RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 SAV1Q9H4B6 383 aaPredicted RBP10.83□□□□□ -0.68
SHKBP1-226ENST00000600791 DNAH6Q9C0G6 4158 aa10.83□□□□□ -0.68
SHKBP1-226ENST00000600791 WRBO00258 174 aa10.82□□□□□ -0.68
SHKBP1-226ENST00000600791 IGKV3-20P01619 116 aa10.82□□□□□ -0.68
SHKBP1-226ENST00000600791 ID1P41134 155 aa10.82□□□□□ -0.68
SHKBP1-226ENST00000600791 GGNBP1Q5YKI7 109 aa10.82□□□□□ -0.68
SHKBP1-226ENST00000600791 FOXI2Q6ZQN5 318 aa10.82□□□□□ -0.68
SHKBP1-226ENST00000600791 ZNF767PQ75MW2 155 aa10.82□□□□□ -0.68
SHKBP1-226ENST00000600791 COQ8AQ8NI60 647 aa10.82□□□□□ -0.68
SHKBP1-226ENST00000600791 PPP1R14BQ96C90 147 aa10.82□□□□□ -0.68
SHKBP1-226ENST00000600791 IGHV4-4A0A075B6R2 117 aa10.81□□□□□ -0.68
SHKBP1-226ENST00000600791 H3BP45 60 aa10.81□□□□□ -0.68
SHKBP1-226ENST00000600791 RPP30P78346 268 aaKnown RBP10.81□□□□□ -0.68
SHKBP1-226ENST00000600791 C12orf74Q32Q52 190 aa10.81□□□□□ -0.68
SHKBP1-226ENST00000600791 SPANXN2Q5MJ10 180 aa10.81□□□□□ -0.68
SHKBP1-226ENST00000600791 ZNF705AQ6ZN79 300 aaPredicted RBP10.81□□□□□ -0.68
SHKBP1-226ENST00000600791 OR8I2Q8N0Y5 310 aa10.81□□□□□ -0.68
SHKBP1-226ENST00000600791 SRRQ9GZT4 340 aa10.81□□□□□ -0.68
SHKBP1-226ENST00000600791 HECTD4Q9Y4D8 3996 aa10.81□□□□□ -0.68
SHKBP1-226ENST00000600791 ZNF705FA8MVS1 300 aaPredicted RBP10.8□□□□□ -0.68
SHKBP1-226ENST00000600791 ISLRO14498 428 aa10.8□□□□□ -0.68
SHKBP1-226ENST00000600791 CFDP00746 253 aaPredicted RBP10.8□□□□□ -0.68
SHKBP1-226ENST00000600791 ZNF705DP0CH99 300 aaPredicted RBP10.8□□□□□ -0.68
SHKBP1-226ENST00000600791 ZNF705BP0CI00 300 aaPredicted RBP10.8□□□□□ -0.68
SHKBP1-226ENST00000600791 FXYD7P58549 80 aa10.8□□□□□ -0.68
SHKBP1-226ENST00000600791 UBE2MP61081 183 aaKnown RBP10.8□□□□□ -0.68
SHKBP1-226ENST00000600791 SPANXN5Q5MJ07 72 aa10.8□□□□□ -0.68
SHKBP1-226ENST00000600791 ZNF709Q8N972 641 aa10.8□□□□□ -0.68
SHKBP1-226ENST00000600791 CLUHP3Q96NS8 147 aa10.8□□□□□ -0.68
SHKBP1-226ENST00000600791 DEFB131BA0A096LNP1 70 aa10.79□□□□□ -0.68
SHKBP1-226ENST00000600791 C9orf170A2RU37 121 aa10.79□□□□□ -0.68
SHKBP1-226ENST00000600791 F6UB75 175 aa10.79□□□□□ -0.68
SHKBP1-226ENST00000600791 ADAP1O75689 374 aa10.79□□□□□ -0.68
SHKBP1-226ENST00000600791 NDUFB6O95139 128 aa10.79□□□□□ -0.68
SHKBP1-226ENST00000600791 GATA2P23769 480 aaPredicted RBP10.79□□□□□ -0.68
SHKBP1-226ENST00000600791 AKR1C1Q04828 323 aa10.79□□□□□ -0.68
SHKBP1-226ENST00000600791 BAK1Q16611 211 aa10.79□□□□□ -0.68
SHKBP1-226ENST00000600791 ACOT7LQ6ZUV0 252 aa10.79□□□□□ -0.68
SHKBP1-226ENST00000600791 OR4B1Q8NGF8 309 aa10.79□□□□□ -0.68
SHKBP1-226ENST00000600791 NEU1Q99519 415 aa10.79□□□□□ -0.68
SHKBP1-226ENST00000600791 RNF126Q9BV68 326 aa10.79□□□□□ -0.68
SHKBP1-226ENST00000600791 SLC35B3Q9H1N7 401 aa10.79□□□□□ -0.68
SHKBP1-226ENST00000600791 SLC25A32Q9H2D1 315 aa10.79□□□□□ -0.68
SHKBP1-226ENST00000600791 SLC25A22Q9H936 323 aa10.79□□□□□ -0.68
SHKBP1-226ENST00000600791 SLC45A2Q9UMX9 530 aa10.79□□□□□ -0.68
SHKBP1-226ENST00000600791 STRAPQ9Y3F4 350 aaKnown RBP10.79□□□□□ -0.68
SHKBP1-226ENST00000600791 ZNF98A6NK75 572 aa10.78□□□□□ -0.68
SHKBP1-226ENST00000600791 ZNF701M0R085 212 aaPredicted RBP10.78□□□□□ -0.68
SHKBP1-226ENST00000600791 AMBPP02760 352 aa10.78□□□□□ -0.68
SHKBP1-226ENST00000600791 MEOX2P50222 304 aa10.78□□□□□ -0.68
SHKBP1-226ENST00000600791 PAX9P55771 341 aa10.78□□□□□ -0.68
SHKBP1-226ENST00000600791 SAMD13Q5VXD3 122 aa10.78□□□□□ -0.68
SHKBP1-226ENST00000600791 TMEM182Q6ZP80 229 aaPredicted RBP10.78□□□□□ -0.68
SHKBP1-226ENST00000600791 BPIFCQ8NFQ6 507 aa10.78□□□□□ -0.68
SHKBP1-226ENST00000600791 C17orf77Q96MU5 243 aa10.78□□□□□ -0.68
SHKBP1-226ENST00000600791 SCRT1Q9BWW7 348 aa10.78□□□□□ -0.68
SHKBP1-226ENST00000600791 IGHV3OR16-12A0A075B7B8 117 aa10.77□□□□□ -0.69
SHKBP1-226ENST00000600791 NAP1L6A6NFF2 107 aa10.77□□□□□ -0.69
SHKBP1-226ENST00000600791 ORM2P19652 201 aa10.77□□□□□ -0.69
SHKBP1-226ENST00000600791 GALR1P47211 349 aa10.77□□□□□ -0.69
SHKBP1-226ENST00000600791 INPP1P49441 399 aa10.77□□□□□ -0.69
SHKBP1-226ENST00000600791 POLR2GP62487 172 aaKnown RBP eCLIP10.77□□□□□ -0.69
SHKBP1-226ENST00000600791 ID3Q02535 119 aa10.77□□□□□ -0.69
SHKBP1-226ENST00000600791 FAM78BQ5VT40 261 aa10.77□□□□□ -0.69
SHKBP1-226ENST00000600791 SPATA31B1PQ5VZV4 182 aa10.77□□□□□ -0.69
SHKBP1-226ENST00000600791 TRIQKQ629K1 86 aa10.77□□□□□ -0.69
SHKBP1-226ENST00000600791 EBLN2Q6P2I7 272 aa10.77□□□□□ -0.69
SHKBP1-226ENST00000600791 C16orf92Q96LL3 132 aa10.77□□□□□ -0.69
SHKBP1-226ENST00000600791 C20orf173Q96LM9 149 aa10.77□□□□□ -0.69
SHKBP1-226ENST00000600791 RPRMQ9NS64 109 aa10.77□□□□□ -0.69
SHKBP1-226ENST00000600791 FLVCR2Q9UPI3 526 aa10.77□□□□□ -0.69
SHKBP1-226ENST00000600791 A0A0J9YX75 114 aa10.76□□□□□ -0.69
SHKBP1-226ENST00000600791 TMEM189A5PLL7 270 aa10.76□□□□□ -0.69
SHKBP1-226ENST00000600791 SMIM9A6NGZ8 99 aa10.76□□□□□ -0.69
SHKBP1-226ENST00000600791 EMP1P54849 157 aa10.76□□□□□ -0.69
SHKBP1-226ENST00000600791 PSG9Q00887 426 aa10.76□□□□□ -0.69
SHKBP1-226ENST00000600791 OR4D5Q8NGN0 318 aa10.76□□□□□ -0.69
SHKBP1-226ENST00000600791 OR1B1Q8NGR6 318 aa10.76□□□□□ -0.69
SHKBP1-226ENST00000600791 RSG1Q9BU20 258 aa10.76□□□□□ -0.69
SHKBP1-226ENST00000600791 TMEM147Q9BVK8 224 aa10.76□□□□□ -0.69
SHKBP1-226ENST00000600791 RFNGQ9Y644 331 aa10.76□□□□□ -0.69
SHKBP1-226ENST00000600791 DNAH2Q9P225 4427 aa10.75□□□□□ -0.69
SHKBP1-226ENST00000600791 LINC00854A0A1B0GVQ3 168 aa10.75□□□□□ -0.69
SHKBP1-226ENST00000600791 SMCO3A2RU48 225 aa10.75□□□□□ -0.69
SHKBP1-226ENST00000600791 SSSCA1O60232 199 aa10.75□□□□□ -0.69
SHKBP1-226ENST00000600791 OR4E1P0C645 316 aa10.75□□□□□ -0.69
SHKBP1-226ENST00000600791 SPART-AS1P0CW21 52 aa10.75□□□□□ -0.69
SHKBP1-226ENST00000600791 BTCP35070 178 aa10.75□□□□□ -0.69
SHKBP1-226ENST00000600791 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.75□□□□□ -0.69
SHKBP1-226ENST00000600791 TMEM144Q7Z5S9 345 aa10.75□□□□□ -0.69
SHKBP1-226ENST00000600791 SDHCQ99643 169 aaPredicted RBP10.75□□□□□ -0.69
SHKBP1-226ENST00000600791 PSENENQ9NZ42 101 aa10.75□□□□□ -0.69
SHKBP1-226ENST00000600791 DOK5Q9P104 306 aa10.75□□□□□ -0.69
SHKBP1-226ENST00000600791 HERC2O95714 4834 aa10.75□□□□□ -0.69
SHKBP1-226ENST00000600791 PMS2P5A8MQ11 134 aa10.74□□□□□ -0.69
SHKBP1-226ENST00000600791 A8MTW9 85 aa10.74□□□□□ -0.69
SHKBP1-226ENST00000600791 H3BRN7 92 aa10.74□□□□□ -0.69
SHKBP1-226ENST00000600791 CCNKO75909 580 aa10.74□□□□□ -0.69
SHKBP1-226ENST00000600791 IFNA21P01568 189 aa10.74□□□□□ -0.69
SHKBP1-226ENST00000600791 ANXA7P20073 488 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms