RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 ZNF705EA8MWA4 302 aaPredicted RBP8.81□□□□□ -1
LIG1-217ENST00000599165 H3BMM0 161 aa8.81□□□□□ -1
LIG1-217ENST00000599165 IFNA21P01568 189 aa8.81□□□□□ -1
LIG1-217ENST00000599165 MBPP02686 304 aaPredicted RBP8.81□□□□□ -1
LIG1-217ENST00000599165 RBMY1A1P0DJD3 496 aaKnown RBP8.81□□□□□ -1
LIG1-217ENST00000599165 RBMY1CP0DJD4 496 aa8.81□□□□□ -1
LIG1-217ENST00000599165 SPP1P10451 314 aa8.81□□□□□ -1
LIG1-217ENST00000599165 RBMY1FQ15415 496 aaKnown RBP8.81□□□□□ -1
LIG1-217ENST00000599165 C1orf194Q5T5A4 169 aa8.81□□□□□ -1
LIG1-217ENST00000599165 LINC00299Q6ZSB3 139 aa8.81□□□□□ -1
LIG1-217ENST00000599165 TMEM144Q7Z5S9 345 aa8.81□□□□□ -1
LIG1-217ENST00000599165 SLC25A32Q9H2D1 315 aa8.81□□□□□ -1
LIG1-217ENST00000599165 NUDT15Q9NV35 164 aa8.81□□□□□ -1
LIG1-217ENST00000599165 CLEC5AQ9NY25 188 aa8.81□□□□□ -1
LIG1-217ENST00000599165 KMT2AQ03164 3969 aa8.81□□□□□ -1
LIG1-217ENST00000599165 CXorf65A6NEN9 183 aa8.8□□□□□ -1
LIG1-217ENST00000599165 METTL15P1P0C7V9 234 aa8.8□□□□□ -1
LIG1-217ENST00000599165 HLA-DRB4P13762 266 aa8.8□□□□□ -1
LIG1-217ENST00000599165 RPP30P78346 268 aaKnown RBP8.8□□□□□ -1
LIG1-217ENST00000599165 IFITM3Q01628 133 aa8.8□□□□□ -1
LIG1-217ENST00000599165 IL15RAQ13261 267 aa8.8□□□□□ -1
LIG1-217ENST00000599165 MORN3Q6PF18 240 aaPredicted RBP8.8□□□□□ -1
LIG1-217ENST00000599165 CEMP1Q6PRD7 247 aaPredicted RBP8.8□□□□□ -1
LIG1-217ENST00000599165 C20orf173Q96LM9 149 aa8.8□□□□□ -1
LIG1-217ENST00000599165 HLA-DRB4X5D2U9 266 aa8.8□□□□□ -1
LIG1-217ENST00000599165 IGHV4-28A0A0C4DH34 117 aa8.79□□□□□ -1
LIG1-217ENST00000599165 C7orf66A4D0T2 115 aa8.79□□□□□ -1
LIG1-217ENST00000599165 ZNF98A6NK75 572 aa8.79□□□□□ -1
LIG1-217ENST00000599165 TSC22D2O75157 780 aa8.79□□□□□ -1
LIG1-217ENST00000599165 SCGB1D2O95969 90 aa8.79□□□□□ -1
LIG1-217ENST00000599165 FABP1P07148 127 aa8.79□□□□□ -1
LIG1-217ENST00000599165 NUP62P37198 522 aaPredicted RBP8.79□□□□□ -1
LIG1-217ENST00000599165 NANOS2P60321 138 aaKnown RBP8.79□□□□□ -1
LIG1-217ENST00000599165 RRAS2P62070 204 aaPredicted RBP8.79□□□□□ -1
LIG1-217ENST00000599165 DLK1P80370 383 aa8.79□□□□□ -1
LIG1-217ENST00000599165 AKR1C1Q04828 323 aa8.79□□□□□ -1
LIG1-217ENST00000599165 CYP2G1PQ6ZSU1 146 aa8.79□□□□□ -1
LIG1-217ENST00000599165 ZNF431Q8TF32 576 aaPredicted RBP8.79□□□□□ -1
LIG1-217ENST00000599165 LINC00476Q8WZB0 136 aa8.79□□□□□ -1
LIG1-217ENST00000599165 SCRT1Q9BWW7 348 aa8.79□□□□□ -1
LIG1-217ENST00000599165 GSKIPQ9P0R6 139 aa8.79□□□□□ -1
LIG1-217ENST00000599165 SLC45A2Q9UMX9 530 aa8.79□□□□□ -1
LIG1-217ENST00000599165 ELOA3CA0A087WX78 387 aaPredicted RBP8.78□□□□□ -1
LIG1-217ENST00000599165 NUPR2A6NF83 97 aa8.78□□□□□ -1
LIG1-217ENST00000599165 F6UB75 175 aa8.78□□□□□ -1
LIG1-217ENST00000599165 H3BRN7 92 aa8.78□□□□□ -1
LIG1-217ENST00000599165 K7EPK0 472 aa8.78□□□□□ -1
LIG1-217ENST00000599165 CFDP00746 253 aaPredicted RBP8.78□□□□□ -1
LIG1-217ENST00000599165 PSMB3P49720 205 aa8.78□□□□□ -1
LIG1-217ENST00000599165 TAS2R30P59541 319 aa8.78□□□□□ -1
LIG1-217ENST00000599165 PLP1P60201 277 aa8.78□□□□□ -1
LIG1-217ENST00000599165 SNRPD3P62318 126 aaKnown RBP8.78□□□□□ -1
LIG1-217ENST00000599165 ASAH1Q13510 395 aa8.78□□□□□ -1
LIG1-217ENST00000599165 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.78□□□□□ -1
LIG1-217ENST00000599165 PATE2Q6UY27 113 aa8.78□□□□□ -1
LIG1-217ENST00000599165 OR8I2Q8N0Y5 310 aa8.78□□□□□ -1
LIG1-217ENST00000599165 ZNF709Q8N972 641 aa8.78□□□□□ -1
LIG1-217ENST00000599165 PHLDA1Q8WV24 401 aaPredicted RBP8.78□□□□□ -1
LIG1-217ENST00000599165 SAV1Q9H4B6 383 aaPredicted RBP8.78□□□□□ -1
LIG1-217ENST00000599165 DOK5Q9P104 306 aa8.78□□□□□ -1
LIG1-217ENST00000599165 FBXL17Q9UF56 701 aa8.78□□□□□ -1
LIG1-217ENST00000599165 TRAV8-2A0A0B4J237 113 aa8.77□□□□□ -1.01
LIG1-217ENST00000599165 FNDC10F2Z333 226 aa8.77□□□□□ -1.01
LIG1-217ENST00000599165 JTBO76095 146 aa8.77□□□□□ -1.01
LIG1-217ENST00000599165 H2AFB2P0C5Z0 115 aa8.77□□□□□ -1.01
LIG1-217ENST00000599165 ORM2P19652 201 aa8.77□□□□□ -1.01
LIG1-217ENST00000599165 SLC38A11Q08AI6 406 aa8.77□□□□□ -1.01
LIG1-217ENST00000599165 TMEM41BQ5BJD5 291 aa8.77□□□□□ -1.01
LIG1-217ENST00000599165 TMEM217Q8N7C4 229 aa8.77□□□□□ -1.01
LIG1-217ENST00000599165 BPIFCQ8NFQ6 507 aa8.77□□□□□ -1.01
LIG1-217ENST00000599165 OR1B1Q8NGR6 318 aa8.77□□□□□ -1.01
LIG1-217ENST00000599165 SHANK2-AS3Q9BTD1 123 aa8.77□□□□□ -1.01
LIG1-217ENST00000599165 SLC25A22Q9H936 323 aa8.77□□□□□ -1.01
LIG1-217ENST00000599165 DNAH10Q8IVF4 4471 aa8.77□□□□□ -1.01
LIG1-217ENST00000599165 SMCO3A2RU48 225 aa8.76□□□□□ -1.01
LIG1-217ENST00000599165 A8MTW9 85 aa8.76□□□□□ -1.01
LIG1-217ENST00000599165 ISLRO14498 428 aa8.76□□□□□ -1.01
LIG1-217ENST00000599165 MRPS12O15235 138 aaKnown RBP8.76□□□□□ -1.01
LIG1-217ENST00000599165 LINC00869P0C866 280 aa8.76□□□□□ -1.01
LIG1-217ENST00000599165 FOXI2Q6ZQN5 318 aa8.76□□□□□ -1.01
LIG1-217ENST00000599165 C12orf45Q8N5I9 185 aaPredicted RBP8.76□□□□□ -1.01
LIG1-217ENST00000599165 C11orf45Q8TAV5 145 aa8.76□□□□□ -1.01
LIG1-217ENST00000599165 PPP1R14BQ96C90 147 aa8.76□□□□□ -1.01
LIG1-217ENST00000599165 LINC00052Q96N35 136 aa8.76□□□□□ -1.01
LIG1-217ENST00000599165 CLUHP3Q96NS8 147 aa8.76□□□□□ -1.01
LIG1-217ENST00000599165 UHRF2Q96PU4 802 aa8.76□□□□□ -1.01
LIG1-217ENST00000599165 RSG1Q9BU20 258 aa8.76□□□□□ -1.01
LIG1-217ENST00000599165 SLC25A39Q9BZJ4 359 aaPredicted RBP8.76□□□□□ -1.01
LIG1-217ENST00000599165 XCL2Q9UBD3 114 aa8.76□□□□□ -1.01
LIG1-217ENST00000599165 PFDN2Q9UHV9 154 aa8.76□□□□□ -1.01
LIG1-217ENST00000599165 DNAH6Q9C0G6 4158 aa8.76□□□□□ -1.01
LIG1-217ENST00000599165 A0A0J9YX75 114 aa8.75□□□□□ -1.01
LIG1-217ENST00000599165 DEDDO75618 318 aa8.75□□□□□ -1.01
LIG1-217ENST00000599165 UPK1BO75841 260 aa8.75□□□□□ -1.01
LIG1-217ENST00000599165 IGKV3-20P01619 116 aa8.75□□□□□ -1.01
LIG1-217ENST00000599165 IL5P05113 134 aa8.75□□□□□ -1.01
LIG1-217ENST00000599165 MIFP14174 115 aa8.75□□□□□ -1.01
LIG1-217ENST00000599165 FXYD7P58549 80 aa8.75□□□□□ -1.01
LIG1-217ENST00000599165 IGFL4Q6B9Z1 124 aa8.75□□□□□ -1.01
LIG1-217ENST00000599165 AMTNQ6UX39 209 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms