RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 FAM90A2PQ658T7 463 aa9.73□□□□□ -0.85
SCN8A-208ENST00000599343 ASCL4Q6XD76 172 aa9.73□□□□□ -0.85
SCN8A-208ENST00000599343 LINC01551Q86U37 167 aa9.73□□□□□ -0.85
SCN8A-208ENST00000599343 TMEM242Q9NWH2 141 aa9.73□□□□□ -0.85
SCN8A-208ENST00000599343 IGKV1-27A0A075B6S5 117 aa9.73□□□□□ -0.85
SCN8A-208ENST00000599343 VWCEQ96DN2 955 aa9.73□□□□□ -0.85
SCN8A-208ENST00000599343 INS-IGF2F8WCM5 200 aa9.72□□□□□ -0.85
SCN8A-208ENST00000599343 INSP01308 110 aa9.72□□□□□ -0.85
SCN8A-208ENST00000599343 METRNQ9UJH8 293 aa9.72□□□□□ -0.85
SCN8A-208ENST00000599343 MPV17L2Q567V2 206 aa9.72□□□□□ -0.85
SCN8A-208ENST00000599343 PLEKHB2Q96CS7 222 aa9.72□□□□□ -0.85
SCN8A-208ENST00000599343 CSTL1Q9H114 145 aa9.72□□□□□ -0.85
SCN8A-208ENST00000599343 MYOFQ9NZM1 2061 aa9.72□□□□□ -0.85
SCN8A-208ENST00000599343 ITGB1BP1O14713 200 aa9.72□□□□□ -0.85
SCN8A-208ENST00000599343 C1orf194Q5T5A4 169 aa9.72□□□□□ -0.85
SCN8A-208ENST00000599343 FCN3O75636 299 aa9.72□□□□□ -0.85
SCN8A-208ENST00000599343 ZNF883P0CG24 379 aa9.72□□□□□ -0.85
SCN8A-208ENST00000599343 C3orf79P0CE67 100 aa9.72□□□□□ -0.85
SCN8A-208ENST00000599343 CRYGSP22914 178 aa9.72□□□□□ -0.85
SCN8A-208ENST00000599343 SUPT4H1P63272 117 aaKnown RBP9.72□□□□□ -0.85
SCN8A-208ENST00000599343 C14orf178Q8N769 122 aaPredicted RBP9.72□□□□□ -0.85
SCN8A-208ENST00000599343 TMEM158Q8WZ71 300 aa9.72□□□□□ -0.85
SCN8A-208ENST00000599343 IGHV1-3A0A0C4DH29 117 aa9.71□□□□□ -0.85
SCN8A-208ENST00000599343 LY6DQ14210 128 aa9.71□□□□□ -0.85
SCN8A-208ENST00000599343 AKAP6Q13023 2319 aa9.71□□□□□ -0.85
SCN8A-208ENST00000599343 DLEU1O43261 78 aa9.71□□□□□ -0.85
SCN8A-208ENST00000599343 RASL10AQ92737 203 aa9.71□□□□□ -0.85
SCN8A-208ENST00000599343 GLRX5Q86SX6 157 aa9.71□□□□□ -0.86
SCN8A-208ENST00000599343 C1orf159Q96HA4 380 aa9.71□□□□□ -0.86
SCN8A-208ENST00000599343 KIR3DS1Q14943 382 aa9.71□□□□□ -0.86
SCN8A-208ENST00000599343 CD177Q8N6Q3 437 aa9.71□□□□□ -0.86
SCN8A-208ENST00000599343 SCN4AP35499 1836 aa9.71□□□□□ -0.86
SCN8A-208ENST00000599343 IGHV1-8P0DP01 117 aa9.7□□□□□ -0.86
SCN8A-208ENST00000599343 ZNF672Q499Z4 452 aaPredicted RBP9.7□□□□□ -0.86
SCN8A-208ENST00000599343 RPP25LQ8N5L8 163 aaKnown RBP9.7□□□□□ -0.86
SCN8A-208ENST00000599343 IGKV1-5P01602 117 aa9.7□□□□□ -0.86
SCN8A-208ENST00000599343 ESDP10768 282 aa9.7□□□□□ -0.86
SCN8A-208ENST00000599343 DLX4Q92988 240 aaPredicted RBP9.7□□□□□ -0.86
SCN8A-208ENST00000599343 IGLV3-12A0A075B6K2 115 aa9.7□□□□□ -0.86
SCN8A-208ENST00000599343 VWC2LB2RUY7 222 aa9.7□□□□□ -0.86
SCN8A-208ENST00000599343 PSPNO60542 156 aa9.7□□□□□ -0.86
SCN8A-208ENST00000599343 RPL36AP83881 106 aaKnown RBP9.7□□□□□ -0.86
SCN8A-208ENST00000599343 GAGE2AQ6NT46 116 aa9.7□□□□□ -0.86
SCN8A-208ENST00000599343 RPL36ALQ969Q0 106 aaKnown RBP9.7□□□□□ -0.86
SCN8A-208ENST00000599343 UBE2E2Q96LR5 201 aa9.7□□□□□ -0.86
SCN8A-208ENST00000599343 A0A087WWL8 130 aa9.7□□□□□ -0.86
SCN8A-208ENST00000599343 TRAV13-1A0A0B4J241 112 aa9.7□□□□□ -0.86
SCN8A-208ENST00000599343 A0A1B0GWJ7 208 aa9.7□□□□□ -0.86
SCN8A-208ENST00000599343 LINC00205P59089 165 aa9.7□□□□□ -0.86
SCN8A-208ENST00000599343 RPRMLQ8N4K4 120 aa9.7□□□□□ -0.86
SCN8A-208ENST00000599343 FLVCR1-AS1Q8TAF5 88 aa9.7□□□□□ -0.86
SCN8A-208ENST00000599343 BRD3OSQ6XYD6 125 aa9.7□□□□□ -0.86
SCN8A-208ENST00000599343 ZNF236Q9UL36 1845 aa9.7□□□□□ -0.86
SCN8A-208ENST00000599343 LOC102723996A0A087X1L8 192 aa9.69□□□□□ -0.86
SCN8A-208ENST00000599343 ERCC8Q13216 396 aa9.69□□□□□ -0.86
SCN8A-208ENST00000599343 ESPL1Q14674 2120 aa9.69□□□□□ -0.86
SCN8A-208ENST00000599343 IGLV3-32A0A0A0MS00 114 aa9.69□□□□□ -0.86
SCN8A-208ENST00000599343 PSG3Q16557 428 aa9.69□□□□□ -0.86
SCN8A-208ENST00000599343 SRSF7Q16629 238 aaKnown RBP eCLIP9.69□□□□□ -0.86
SCN8A-208ENST00000599343 NEUROG3Q9Y4Z2 214 aa9.69□□□□□ -0.86
SCN8A-208ENST00000599343 SYS1-DBNDD2H3BUS1 97 aa9.69□□□□□ -0.86
SCN8A-208ENST00000599343 C6orf226Q5I0X4 101 aa9.69□□□□□ -0.86
SCN8A-208ENST00000599343 TNFRSF14Q92956 283 aa9.69□□□□□ -0.86
SCN8A-208ENST00000599343 SPXQ9BT56 116 aa9.69□□□□□ -0.86
SCN8A-208ENST00000599343 EFNA2O43921 213 aa9.69□□□□□ -0.86
SCN8A-208ENST00000599343 NTF4P34130 210 aa9.69□□□□□ -0.86
SCN8A-208ENST00000599343 C5orf63A6NC05 138 aa9.69□□□□□ -0.86
SCN8A-208ENST00000599343 LHFPL1Q86WI0 220 aa9.69□□□□□ -0.86
SCN8A-208ENST00000599343 NABP1Q96AH0 204 aa9.69□□□□□ -0.86
SCN8A-208ENST00000599343 TRGV9Q99603 122 aa9.69□□□□□ -0.86
SCN8A-208ENST00000599343 COL24A1Q17RW2 1714 aa9.68□□□□□ -0.86
SCN8A-208ENST00000599343 VCYO14598 125 aa9.68□□□□□ -0.86
SCN8A-208ENST00000599343 LEPROTO15243 131 aa9.68□□□□□ -0.86
SCN8A-208ENST00000599343 NDUFS6O75380 124 aaKnown RBP9.68□□□□□ -0.86
SCN8A-208ENST00000599343 ARHGEF17Q96PE2 2063 aaPredicted RBP9.68□□□□□ -0.86
SCN8A-208ENST00000599343 RNF144BQ7Z419 303 aa9.68□□□□□ -0.86
SCN8A-208ENST00000599343 AMN1Q8IY45 258 aa9.68□□□□□ -0.86
SCN8A-208ENST00000599343 RALGAPA1Q6GYQ0 2036 aa9.68□□□□□ -0.86
SCN8A-208ENST00000599343 UBR3Q6ZT12 1888 aa9.68□□□□□ -0.86
SCN8A-208ENST00000599343 SRRM5B3KS81 715 aa9.68□□□□□ -0.86
SCN8A-208ENST00000599343 F8WEM9 126 aa9.68□□□□□ -0.86
SCN8A-208ENST00000599343 RASL11AQ6T310 242 aa9.68□□□□□ -0.86
SCN8A-208ENST00000599343 A0A1B0GW64 132 aa9.68□□□□□ -0.86
SCN8A-208ENST00000599343 LINC01549A6NIU2 74 aa9.68□□□□□ -0.86
SCN8A-208ENST00000599343 IGLV3-19P01714 112 aa9.68□□□□□ -0.86
SCN8A-208ENST00000599343 GAS1P54826 345 aa9.68□□□□□ -0.86
SCN8A-208ENST00000599343 TMEM105Q8N8V8 129 aa9.68□□□□□ -0.86
SCN8A-208ENST00000599343 SSC4DQ8WTU2 575 aa9.68□□□□□ -0.86
SCN8A-208ENST00000599343 REG4Q9BYZ8 158 aa9.68□□□□□ -0.86
SCN8A-208ENST00000599343 ZNF581Q9P0T4 197 aa9.68□□□□□ -0.86
SCN8A-208ENST00000599343 TRAV1-1A0A0B4J248 108 aa9.67□□□□□ -0.86
SCN8A-208ENST00000599343 H0YJW9 148 aa9.67□□□□□ -0.86
SCN8A-208ENST00000599343 GGNQ86UU5 652 aa9.67□□□□□ -0.86
SCN8A-208ENST00000599343 LINC00473A8K010 186 aa9.67□□□□□ -0.86
SCN8A-208ENST00000599343 LILRA1O75019 489 aa9.67□□□□□ -0.86
SCN8A-208ENST00000599343 MST1P26927 711 aa9.67□□□□□ -0.86
SCN8A-208ENST00000599343 NMSQ5H8A3 153 aa9.67□□□□□ -0.86
SCN8A-208ENST00000599343 PYY3Q5JQD4 70 aa9.67□□□□□ -0.86
SCN8A-208ENST00000599343 ZC2HC1BQ5TFG8 222 aa9.67□□□□□ -0.86
SCN8A-208ENST00000599343 ADAMTSL5Q6ZMM2 481 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms