RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 LYZP61626 148 aa16.11■□□□□ 0.17
SHKBP1-225ENST00000600733 BATFQ16520 125 aa16.11■□□□□ 0.17
SHKBP1-225ENST00000600733 BORCS7Q96B45 105 aa16.11■□□□□ 0.17
SHKBP1-225ENST00000600733 A0A1B0GXF2 115 aa16.1■□□□□ 0.17
SHKBP1-225ENST00000600733 TCRAP04437 139 aa16.1■□□□□ 0.17
SHKBP1-225ENST00000600733 ATOH7Q8N100 152 aa16.1■□□□□ 0.17
SHKBP1-225ENST00000600733 RPP21Q9H633 154 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-225ENST00000600733 B9A039 149 aa16.1■□□□□ 0.17
SHKBP1-225ENST00000600733 HSBP1O75506 76 aa16.1■□□□□ 0.17
SHKBP1-225ENST00000600733 TOMM40O96008 361 aa16.1■□□□□ 0.17
SHKBP1-225ENST00000600733 LTAP01374 205 aa16.1■□□□□ 0.17
SHKBP1-225ENST00000600733 CA7P43166 264 aa16.1■□□□□ 0.17
SHKBP1-225ENST00000600733 LCN12Q6JVE5 192 aa16.1■□□□□ 0.17
SHKBP1-225ENST00000600733 GTSF1Q8WW33 167 aa16.1■□□□□ 0.17
SHKBP1-225ENST00000600733 SRSF12Q8WXF0 261 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-225ENST00000600733 HIGD1AQ9Y241 93 aa16.1■□□□□ 0.17
SHKBP1-225ENST00000600733 ABCA4P78363 2273 aa16.09■□□□□ 0.17
SHKBP1-225ENST00000600733 TRAV8-1A0A0A6YYK1 113 aa16.09■□□□□ 0.17
SHKBP1-225ENST00000600733 RPLP1P05386 114 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-225ENST00000600733 CD3EP07766 207 aa16.09■□□□□ 0.17
SHKBP1-225ENST00000600733 IGLC1P0CG04 106 aa16.09■□□□□ 0.17
SHKBP1-225ENST00000600733 PLP1P60201 277 aa16.09■□□□□ 0.17
SHKBP1-225ENST00000600733 MRPL52Q86TS9 123 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-225ENST00000600733 RPEQ96AT9 228 aa16.09■□□□□ 0.17
SHKBP1-225ENST00000600733 SMIM12Q96EX1 92 aa16.09■□□□□ 0.17
SHKBP1-225ENST00000600733 FMC1Q96HJ9 113 aa16.09■□□□□ 0.17
SHKBP1-225ENST00000600733 OR2J3O76001 311 aa16.08■□□□□ 0.17
SHKBP1-225ENST00000600733 TOX4O94842 621 aa16.08■□□□□ 0.17
SHKBP1-225ENST00000600733 ZNF25P17030 456 aaPredicted RBP16.08■□□□□ 0.17
SHKBP1-225ENST00000600733 CD24P25063 80 aa16.08■□□□□ 0.17
SHKBP1-225ENST00000600733 KLF5Q13887 457 aaPredicted RBP16.08■□□□□ 0.17
SHKBP1-225ENST00000600733 RNASEKQ6P5S7 137 aaKnown RBP16.08■□□□□ 0.17
SHKBP1-225ENST00000600733 ATP5L2Q7Z4Y8 100 aa16.08■□□□□ 0.17
SHKBP1-225ENST00000600733 LINC01560Q8TB33 94 aa16.08■□□□□ 0.17
SHKBP1-225ENST00000600733 PRSS22Q9GZN4 317 aa16.08■□□□□ 0.17
SHKBP1-225ENST00000600733 PPIAL4CA0A0B4J2A2 164 aa16.08■□□□□ 0.16
SHKBP1-225ENST00000600733 P01737 135 aa16.08■□□□□ 0.16
SHKBP1-225ENST00000600733 PPIAL4GP0DN37 164 aa16.08■□□□□ 0.16
SHKBP1-225ENST00000600733 Q71RC1 249 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-225ENST00000600733 PGLYRP4Q96LB8 373 aa16.07■□□□□ 0.16
SHKBP1-225ENST00000600733 C19orf71A6NCJ1 209 aa16.07■□□□□ 0.16
SHKBP1-225ENST00000600733 M0R2Z0 102 aa16.07■□□□□ 0.16
SHKBP1-225ENST00000600733 RBP4P02753 201 aa16.07■□□□□ 0.16
SHKBP1-225ENST00000600733 HBBP68871 147 aa16.07■□□□□ 0.16
SHKBP1-225ENST00000600733 PLGLAQ15195 96 aa16.07■□□□□ 0.16
SHKBP1-225ENST00000600733 ZNF124Q15973 351 aa16.07■□□□□ 0.16
SHKBP1-225ENST00000600733 MAJINQ3KP22 176 aa16.07■□□□□ 0.16
SHKBP1-225ENST00000600733 EXOC3-AS1Q8N2X6 119 aa16.07■□□□□ 0.16
SHKBP1-225ENST00000600733 SLC25A39Q9BZJ4 359 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-225ENST00000600733 ARHGAP32A7KAX9 2087 aa16.06■□□□□ 0.16
SHKBP1-225ENST00000600733 FAM181BA6NEQ2 426 aa16.06■□□□□ 0.16
SHKBP1-225ENST00000600733 I3L2K1 104 aa16.06■□□□□ 0.16
SHKBP1-225ENST00000600733 ANKHD1Q8IWZ3 2542 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-225ENST00000600733 A8MWL6 223 aa16.06■□□□□ 0.16
SHKBP1-225ENST00000600733 PRB4P10163 310 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-225ENST00000600733 PAX2Q02962 417 aa16.06■□□□□ 0.16
SHKBP1-225ENST00000600733 MMDQ15546 238 aa16.06■□□□□ 0.16
SHKBP1-225ENST00000600733 LDLRAD2Q5SZI1 272 aa16.06■□□□□ 0.16
SHKBP1-225ENST00000600733 EBLN2Q6P2I7 272 aa16.06■□□□□ 0.16
SHKBP1-225ENST00000600733 IGFBPL1Q8WX77 278 aa16.06■□□□□ 0.16
SHKBP1-225ENST00000600733 IGLC2P0DOY2 106 aa16.05■□□□□ 0.16
SHKBP1-225ENST00000600733 IGLC3P0DOY3 106 aa16.05■□□□□ 0.16
SHKBP1-225ENST00000600733 FOXA3P55318 350 aaPredicted RBP16.05■□□□□ 0.16
SHKBP1-225ENST00000600733 CIARTQ8N365 385 aaPredicted RBP16.05■□□□□ 0.16
SHKBP1-225ENST00000600733 MUC15Q8N387 334 aa16.05■□□□□ 0.16
SHKBP1-225ENST00000600733 URB1-AS1Q96HZ7 61 aa16.05■□□□□ 0.16
SHKBP1-225ENST00000600733 RASL11BQ9BPW5 248 aa16.05■□□□□ 0.16
SHKBP1-225ENST00000600733 M0QZ24 198 aa16.05■□□□□ 0.16
SHKBP1-225ENST00000600733 GRNP28799 593 aaKnown RBP16.05■□□□□ 0.16
SHKBP1-225ENST00000600733 IGKV1-17P01599 117 aa16.04■□□□□ 0.16
SHKBP1-225ENST00000600733 Q86TA4 180 aa16.04■□□□□ 0.16
SHKBP1-225ENST00000600733 DAZAP1Q96EP5 407 aaKnown RBP16.04■□□□□ 0.16
SHKBP1-225ENST00000600733 ZNF492Q9P255 531 aa16.04■□□□□ 0.16
SHKBP1-225ENST00000600733 ONECUT1Q9UBC0 465 aa16.04■□□□□ 0.16
SHKBP1-225ENST00000600733 TIMM23O14925 209 aa16.03■□□□□ 0.16
SHKBP1-225ENST00000600733 CNIH1O95406 144 aa16.03■□□□□ 0.16
SHKBP1-225ENST00000600733 RBPJQ06330 500 aa16.03■□□□□ 0.16
SHKBP1-225ENST00000600733 CT83Q5H943 113 aa16.03■□□□□ 0.16
SHKBP1-225ENST00000600733 GOLT1AQ6ZVE7 132 aa16.03■□□□□ 0.16
SHKBP1-225ENST00000600733 KIR3DL3Q8N743 410 aa16.03■□□□□ 0.16
SHKBP1-225ENST00000600733 LPAR2Q9HBW0 351 aa16.03■□□□□ 0.16
SHKBP1-225ENST00000600733 OTORQ9NRC9 128 aa16.03■□□□□ 0.16
SHKBP1-225ENST00000600733 UQCR10Q9UDW1 63 aa16.03■□□□□ 0.16
SHKBP1-225ENST00000600733 SPTA1P02549 2419 aa16.03■□□□□ 0.16
SHKBP1-225ENST00000600733 SH2D7A6NKC9 451 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-225ENST00000600733 LY6LH3BQJ8 138 aa16.03■□□□□ 0.16
SHKBP1-225ENST00000600733 SIAH2O43255 324 aa16.03■□□□□ 0.16
SHKBP1-225ENST00000600733 IGLV2-11P01706 119 aa16.03■□□□□ 0.16
SHKBP1-225ENST00000600733 PMCHL1Q16048 86 aa16.03■□□□□ 0.16
SHKBP1-225ENST00000600733 Q56UQ5 140 aa16.03■□□□□ 0.16
SHKBP1-225ENST00000600733 PRNTQ86SH4 94 aa16.03■□□□□ 0.16
SHKBP1-225ENST00000600733 TMEM208Q9BTX3 173 aa16.03■□□□□ 0.16
SHKBP1-225ENST00000600733 PTPRQQ9UMZ3 2332 aa16.03■□□□□ 0.16
SHKBP1-225ENST00000600733 FAM90A27PA6NNH2 459 aa16.02■□□□□ 0.16
SHKBP1-225ENST00000600733 LY6HO94772 140 aa16.02■□□□□ 0.16
SHKBP1-225ENST00000600733 TFPI2P48307 235 aa16.02■□□□□ 0.16
SHKBP1-225ENST00000600733 Q6ZN92 141 aa16.02■□□□□ 0.16
SHKBP1-225ENST00000600733 TXN2Q99757 166 aa16.02■□□□□ 0.16
SHKBP1-225ENST00000600733 VKORC1Q9BQB6 163 aa16.02■□□□□ 0.16
SHKBP1-225ENST00000600733 COL8A1P27658 744 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms