RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 KLK9Q2XQG4 91 aa10.38□□□□□ -0.75
IRF3-225ENST00000600022 UQCC3Q6UW78 93 aa10.38□□□□□ -0.75
IRF3-225ENST00000600022 SFT2D1Q8WV19 159 aa10.38□□□□□ -0.75
IRF3-225ENST00000600022 MGST2Q99735 147 aa10.38□□□□□ -0.75
IRF3-225ENST00000600022 GGTLC1Q9BX51 225 aa10.38□□□□□ -0.75
IRF3-225ENST00000600022 SLC39A9Q9NUM3 307 aa10.38□□□□□ -0.75
IRF3-225ENST00000600022 KLK9Q9UKQ9 250 aa10.38□□□□□ -0.75
IRF3-225ENST00000600022 RND2P52198 227 aa10.37□□□□□ -0.75
IRF3-225ENST00000600022 MFAP2P55001 183 aa10.37□□□□□ -0.75
IRF3-225ENST00000600022 SYNJ2BPP57105 145 aa10.37□□□□□ -0.75
IRF3-225ENST00000600022 EIF4E3Q8N5X7 224 aaKnown RBP10.37□□□□□ -0.75
IRF3-225ENST00000600022 FAM110AQ9BQ89 295 aa10.37□□□□□ -0.75
IRF3-225ENST00000600022 ELOVL1Q9BW60 279 aa10.37□□□□□ -0.75
IRF3-225ENST00000600022 RPRMQ9NS64 109 aa10.37□□□□□ -0.75
IRF3-225ENST00000600022 DMRT1Q9Y5R6 373 aa10.37□□□□□ -0.75
IRF3-225ENST00000600022 CTXND1A0A1B0GTU2 59 aa10.36□□□□□ -0.75
IRF3-225ENST00000600022 MFSD2BA6NFX1 497 aa10.36□□□□□ -0.75
IRF3-225ENST00000600022 IFNA1P01562 189 aa10.36□□□□□ -0.75
IRF3-225ENST00000600022 CSN3P07498 182 aa10.36□□□□□ -0.75
IRF3-225ENST00000600022 OR10J1P30954 320 aa10.36□□□□□ -0.75
IRF3-225ENST00000600022 NPBWR1P48145 328 aa10.36□□□□□ -0.75
IRF3-225ENST00000600022 FHITP49789 147 aa10.36□□□□□ -0.75
IRF3-225ENST00000600022 FAM122CQ6P4D5 195 aa10.36□□□□□ -0.75
IRF3-225ENST00000600022 C19orf35Q6ZS72 473 aa10.36□□□□□ -0.75
IRF3-225ENST00000600022 CYP2G1PQ6ZSU1 146 aa10.36□□□□□ -0.75
IRF3-225ENST00000600022 STPG3Q8N7X2 389 aa10.36□□□□□ -0.75
IRF3-225ENST00000600022 TMEM116Q8NCL8 245 aa10.36□□□□□ -0.75
IRF3-225ENST00000600022 OR9G4Q8NGQ1 327 aa10.36□□□□□ -0.75
IRF3-225ENST00000600022 NPIPB3Q92617 1050 aa10.36□□□□□ -0.75
IRF3-225ENST00000600022 RNF2Q99496 336 aa10.36□□□□□ -0.75
IRF3-225ENST00000600022 PLA2G2EQ9NZK7 142 aa10.36□□□□□ -0.75
IRF3-225ENST00000600022 RFNGQ9Y644 331 aa10.36□□□□□ -0.75
IRF3-225ENST00000600022 IGLV11-55A0A075B6I3 123 aa10.35□□□□□ -0.75
IRF3-225ENST00000600022 TRAV30A0A087WSZ9 112 aa10.35□□□□□ -0.75
IRF3-225ENST00000600022 TRAV1-1A0A0B4J248 108 aa10.35□□□□□ -0.75
IRF3-225ENST00000600022 MAP1LC3B2A6NCE7 125 aa10.35□□□□□ -0.75
IRF3-225ENST00000600022 CDC34P49427 236 aaPredicted RBP10.35□□□□□ -0.75
IRF3-225ENST00000600022 RHOBP62745 196 aa10.35□□□□□ -0.75
IRF3-225ENST00000600022 PEA15Q15121 130 aa10.35□□□□□ -0.75
IRF3-225ENST00000600022 MIC13Q5XKP0 118 aa10.35□□□□□ -0.75
IRF3-225ENST00000600022 THAP8Q8NA92 274 aa10.35□□□□□ -0.75
IRF3-225ENST00000600022 OR1L4Q8NGR5 311 aa10.35□□□□□ -0.75
IRF3-225ENST00000600022 LYPD6BQ8NI32 183 aa10.35□□□□□ -0.75
IRF3-225ENST00000600022 NARS2Q96I59 477 aaKnown RBP10.35□□□□□ -0.75
IRF3-225ENST00000600022 PFDN5Q99471 154 aa10.35□□□□□ -0.75
IRF3-225ENST00000600022 TRGV9Q99603 122 aa10.35□□□□□ -0.75
IRF3-225ENST00000600022 SPATA25Q9BR10 227 aa10.35□□□□□ -0.75
IRF3-225ENST00000600022 MAP1LC3BQ9GZQ8 125 aa10.35□□□□□ -0.75
IRF3-225ENST00000600022 FNDC4Q9H6D8 234 aaPredicted RBP10.35□□□□□ -0.75
IRF3-225ENST00000600022 TREM1Q9NP99 234 aa10.35□□□□□ -0.75
IRF3-225ENST00000600022 SLC45A2Q9UMX9 530 aa10.35□□□□□ -0.75
IRF3-225ENST00000600022 ALMS1Q8TCU4 4167 aa10.35□□□□□ -0.75
IRF3-225ENST00000600022 KRBOX1C9JBD0 128 aa10.34□□□□□ -0.75
IRF3-225ENST00000600022 BRI3O95415 125 aa10.34□□□□□ -0.75
IRF3-225ENST00000600022 EDN2P20800 178 aa10.34□□□□□ -0.75
IRF3-225ENST00000600022 PPT1P50897 306 aa10.34□□□□□ -0.75
IRF3-225ENST00000600022 MFAP4P55083 255 aa10.34□□□□□ -0.75
IRF3-225ENST00000600022 MLANAQ16655 118 aa10.34□□□□□ -0.75
IRF3-225ENST00000600022 LCN15Q6UWW0 184 aa10.34□□□□□ -0.75
IRF3-225ENST00000600022 LINC00322Q6ZN03 302 aaPredicted RBP10.34□□□□□ -0.75
IRF3-225ENST00000600022 S100A7AQ86SG5 101 aa10.34□□□□□ -0.75
IRF3-225ENST00000600022 BPIFCQ8NFQ6 507 aa10.34□□□□□ -0.75
IRF3-225ENST00000600022 OR4X1Q8NH49 305 aa10.34□□□□□ -0.75
IRF3-225ENST00000600022 MBD3L1Q8WWY6 194 aa10.34□□□□□ -0.75
IRF3-225ENST00000600022 FANCD2OSQ96PS1 177 aa10.34□□□□□ -0.75
IRF3-225ENST00000600022 EIF5A2Q9GZV4 153 aaKnown RBP10.34□□□□□ -0.75
IRF3-225ENST00000600022 SELENOKQ9Y6D0 94 aa10.34□□□□□ -0.75
IRF3-225ENST00000600022 A0A1B0GV50 99 aa10.33□□□□□ -0.76
IRF3-225ENST00000600022 H3BUA1 57 aa10.33□□□□□ -0.76
IRF3-225ENST00000600022 I3L2K1 104 aa10.33□□□□□ -0.76
IRF3-225ENST00000600022 K7EIM0 57 aa10.33□□□□□ -0.76
IRF3-225ENST00000600022 GNG7O60262 68 aa10.33□□□□□ -0.76
IRF3-225ENST00000600022 COX7A2P2O60397 106 aa10.33□□□□□ -0.76
IRF3-225ENST00000600022 IGHV3-48P01763 117 aa10.33□□□□□ -0.76
IRF3-225ENST00000600022 ZP3P21754 424 aa10.33□□□□□ -0.76
IRF3-225ENST00000600022 TAGLN2P37802 199 aaKnown RBP10.33□□□□□ -0.76
IRF3-225ENST00000600022 TAS2R45P59539 299 aa10.33□□□□□ -0.76
IRF3-225ENST00000600022 PRR20EP86478 221 aa10.33□□□□□ -0.76
IRF3-225ENST00000600022 PRR20CP86479 221 aa10.33□□□□□ -0.76
IRF3-225ENST00000600022 PRR20DP86480 221 aa10.33□□□□□ -0.76
IRF3-225ENST00000600022 PRR20BP86481 221 aa10.33□□□□□ -0.76
IRF3-225ENST00000600022 PRR20AP86496 221 aa10.33□□□□□ -0.76
IRF3-225ENST00000600022 RPP25LQ8N5L8 163 aaKnown RBP10.33□□□□□ -0.76
IRF3-225ENST00000600022 KRTAP17-1Q9BYP8 105 aa10.33□□□□□ -0.76
IRF3-225ENST00000600022 WFDC10AQ9H1F0 79 aa10.33□□□□□ -0.76
IRF3-225ENST00000600022 SMDT1Q9H4I9 107 aa10.33□□□□□ -0.76
IRF3-225ENST00000600022 VSIRQ9H7M9 311 aa10.33□□□□□ -0.76
IRF3-225ENST00000600022 TUBA4BQ9H853 241 aa10.33□□□□□ -0.76
IRF3-225ENST00000600022 SLC25A22Q9H936 323 aa10.33□□□□□ -0.76
IRF3-225ENST00000600022 PEF1Q9UBV8 284 aaKnown RBP10.33□□□□□ -0.76
IRF3-225ENST00000600022 FBXL7Q9UJT9 491 aa10.33□□□□□ -0.76
IRF3-225ENST00000600022 FRAS1Q86XX4 4008 aa10.33□□□□□ -0.76
IRF3-225ENST00000600022 TRBV9A0A0B4J1U6 114 aa10.32□□□□□ -0.76
IRF3-225ENST00000600022 IGHV3-21A0A0B4J1V1 117 aa10.32□□□□□ -0.76
IRF3-225ENST00000600022 RBMY1BA6NDE4 496 aaKnown RBP10.32□□□□□ -0.76
IRF3-225ENST00000600022 RBMY1EA6NEQ0 496 aaKnown RBP10.32□□□□□ -0.76
IRF3-225ENST00000600022 CLN5O75503 358 aa10.32□□□□□ -0.76
IRF3-225ENST00000600022 RBMY1DP0C7P1 496 aaKnown RBP10.32□□□□□ -0.76
IRF3-225ENST00000600022 LINC00869P0C866 280 aa10.32□□□□□ -0.76
IRF3-225ENST00000600022 S100A7P31151 101 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms