RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 BCAP31P51572 246 aa13.72□□□□□ -0.21
PNKP-213ENST00000599543 ATP5IP56385 69 aaPredicted RBP13.72□□□□□ -0.21
PNKP-213ENST00000599543 ARL16Q0P5N6 197 aa13.72□□□□□ -0.21
PNKP-213ENST00000599543 IL15RAQ13261 267 aa13.72□□□□□ -0.21
PNKP-213ENST00000599543 OR2F1Q13607 317 aa13.72□□□□□ -0.21
PNKP-213ENST00000599543 LRRC37A5PQ49AS3 106 aa13.72□□□□□ -0.21
PNKP-213ENST00000599543 STHQ8IWL8 128 aa13.72□□□□□ -0.21
PNKP-213ENST00000599543 FAM24BQ8N5W8 94 aa13.72□□□□□ -0.21
PNKP-213ENST00000599543 STXBP6Q8NFX7 210 aa13.72□□□□□ -0.21
PNKP-213ENST00000599543 MFFQ9GZY8 342 aa13.72□□□□□ -0.21
PNKP-213ENST00000599543 C11orf68Q9H3H3 251 aaKnown RBP13.72□□□□□ -0.21
PNKP-213ENST00000599543 MGAT4CQ9UBM8 478 aa13.72□□□□□ -0.21
PNKP-213ENST00000599543 IGKV1OR2-108A0A075B7D4 117 aa13.71□□□□□ -0.21
PNKP-213ENST00000599543 FAM24AA6NFZ4 105 aa13.71□□□□□ -0.21
PNKP-213ENST00000599543 CRYBB3P26998 211 aa13.71□□□□□ -0.21
PNKP-213ENST00000599543 H2BFSP57053 126 aa13.71□□□□□ -0.21
PNKP-213ENST00000599543 TMEM14EPQ6UXP3 125 aa13.71□□□□□ -0.21
PNKP-213ENST00000599543 C11orf45Q8TAV5 145 aa13.71□□□□□ -0.21
PNKP-213ENST00000599543 C11orf1Q9H5F2 150 aa13.71□□□□□ -0.21
PNKP-213ENST00000599543 PSG1P11464 419 aa13.7□□□□□ -0.22
PNKP-213ENST00000599543 P2RY1P47900 373 aa13.7□□□□□ -0.22
PNKP-213ENST00000599543 CAV2P51636 162 aa13.7□□□□□ -0.22
PNKP-213ENST00000599543 NANOS2P60321 138 aaKnown RBP13.7□□□□□ -0.22
PNKP-213ENST00000599543 AKR1C1Q04828 323 aa13.7□□□□□ -0.22
PNKP-213ENST00000599543 Q8WTZ3 238 aa13.7□□□□□ -0.22
PNKP-213ENST00000599543 GRAMD2BQ96HH9 432 aa13.7□□□□□ -0.22
PNKP-213ENST00000599543 TSC22D2O75157 780 aa13.69□□□□□ -0.22
PNKP-213ENST00000599543 CST7O76096 145 aa13.69□□□□□ -0.22
PNKP-213ENST00000599543 TOMM40O96008 361 aa13.69□□□□□ -0.22
PNKP-213ENST00000599543 IL4P05112 153 aa13.69□□□□□ -0.22
PNKP-213ENST00000599543 RD3LP0DJH9 198 aa13.69□□□□□ -0.22
PNKP-213ENST00000599543 EIF2B2P49770 351 aaKnown RBP13.69□□□□□ -0.22
PNKP-213ENST00000599543 TAS2R30P59541 319 aa13.69□□□□□ -0.22
PNKP-213ENST00000599543 YPEL3P61236 119 aaPredicted RBP13.69□□□□□ -0.22
PNKP-213ENST00000599543 USF2Q15853 346 aaPredicted RBP13.69□□□□□ -0.22
PNKP-213ENST00000599543 OR51G1Q8NGK1 321 aa13.69□□□□□ -0.22
PNKP-213ENST00000599543 PBDC1Q9BVG4 233 aa13.69□□□□□ -0.22
PNKP-213ENST00000599543 FBXL17Q9UF56 701 aa13.69□□□□□ -0.22
PNKP-213ENST00000599543 IGSF23A1L1A6 192 aa13.68□□□□□ -0.22
PNKP-213ENST00000599543 K7EQG2 157 aa13.68□□□□□ -0.22
PNKP-213ENST00000599543 GATA2P23769 480 aaPredicted RBP13.68□□□□□ -0.22
PNKP-213ENST00000599543 RGS21Q2M5E4 152 aa13.68□□□□□ -0.22
PNKP-213ENST00000599543 OR5AC2Q9NZP5 309 aa13.68□□□□□ -0.22
PNKP-213ENST00000599543 DEFB4AO15263 64 aa13.67□□□□□ -0.22
PNKP-213ENST00000599543 ZNF688P0C7X2 276 aa13.67□□□□□ -0.22
PNKP-213ENST00000599543 LYZP61626 148 aa13.67□□□□□ -0.22
PNKP-213ENST00000599543 TMEM182Q6ZP80 229 aaPredicted RBP13.67□□□□□ -0.22
PNKP-213ENST00000599543 THAP8Q8NA92 274 aa13.67□□□□□ -0.22
PNKP-213ENST00000599543 OR10P1Q8NGE3 313 aa13.67□□□□□ -0.22
PNKP-213ENST00000599543 HELTA6NFD8 242 aa13.66□□□□□ -0.22
PNKP-213ENST00000599543 H0YIZ8 118 aa13.66□□□□□ -0.22
PNKP-213ENST00000599543 CXCL3P19876 107 aa13.66□□□□□ -0.22
PNKP-213ENST00000599543 PVALBP20472 110 aaPredicted RBP13.66□□□□□ -0.22
PNKP-213ENST00000599543 FCN2Q15485 313 aa13.66□□□□□ -0.22
PNKP-213ENST00000599543 TMEM41BQ5BJD5 291 aa13.66□□□□□ -0.22
PNKP-213ENST00000599543 TRPT1Q86TN4 253 aaKnown RBP13.66□□□□□ -0.22
PNKP-213ENST00000599543 DCANP1Q8TF63 244 aa13.66□□□□□ -0.22
PNKP-213ENST00000599543 NMES1Q9C002 83 aa13.66□□□□□ -0.22
PNKP-213ENST00000599543 DEDDO75618 318 aa13.65□□□□□ -0.22
PNKP-213ENST00000599543 HNRNPCP07910 306 aaKnown RBP eCLIP13.65□□□□□ -0.22
PNKP-213ENST00000599543 SPP1P10451 314 aa13.65□□□□□ -0.22
PNKP-213ENST00000599543 DLK1P80370 383 aa13.65□□□□□ -0.22
PNKP-213ENST00000599543 SLC38A11Q08AI6 406 aa13.65□□□□□ -0.22
PNKP-213ENST00000599543 LGALS9CQ6DKI2 356 aa13.65□□□□□ -0.22
PNKP-213ENST00000599543 MORN3Q6PF18 240 aaPredicted RBP13.65□□□□□ -0.22
PNKP-213ENST00000599543 RPP25LQ8N5L8 163 aaKnown RBP13.65□□□□□ -0.22
PNKP-213ENST00000599543 RNF125Q96EQ8 232 aa13.65□□□□□ -0.22
PNKP-213ENST00000599543 TRGV9Q99603 122 aa13.65□□□□□ -0.22
PNKP-213ENST00000599543 AP2S1P53680 142 aaPredicted RBP13.64□□□□□ -0.23
PNKP-213ENST00000599543 ACTL10Q5JWF8 245 aa13.64□□□□□ -0.23
PNKP-213ENST00000599543 TMEM252Q8N6L7 170 aa13.64□□□□□ -0.23
PNKP-213ENST00000599543 OR11H7Q8NGC8 314 aa13.64□□□□□ -0.23
PNKP-213ENST00000599543 C2CD4CQ8TF44 421 aa13.64□□□□□ -0.23
PNKP-213ENST00000599543 PPP1R1CQ8WVI7 109 aa13.64□□□□□ -0.23
PNKP-213ENST00000599543 MED28Q9H204 178 aa13.64□□□□□ -0.23
PNKP-213ENST00000599543 KNCNA6PVL3 124 aa13.63□□□□□ -0.23
PNKP-213ENST00000599543 OXA1LQ15070 435 aa13.63□□□□□ -0.23
PNKP-213ENST00000599543 TMEM144Q7Z5S9 345 aa13.63□□□□□ -0.23
PNKP-213ENST00000599543 Q8NAQ8 132 aa13.63□□□□□ -0.23
PNKP-213ENST00000599543 GLMPQ8WWB7 406 aa13.63□□□□□ -0.23
PNKP-213ENST00000599543 LYRM2Q9NU23 88 aaPredicted RBP13.63□□□□□ -0.23
PNKP-213ENST00000599543 DOK5Q9P104 306 aa13.63□□□□□ -0.23
PNKP-213ENST00000599543 U3KQE9 123 aa13.63□□□□□ -0.23
PNKP-213ENST00000599543 GIG44P09565 113 aaPredicted RBP13.62□□□□□ -0.23
PNKP-213ENST00000599543 C4BPBP20851 252 aa13.62□□□□□ -0.23
PNKP-213ENST00000599543 PSMG4Q5JS54 123 aa13.62□□□□□ -0.23
PNKP-213ENST00000599543 C16orf54Q6UWD8 224 aa13.62□□□□□ -0.23
PNKP-213ENST00000599543 CYP2G1PQ6ZSU1 146 aa13.62□□□□□ -0.23
PNKP-213ENST00000599543 RNF126Q9BV68 326 aa13.62□□□□□ -0.23
PNKP-213ENST00000599543 IGHV4-28A0A0C4DH34 117 aa13.61□□□□□ -0.23
PNKP-213ENST00000599543 RLN2P04090 185 aa13.61□□□□□ -0.23
PNKP-213ENST00000599543 FABP1P07148 127 aa13.61□□□□□ -0.23
PNKP-213ENST00000599543 MIFP14174 115 aa13.61□□□□□ -0.23
PNKP-213ENST00000599543 ORM2P19652 201 aa13.61□□□□□ -0.23
PNKP-213ENST00000599543 SNRPD3P62318 126 aaKnown RBP13.61□□□□□ -0.23
PNKP-213ENST00000599543 CYCSP99999 105 aaKnown RBP13.61□□□□□ -0.23
PNKP-213ENST00000599543 NHLH2Q02577 135 aa13.61□□□□□ -0.23
PNKP-213ENST00000599543 HRH4Q9H3N8 390 aa13.61□□□□□ -0.23
PNKP-213ENST00000599543 NPVFQ9HCQ7 196 aa13.61□□□□□ -0.23
PNKP-213ENST00000599543 C11orf94C9JXX5 98 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms