RNA–Protein interactions for RNA: ENST00000599082.1

SOX2-OT-231, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 839 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-231	ENST00000599082	C9orf16	Q9BUW7	83 aa		1.26	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	DOCK4	Q8N1I0	1966 aa		1.25	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	NDUFB3	O43676	98 aa		1.25	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	SERPINA1	P01009	418 aa		1.25	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	SPRN	Q5BIV9	151 aa		1.25	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	GPER1	Q99527	375 aa		1.25	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	LINC00467	Q9BRT7	94 aa		1.25	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	IMUP	Q9GZP8	106 aa		1.25	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	OPTC	Q9UBM4	332 aa		1.25	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	PEAK1	Q9H792	1746 aa		1.25	□□□□□ -2.21
SOX2-OT-231	ENST00000599082		E9PCH4	1651 aa		1.25	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	ALPK3	Q96L96	1907 aa		1.25	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	TCRBV4S1A1T	A0A5B7	111 aa		1.24	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	HMGB3	O15347	200 aa	Known RBP	1.24	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	CCL25	O15444	150 aa		1.24	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	CCL16	O15467	120 aa		1.24	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	HSD11B1	P28845	292 aa		1.24	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	KRTAP5-10	Q6L8G5	202 aa		1.24	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	S100A7A	Q86SG5	101 aa		1.24	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	BORCS5	Q969J3	196 aa		1.24	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	AMELY	Q99218	206 aa		1.24	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	CNTRL	Q7Z7A1	2325 aa		1.24	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	CHD3	Q12873	2000 aa	Known RBP	1.23	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	TAX1BP3	O14907	124 aa		1.23	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	IFNA7	P01567	189 aa		1.23	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	FAM74A1	Q5RGS3	127 aa		1.23	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	BCL2L15	Q5TBC7	163 aa		1.23	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	ST6GALNAC3	Q8NDV1	305 aa		1.23	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	MYO18A	Q92614	2054 aa	Known RBP	1.23	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	UNC13C	Q8NB66	2214 aa		1.23	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	TRBV6-4	A0A1B0GX49	114 aa		1.22	□□□□□ -2.21
SOX2-OT-231	ENST00000599082		A8MWV9	139 aa		1.22	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	CAPZB	P47756	277 aa		1.22	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	ROMO1	P60602	79 aa		1.22	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	HSPE1	P61604	102 aa	Known RBP	1.22	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	TAF1A	Q15573	450 aa	Predicted RBP	1.22	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	OR10K1	Q8NGX5	313 aa		1.22	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	SLC25A21	Q9BQT8	299 aa	Predicted RBP	1.22	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	ARMC1	Q9NVT9	282 aa		1.22	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	MED12	Q93074	2177 aa		1.22	□□□□□ -2.21
SOX2-OT-231	ENST00000599082	ADGRL3	Q9HAR2	1447 aa		1.22	□□□□□ -2.21
SOX2-OT-231	ENST00000599082		M0R378	163 aa		1.21	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	DNAL4	O96015	105 aa		1.21	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	C1QB	P02746	253 aa		1.21	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	TAS2R7	Q9NYW3	318 aa		1.21	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	CAMSAP1	Q5T5Y3	1602 aa		1.21	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	CST8	O60676	142 aa		1.2	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	CHMP6	Q96FZ7	201 aa		1.2	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	PHB2	Q99623	299 aa		1.2	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	UBR2	Q8IWV8	1755 aa		1.2	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	TNS3	Q68CZ2	1445 aa		1.2	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	ASCC3	Q8N3C0	2202 aa	Known RBP	1.19	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	UBE2B	P63146	152 aa		1.19	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	MRPS25	P82663	173 aa	Known RBP	1.19	□□□□□ -2.22
SOX2-OT-231	ENST00000599082		Q8N6K4	173 aa		1.19	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	NUP98	P52948	1817 aa		1.19	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	ARHGEF11	O15085	1522 aa		1.19	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	COL1A1	P02452	1464 aa	Predicted RBP	1.18	□□□□□ -2.22
SOX2-OT-231	ENST00000599082		B4DSR2	109 aa		1.18	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	TMEM256-PLSCR3	K7ERE1	68 aa		1.18	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	PSG9	Q00887	426 aa		1.18	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	TMED2	Q15363	201 aa		1.18	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	CANT1	Q8WVQ1	401 aa		1.18	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	TP53RK	Q96S44	253 aa		1.18	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	LY96	Q9Y6Y9	160 aa		1.18	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	MIA2	Q96PC5	1412 aa		1.17	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	IGHV1-58	A0A0C4DH39	117 aa		1.17	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	GGCT	O75223	188 aa	Known RBP	1.17	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	C2orf82	Q6UX34	121 aa		1.17	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	LINC00322	Q6ZN03	302 aa	Predicted RBP	1.17	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	ZNF833P	Q6ZTB9	187 aa		1.17	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	ORMDL1	Q9P0S3	153 aa		1.17	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	PCTP	Q9UKL6	214 aa		1.17	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	MYO5A	Q9Y4I1	1855 aa	Known RBP	1.17	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	NCR3	O14931	201 aa		1.16	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	NUPR1	O60356	82 aa		1.16	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	NCALD	P61601	193 aa		1.16	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	MYL5	Q02045	173 aa		1.16	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	C4orf22	Q6V702	233 aa		1.16	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	TEX37	Q96LM6	180 aa		1.16	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	LINC00052	Q96N35	136 aa		1.16	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	TMEM14C	Q9P0S9	112 aa		1.16	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	ARL5A	Q9Y689	179 aa		1.16	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	KDM6A	O15550	1401 aa	Predicted RBP	1.15	□□□□□ -2.22
SOX2-OT-231	ENST00000599082	TRAV10	A0A0B4J240	114 aa		1.15	□□□□□ -2.23
SOX2-OT-231	ENST00000599082		E7EUB6	86 aa		1.15	□□□□□ -2.23
SOX2-OT-231	ENST00000599082	ATP5H	O75947	161 aa		1.15	□□□□□ -2.23
SOX2-OT-231	ENST00000599082	CD2	P06729	351 aa		1.15	□□□□□ -2.23
SOX2-OT-231	ENST00000599082	PRB4	P10163	310 aa	Predicted RBP	1.15	□□□□□ -2.23
SOX2-OT-231	ENST00000599082	DSCR4	P56555	118 aa	Predicted RBP	1.15	□□□□□ -2.23
SOX2-OT-231	ENST00000599082	OR5D14	Q8NGL3	314 aa		1.15	□□□□□ -2.23
SOX2-OT-231	ENST00000599082	NPCDR1	Q9BY65	106 aa		1.15	□□□□□ -2.23
SOX2-OT-231	ENST00000599082	ZFC3H1	O60293	1989 aa	Known RBP	1.14	□□□□□ -2.23
SOX2-OT-231	ENST00000599082	NUP210L	Q5VU65	1888 aa		1.14	□□□□□ -2.23
SOX2-OT-231	ENST00000599082	TLCD2	A6NGC4	264 aa		1.14	□□□□□ -2.23
SOX2-OT-231	ENST00000599082	KLF7	O75840	302 aa	Predicted RBP	1.14	□□□□□ -2.23
SOX2-OT-231	ENST00000599082	HOXA6	P31267	233 aa		1.14	□□□□□ -2.23
SOX2-OT-231	ENST00000599082	DYNLT3	P51808	116 aa		1.14	□□□□□ -2.23
SOX2-OT-231	ENST00000599082	EIF5AL1	Q6IS14	154 aa	Known RBP	1.14	□□□□□ -2.23
SOX2-OT-231	ENST00000599082	EXOC3-AS1	Q8N2X6	119 aa		1.14	□□□□□ -2.23

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms