 aa11.69□□□□□ -0.54
USE1-208ENST00000600970 ATP5G3P48201 142 aa11.69□□□□□ -0.54
USE1-208ENST00000600970 GAMTQ14353 236 aa11.69□□□□□ -0.54
USE1-208ENST00000600970 SSX7Q7RTT5 188 aa11.69□□□□□ -0.54
USE1-208ENST00000600970 RNF141Q8WVD5 230 aa11.69□□□□□ -0.54
USE1-208ENST00000600970 C16orf92Q96LL3 132 aa11.69□□□□□ -0.54
USE1-208ENST00000600970 Q9H8V8 135 aa11.69□□□□□ -0.54
USE1-208ENST00000600970 U3KQ87 197 aa11.69□□□□□ -0.54
USE1-208ENST00000600970 M0R2Z0 102 aa11.68□□□□□ -0.54
USE1-208ENST00000600970 AZU1P20160 251 aa11.68□□□□□ -0.54
USE1-208ENST00000600970 TSPOP30536 169 aa11.68□□□□□ -0.54
USE1-208ENST00000600970 MEOX2P50222 304 aa11.68□□□□□ -0.54
USE1-208ENST00000600970 SPINK13Q1W4C9 94 aa11.68□□□□□ -0.54
USE1-208ENST00000600970 SAMD13Q5VXD3 122 aa11.68□□□□□ -0.54
USE1-208ENST00000600970 TMEM229BQ8NBD8 167 aa11.68□□□□□ -0.54
USE1-208ENST00000600970 OR11H7Q8NGC8 314 aa11.68□□□□□ -0.54
USE1-208ENST00000600970 PPP1R14BQ96C90 147 aa11.68□□□□□ -0.54
USE1-208ENST00000600970 KRTAP1-5Q9BYS1 174 aa11.68□□□□□ -0.54
USE1-208ENST00000600970 C14orf166Q9Y224 244 aaKnown RBP11.68□□□□□ -0.54
USE1-208ENST00000600970 CBY3A6NI87 242 aa11.67□□□□□ -0.54
USE1-208ENST00000600970 SNRPGP15A8MWD9 76 aa11.67□□□□□ -0.54
USE1-208ENST00000600970 EPM2AB3EWF7 344 aa11.67□□□□□ -0.54
USE1-208ENST00000600970 FAM25AB3EWG3 89 aa11.67□□□□□ -0.54
USE1-208ENST00000600970 FAM25CB3EWG5 89 aa11.67□□□□□ -0.54
USE1-208ENST00000600970 FAM25GB3EWG6 89 aa11.67□□□□□ -0.54
USE1-208ENST00000600970 RAB3DO95716 219 aa11.67□□□□□ -0.54
USE1-208ENST00000600970 INSP01308 110 aa11.67□□□□□ -0.54
USE1-208ENST00000600970 SULT1A3P0DMM9 295 aa11.67□□□□□ -0.54
USE1-208ENST00000600970 SULT1A4P0DMN0 295 aa11.67□□□□□ -0.54
USE1-208ENST00000600970 CNN1P51911 297 aaKnown RBP11.67□□□□□ -0.54
USE1-208ENST00000600970 B2MP61769 119 aa11.67□□□□□ -0.54
USE1-208ENST00000600970 OR2F1Q13607 317 aa11.67□□□□□ -0.54
USE1-208ENST00000600970 CLINT1Q14677 625 aa11.67□□□□□ -0.54
USE1-208ENST00000600970 LGI3Q8N145 548 aa11.67□□□□□ -0.54
USE1-208ENST00000600970 OR4C16Q8NGL9 310 aa11.67□□□□□ -0.54
USE1-208ENST00000600970 DTD1Q8TEA8 209 aa11.67□□□□□ -0.54
USE1-208ENST00000600970 C17orf77Q96MU5 243 aa11.67□□□□□ -0.54
USE1-208ENST00000600970 CACFD1Q9UGQ2 172 aa11.67□□□□□ -0.54
USE1-208ENST00000600970 GPX4P36969 197 aaPredicted RBP11.66□□□□□ -0.54
USE1-208ENST00000600970 TAS2R19P59542 299 aa11.66□□□□□ -0.54
USE1-208ENST00000600970 NCS1P62166 190 aa11.66□□□□□ -0.54
USE1-208ENST00000600970 STEAP1BQ6NZ63 245 aa11.66□□□□□ -0.54
USE1-208ENST00000600970 BAP18Q8IXM2 172 aa11.66□□□□□ -0.54
USE1-208ENST00000600970 SLC35E1Q96K37 410 aa11.66□□□□□ -0.54
USE1-208ENST00000600970 SLC25A32Q9H2D1 315 aa11.66□□□□□ -0.54
USE1-208ENST00000600970 TMEM56-RWDD3S4R434 201 aa11.66□□□□□ -0.54
USE1-208ENST00000600970 CRYM-AS1A6NIL9 109 aa11.65□□□□□ -0.54
USE1-208ENST00000600970 GABARAPH6UMI1 98 aa11.65□□□□□ -0.54
USE1-208ENST00000600970 DUSP14O95147 198 aaKnown RBP11.65□□□□□ -0.54
USE1-208ENST00000600970 GABARAPO95166 117 aa11.65□□□□□ -0.54
USE1-208ENST00000600970 ATP6V1G2O95670 118 aa11.65□□□□□ -0.54
USE1-208ENST00000600970 FABP1P07148 127 aa11.65□□□□□ -0.54
USE1-208ENST00000600970 BTF3P20290 206 aaKnown RBP11.65□□□□□ -0.54
USE1-208ENST00000600970 GALR1P47211 349 aa11.65□□□□□ -0.54
USE1-208ENST00000600970 TTC32Q5I0X7 151 aa11.65□□□□□ -0.54
USE1-208ENST00000600970 GPR107Q5VW38 600 aa11.65□□□□□ -0.54
USE1-208ENST00000600970 FAAP20Q6NZ36 180 aa11.65□□□□□ -0.54
USE1-208ENST00000600970 RSG1Q9BU20 258 aa11.65□□□□□ -0.54
USE1-208ENST00000600970 RBKSQ9H477 322 aa11.65□□□□□ -0.54
USE1-208ENST00000600970 HSPB7Q9UBY9 170 aa11.65□□□□□ -0.54
USE1-208ENST00000600970 VBP1P61758 197 aa11.64□□□□□ -0.55
USE1-208ENST00000600970 IGFL4Q6B9Z1 124 aa11.64□□□□□ -0.55
USE1-208ENST00000600970 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.64□□□□□ -0.55
USE1-208ENST00000600970 GPR141Q7Z602 305 aa11.64□□□□□ -0.55
USE1-208ENST00000600970 TRGV9Q99603 122 aa11.64□□□□□ -0.55
USE1-208ENST00000600970 Q9H3A6 140 aa11.64□□□□□ -0.55
USE1-208ENST00000600970 SLC25A22Q9H936 323 aa11.64□□□□□ -0.55
USE1-208ENST00000600970 PRR13Q9NZ81 148 aa11.64□□□□□ -0.55
USE1-208ENST00000600970 EXTL2Q9UBQ6 330 aa11.64□□□□□ -0.55
USE1-208ENST00000600970 GPR132Q9UNW8 380 aa11.64□□□□□ -0.55
USE1-208ENST00000600970 TRAV12-2A0A075B6T6 113 aa11.63□□□□□ -0.55
USE1-208ENST00000600970 IGKV1OR2-108A0A075B7D4 117 aa11.63□□□□□ -0.55
USE1-208ENST00000600970 ZNF98A6NK75 572 aa11.63□□□□□ -0.55
USE1-208ENST00000600970 INAFM2P0DMQ5 153 aa11.63□□□□□ -0.55
USE1-208ENST00000600970 CCR6P51684 374 aa11.63□□□□□ -0.55
USE1-208ENST00000600970 SURF2Q15527 256 aaPredicted RBP11.63□□□□□ -0.55
USE1-208ENST00000600970 MZT2AQ6P582 158 aa11.63□□□□□ -0.55
USE1-208ENST00000600970 IL22RA2Q969J5 263 aa11.63□□□□□ -0.55
USE1-208ENST00000600970 UHRF2Q96PU4 802 aa11.63□□□□□ -0.55
USE1-208ENST00000600970 ATP5IP56385 69 aaPredicted RBP11.62□□□□□ -0.55
USE1-208ENST00000600970 SMCO1Q147U7 214 aa11.62□□□□□ -0.55
USE1-208ENST00000600970 RNF182Q8N6D2 247 aa11.62□□□□□ -0.55
USE1-208ENST00000600970 LINC01587Q99440 93 aa11.62□□□□□ -0.55
USE1-208ENST00000600970 SLC25A39Q9BZJ4 359 aaPredicted RBP11.62□□□□□ -0.55
USE1-208ENST00000600970 TIMM8BQ9Y5J9 83 aaPredicted RBP11.62□□□□□ -0.55
USE1-208ENST00000600970 FAT1Q14517 4588 aa11.61□□□□□ -0.55
USE1-208ENST00000600970 TRAV8-2A0A0B4J237 113 aa11.61□□□□□ -0.55
USE1-208ENST00000600970 BOLA2-SMG1P6H3BVE0 249 aa11.61□□□□□ -0.55
USE1-208ENST00000600970 DLK1P80370 383 aa11.61□□□□□ -0.55
USE1-208ENST00000600970 THAP8Q8NA92 274 aa11.61□□□□□ -0.55
USE1-208ENST00000600970 OR4D5Q8NGN0 318 aa11.61□□□□□ -0.55
USE1-208ENST00000600970 C16orf74Q96GX8 76 aa11.61□□□□□ -0.55
USE1-208ENST00000600970 UPK3BQ9BT76 320 aa11.61□□□□□ -0.55
USE1-208ENST00000600970 FUNDC2Q9BWH2 189 aa11.61□□□□□ -0.55
USE1-208ENST00000600970 SLC45A2Q9UMX9 530 aa11.61□□□□□ -0.55
USE1-208ENST00000600970 A0A1W2PPQ1 181 aa11.6□□□□□ -0.55
USE1-208ENST00000600970 CFDP00746 253 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms