RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 ARL6Q9H0F7 186 aa10.41□□□□□ -0.74
SHKBP1-218ENST00000598907 FAT2Q9NYQ8 4349 aa10.41□□□□□ -0.74
SHKBP1-218ENST00000598907 UBE2L5PA0A1B0GUS4 154 aa10.4□□□□□ -0.74
SHKBP1-218ENST00000598907 SMCO3A2RU48 225 aa10.4□□□□□ -0.74
SHKBP1-218ENST00000598907 ANKRD34BA5PLL1 514 aa10.4□□□□□ -0.74
SHKBP1-218ENST00000598907 IZUMO1RA6ND01 250 aa10.4□□□□□ -0.74
SHKBP1-218ENST00000598907 BMPR1BO00238 502 aa10.4□□□□□ -0.74
SHKBP1-218ENST00000598907 MPDU1O75352 247 aa10.4□□□□□ -0.74
SHKBP1-218ENST00000598907 HSPB1P04792 205 aaKnown RBP10.4□□□□□ -0.74
SHKBP1-218ENST00000598907 OR10J1P30954 320 aa10.4□□□□□ -0.74
SHKBP1-218ENST00000598907 GPR183P32249 361 aa10.4□□□□□ -0.74
SHKBP1-218ENST00000598907 YPEL3P61236 119 aaPredicted RBP10.4□□□□□ -0.74
SHKBP1-218ENST00000598907 PRR20EP86478 221 aa10.4□□□□□ -0.74
SHKBP1-218ENST00000598907 PRR20CP86479 221 aa10.4□□□□□ -0.74
SHKBP1-218ENST00000598907 PRR20DP86480 221 aa10.4□□□□□ -0.74
SHKBP1-218ENST00000598907 PRR20BP86481 221 aa10.4□□□□□ -0.74
SHKBP1-218ENST00000598907 PRR20AP86496 221 aa10.4□□□□□ -0.74
SHKBP1-218ENST00000598907 ZNF266Q14584 549 aa10.4□□□□□ -0.74
SHKBP1-218ENST00000598907 RPL7L1Q6DKI1 246 aaKnown RBP10.4□□□□□ -0.74
SHKBP1-218ENST00000598907 BTNL8Q6UX41 500 aa10.4□□□□□ -0.74
SHKBP1-218ENST00000598907 DEFB125Q8N687 156 aa10.4□□□□□ -0.74
SHKBP1-218ENST00000598907 UBAC2Q8NBM4 344 aa10.4□□□□□ -0.74
SHKBP1-218ENST00000598907 MGST2Q99735 147 aa10.4□□□□□ -0.74
SHKBP1-218ENST00000598907 ARV1Q9H2C2 271 aa10.4□□□□□ -0.74
SHKBP1-218ENST00000598907 A0A0J9YWU9 116 aa10.39□□□□□ -0.75
SHKBP1-218ENST00000598907 KANTRA0A1W2PQU2 76 aa10.39□□□□□ -0.75
SHKBP1-218ENST00000598907 PPP5D1E7EU14 171 aa10.39□□□□□ -0.75
SHKBP1-218ENST00000598907 HNRNPCP07910 306 aaKnown RBP eCLIP10.39□□□□□ -0.75
SHKBP1-218ENST00000598907 ARL3P36405 182 aa10.39□□□□□ -0.75
SHKBP1-218ENST00000598907 OPCMLQ14982 345 aa10.39□□□□□ -0.75
SHKBP1-218ENST00000598907 TIGITQ495A1 244 aa10.39□□□□□ -0.75
SHKBP1-218ENST00000598907 LCN12Q6JVE5 192 aa10.39□□□□□ -0.75
SHKBP1-218ENST00000598907 SRD5A3Q9H8P0 318 aa10.39□□□□□ -0.75
SHKBP1-218ENST00000598907 SLC45A2Q9UMX9 530 aa10.39□□□□□ -0.75
SHKBP1-218ENST00000598907 DNAH2Q9P225 4427 aa10.39□□□□□ -0.75
SHKBP1-218ENST00000598907 BORCS7-ASMTA0A0B4J1R7 106 aa10.38□□□□□ -0.75
SHKBP1-218ENST00000598907 ZFP92A6NM28 416 aa10.38□□□□□ -0.75
SHKBP1-218ENST00000598907 AGPAT2O15120 278 aa10.38□□□□□ -0.75
SHKBP1-218ENST00000598907 NUPL2O15504 423 aaKnown RBP10.38□□□□□ -0.75
SHKBP1-218ENST00000598907 GGCTO75223 188 aaKnown RBP10.38□□□□□ -0.75
SHKBP1-218ENST00000598907 TOMM40O96008 361 aa10.38□□□□□ -0.75
SHKBP1-218ENST00000598907 IFNA5P01569 189 aa10.38□□□□□ -0.75
SHKBP1-218ENST00000598907 FGF7P21781 194 aa10.38□□□□□ -0.75
SHKBP1-218ENST00000598907 ZNF90Q03938 601 aa10.38□□□□□ -0.75
SHKBP1-218ENST00000598907 TMEM182Q6ZP80 229 aaPredicted RBP10.38□□□□□ -0.75
SHKBP1-218ENST00000598907 GGTLC1Q9BX51 225 aa10.38□□□□□ -0.75
SHKBP1-218ENST00000598907 NPCDR1Q9BY65 106 aa10.38□□□□□ -0.75
SHKBP1-218ENST00000598907 SCGB2A1O75556 95 aa10.37□□□□□ -0.75
SHKBP1-218ENST00000598907 LINC00869P0C866 280 aa10.37□□□□□ -0.75
SHKBP1-218ENST00000598907 RPL29P47914 159 aaKnown RBP10.37□□□□□ -0.75
SHKBP1-218ENST00000598907 CAMLGP49069 296 aa10.37□□□□□ -0.75
SHKBP1-218ENST00000598907 SELENOTP62341 195 aa10.37□□□□□ -0.75
SHKBP1-218ENST00000598907 ZNF600Q6ZNG1 722 aa10.37□□□□□ -0.75
SHKBP1-218ENST00000598907 CYP2G1PQ6ZSU1 146 aa10.37□□□□□ -0.75
SHKBP1-218ENST00000598907 GPHB5Q86YW7 130 aa10.37□□□□□ -0.75
SHKBP1-218ENST00000598907 STOML3Q8TAV4 291 aa10.37□□□□□ -0.75
SHKBP1-218ENST00000598907 SCGB1C1Q8TD33 95 aa10.37□□□□□ -0.75
SHKBP1-218ENST00000598907 GINS3Q9BRX5 216 aa10.37□□□□□ -0.75
SHKBP1-218ENST00000598907 TIMM9Q9Y5J7 89 aa10.37□□□□□ -0.75
SHKBP1-218ENST00000598907 A0A1B0GVY2 172 aa10.36□□□□□ -0.75
SHKBP1-218ENST00000598907 NDUFA4O00483 81 aa10.36□□□□□ -0.75
SHKBP1-218ENST00000598907 OR2C1O95371 312 aa10.36□□□□□ -0.75
SHKBP1-218ENST00000598907 PSG1P11464 419 aa10.36□□□□□ -0.75
SHKBP1-218ENST00000598907 C4BPBP20851 252 aa10.36□□□□□ -0.75
SHKBP1-218ENST00000598907 RELQ04864 619 aaPredicted RBP10.36□□□□□ -0.75
SHKBP1-218ENST00000598907 RAB31Q13636 194 aa10.36□□□□□ -0.75
SHKBP1-218ENST00000598907 SLC51BQ86UW2 128 aa10.36□□□□□ -0.75
SHKBP1-218ENST00000598907 ZFAND3Q9H8U3 227 aa10.36□□□□□ -0.75
SHKBP1-218ENST00000598907 BOLA1Q9Y3E2 137 aa10.36□□□□□ -0.75
SHKBP1-218ENST00000598907 CFDP00746 253 aaPredicted RBP10.35□□□□□ -0.75
SHKBP1-218ENST00000598907 FABP1P07148 127 aa10.35□□□□□ -0.75
SHKBP1-218ENST00000598907 CD7P09564 240 aa10.35□□□□□ -0.75
SHKBP1-218ENST00000598907 RD3LP0DJH9 198 aa10.35□□□□□ -0.75
SHKBP1-218ENST00000598907 ZP3P21754 424 aa10.35□□□□□ -0.75
SHKBP1-218ENST00000598907 GATA2P23769 480 aaPredicted RBP10.35□□□□□ -0.75
SHKBP1-218ENST00000598907 ATP6V0CP27449 155 aa10.35□□□□□ -0.75
SHKBP1-218ENST00000598907 PLP1P60201 277 aa10.35□□□□□ -0.75
SHKBP1-218ENST00000598907 KLF5Q13887 457 aaPredicted RBP10.35□□□□□ -0.75
SHKBP1-218ENST00000598907 TOMM20LQ6UXN7 152 aa10.35□□□□□ -0.75
SHKBP1-218ENST00000598907 HSD17B11Q8NBQ5 300 aa10.35□□□□□ -0.75
SHKBP1-218ENST00000598907 OR9G4Q8NGQ1 327 aa10.35□□□□□ -0.75
SHKBP1-218ENST00000598907 Q8WTZ3 238 aa10.35□□□□□ -0.75
SHKBP1-218ENST00000598907 OVOL2Q9BRP0 275 aa10.35□□□□□ -0.75
SHKBP1-218ENST00000598907 PSMG3Q9BT73 122 aaPredicted RBP10.35□□□□□ -0.75
SHKBP1-218ENST00000598907 RSG1Q9BU20 258 aa10.35□□□□□ -0.75
SHKBP1-218ENST00000598907 ZNF471Q9BX82 626 aaPredicted RBP10.35□□□□□ -0.75
SHKBP1-218ENST00000598907 RFNGQ9Y644 331 aa10.35□□□□□ -0.75
SHKBP1-218ENST00000598907 C17orf112F2Z3M2 114 aa10.34□□□□□ -0.75
SHKBP1-218ENST00000598907 LGALS9O00182 355 aa10.34□□□□□ -0.75
SHKBP1-218ENST00000598907 SPP1P10451 314 aa10.34□□□□□ -0.75
SHKBP1-218ENST00000598907 SYNJ2BPP57105 145 aa10.34□□□□□ -0.75
SHKBP1-218ENST00000598907 EIF5AP63241 154 aaKnown RBP10.34□□□□□ -0.75
SHKBP1-218ENST00000598907 RPEL1Q2QD12 228 aa10.34□□□□□ -0.75
SHKBP1-218ENST00000598907 MIC13Q5XKP0 118 aa10.34□□□□□ -0.75
SHKBP1-218ENST00000598907 IL34Q6ZMJ4 242 aa10.34□□□□□ -0.75
SHKBP1-218ENST00000598907 BAP18Q8IXM2 172 aa10.34□□□□□ -0.75
SHKBP1-218ENST00000598907 STPG3Q8N7X2 389 aa10.34□□□□□ -0.75
SHKBP1-218ENST00000598907 BPIFCQ8NFQ6 507 aa10.34□□□□□ -0.75
SHKBP1-218ENST00000598907 OR51G1Q8NGK1 321 aa10.34□□□□□ -0.75
SHKBP1-218ENST00000598907 OR2G3Q8NGZ4 309 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms