RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 STARD9Q9P2P6 4700 aa12.2□□□□□ -0.46
USHBP1-208ENST00000598309 LCE6AA0A183 80 aa12.19□□□□□ -0.46
USHBP1-208ENST00000598309 SMCO3A2RU48 225 aa12.19□□□□□ -0.46
USHBP1-208ENST00000598309 METTL15P1P0C7V9 234 aa12.19□□□□□ -0.46
USHBP1-208ENST00000598309 ACTL10Q5JWF8 245 aa12.19□□□□□ -0.46
USHBP1-208ENST00000598309 SAMD13Q5VXD3 122 aa12.19□□□□□ -0.46
USHBP1-208ENST00000598309 OR8I2Q8N0Y5 310 aa12.19□□□□□ -0.46
USHBP1-208ENST00000598309 RARRES2Q99969 163 aa12.19□□□□□ -0.46
USHBP1-208ENST00000598309 MGAT4CQ9UBM8 478 aa12.19□□□□□ -0.46
USHBP1-208ENST00000598309 CSMD3Q7Z407 3707 aa12.19□□□□□ -0.46
USHBP1-208ENST00000598309 C7orf66A4D0T2 115 aa12.18□□□□□ -0.46
USHBP1-208ENST00000598309 FAM25EA8MYX2 175 aa12.18□□□□□ -0.46
USHBP1-208ENST00000598309 CCNKO75909 580 aa12.18□□□□□ -0.46
USHBP1-208ENST00000598309 IL5P05113 134 aa12.18□□□□□ -0.46
USHBP1-208ENST00000598309 ID1P41134 155 aa12.18□□□□□ -0.46
USHBP1-208ENST00000598309 PSMB3P49720 205 aa12.18□□□□□ -0.46
USHBP1-208ENST00000598309 SELENOTP62341 195 aa12.18□□□□□ -0.46
USHBP1-208ENST00000598309 TMEM182Q6ZP80 229 aaPredicted RBP12.18□□□□□ -0.46
USHBP1-208ENST00000598309 CYP2G1PQ6ZSU1 146 aa12.18□□□□□ -0.46
USHBP1-208ENST00000598309 OR11H2Q8NH07 326 aa12.18□□□□□ -0.46
USHBP1-208ENST00000598309 ENKURQ8TC29 256 aa12.18□□□□□ -0.46
USHBP1-208ENST00000598309 TMEM147Q9BVK8 224 aa12.18□□□□□ -0.46
USHBP1-208ENST00000598309 GGACTQ9BVM4 153 aa12.18□□□□□ -0.46
USHBP1-208ENST00000598309 C11orf68Q9H3H3 251 aaKnown RBP12.18□□□□□ -0.46
USHBP1-208ENST00000598309 C5orf51A6NDU8 294 aa12.17□□□□□ -0.46
USHBP1-208ENST00000598309 K7EPK0 472 aa12.17□□□□□ -0.46
USHBP1-208ENST00000598309 L7N2F9 121 aa12.17□□□□□ -0.46
USHBP1-208ENST00000598309 SOCS3O14543 225 aa12.17□□□□□ -0.46
USHBP1-208ENST00000598309 GIG44P09565 113 aaPredicted RBP12.17□□□□□ -0.46
USHBP1-208ENST00000598309 GATA2P23769 480 aaPredicted RBP12.17□□□□□ -0.46
USHBP1-208ENST00000598309 GALR1P47211 349 aa12.17□□□□□ -0.46
USHBP1-208ENST00000598309 PLP1P60201 277 aa12.17□□□□□ -0.46
USHBP1-208ENST00000598309 RRAS2P62070 204 aaPredicted RBP12.17□□□□□ -0.46
USHBP1-208ENST00000598309 VAMP2P63027 116 aa12.17□□□□□ -0.46
USHBP1-208ENST00000598309 C2orf50Q96LR7 162 aa12.17□□□□□ -0.46
USHBP1-208ENST00000598309 GPR82Q96P67 336 aa12.17□□□□□ -0.46
USHBP1-208ENST00000598309 NPVFQ9HCQ7 196 aa12.17□□□□□ -0.46
USHBP1-208ENST00000598309 BATF3Q9NR55 127 aa12.17□□□□□ -0.46
USHBP1-208ENST00000598309 DYNC2H1Q8NCM8 4307 aaKnown RBP12.17□□□□□ -0.46
USHBP1-208ENST00000598309 RYR3Q15413 4870 aa12.16□□□□□ -0.46
USHBP1-208ENST00000598309 ZNF98A6NK75 572 aa12.16□□□□□ -0.46
USHBP1-208ENST00000598309 ISLRO14498 428 aa12.16□□□□□ -0.46
USHBP1-208ENST00000598309 ORM2P19652 201 aa12.16□□□□□ -0.46
USHBP1-208ENST00000598309 C4BPBP20851 252 aa12.16□□□□□ -0.46
USHBP1-208ENST00000598309 MEOX2P50222 304 aa12.16□□□□□ -0.46
USHBP1-208ENST00000598309 EWSR1Q01844 656 aaKnown RBP eCLIP12.16□□□□□ -0.46
USHBP1-208ENST00000598309 GSG1LQ6UXU4 331 aa12.16□□□□□ -0.46
USHBP1-208ENST00000598309 OR1B1Q8NGR6 318 aa12.16□□□□□ -0.46
USHBP1-208ENST00000598309 SLC25A32Q9H2D1 315 aa12.16□□□□□ -0.46
USHBP1-208ENST00000598309 H3BMM0 161 aa12.15□□□□□ -0.46
USHBP1-208ENST00000598309 DEDDO75618 318 aa12.15□□□□□ -0.46
USHBP1-208ENST00000598309 LINC00869P0C866 280 aa12.15□□□□□ -0.46
USHBP1-208ENST00000598309 HLA-DRB4P13762 266 aa12.15□□□□□ -0.46
USHBP1-208ENST00000598309 TEPPQ6URK8 271 aa12.15□□□□□ -0.46
USHBP1-208ENST00000598309 C11orf1Q9H5F2 150 aa12.15□□□□□ -0.46
USHBP1-208ENST00000598309 GPN1Q9HCN4 374 aaPredicted RBP12.15□□□□□ -0.46
USHBP1-208ENST00000598309 LSM5Q9Y4Y9 91 aaKnown RBP12.15□□□□□ -0.46
USHBP1-208ENST00000598309 HLA-DRB4X5D2U9 266 aa12.15□□□□□ -0.46
USHBP1-208ENST00000598309 TENM2Q9NT68 2774 aa12.15□□□□□ -0.46
USHBP1-208ENST00000598309 CXorf65A6NEN9 183 aa12.14□□□□□ -0.47
USHBP1-208ENST00000598309 NUPR2A6NF83 97 aa12.14□□□□□ -0.47
USHBP1-208ENST00000598309 H3BRN7 92 aa12.14□□□□□ -0.47
USHBP1-208ENST00000598309 HYPMO75409 117 aa12.14□□□□□ -0.47
USHBP1-208ENST00000598309 PVALBP20472 110 aaPredicted RBP12.14□□□□□ -0.47
USHBP1-208ENST00000598309 RAP2BP61225 183 aa12.14□□□□□ -0.47
USHBP1-208ENST00000598309 NUTF2P61970 127 aaKnown RBP12.14□□□□□ -0.47
USHBP1-208ENST00000598309 IFITM3Q01628 133 aa12.14□□□□□ -0.47
USHBP1-208ENST00000598309 ARL16Q0P5N6 197 aa12.14□□□□□ -0.47
USHBP1-208ENST00000598309 IL15RAQ13261 267 aa12.14□□□□□ -0.47
USHBP1-208ENST00000598309 FOXI2Q6ZQN5 318 aa12.14□□□□□ -0.47
USHBP1-208ENST00000598309 S100A7AQ86SG5 101 aa12.14□□□□□ -0.47
USHBP1-208ENST00000598309 ZNF546Q86UE3 836 aa12.14□□□□□ -0.47
USHBP1-208ENST00000598309 SHANK2-AS3Q9BTD1 123 aa12.14□□□□□ -0.47
USHBP1-208ENST00000598309 C1QTNF4Q9BXJ3 329 aa12.14□□□□□ -0.47
USHBP1-208ENST00000598309 SLC25A39Q9BZJ4 359 aaPredicted RBP12.14□□□□□ -0.47
USHBP1-208ENST00000598309 SLC25A22Q9H936 323 aa12.14□□□□□ -0.47
USHBP1-208ENST00000598309 HIGD1AQ9Y241 93 aa12.14□□□□□ -0.47
USHBP1-208ENST00000598309 ZNF705EA8MWA4 302 aaPredicted RBP12.13□□□□□ -0.47
USHBP1-208ENST00000598309 PRAF2O60831 178 aa12.13□□□□□ -0.47
USHBP1-208ENST00000598309 JTBO76095 146 aa12.13□□□□□ -0.47
USHBP1-208ENST00000598309 CAV2P51636 162 aa12.13□□□□□ -0.47
USHBP1-208ENST00000598309 PXDC1Q5TGL8 231 aa12.13□□□□□ -0.47
USHBP1-208ENST00000598309 SPATA31B1PQ5VZV4 182 aa12.13□□□□□ -0.47
USHBP1-208ENST00000598309 LINC00052Q96N35 136 aa12.13□□□□□ -0.47
USHBP1-208ENST00000598309 CLUHP3Q96NS8 147 aa12.13□□□□□ -0.47
USHBP1-208ENST00000598309 SCRT1Q9BWW7 348 aa12.13□□□□□ -0.47
USHBP1-208ENST00000598309 SAV1Q9H4B6 383 aaPredicted RBP12.13□□□□□ -0.47
USHBP1-208ENST00000598309 DOK5Q9P104 306 aa12.13□□□□□ -0.47
USHBP1-208ENST00000598309 RNF24Q9Y225 148 aa12.13□□□□□ -0.47
USHBP1-208ENST00000598309 AGRNO00468 2067 aa12.13□□□□□ -0.47
USHBP1-208ENST00000598309 RPL7P18124 248 aaKnown RBP12.12□□□□□ -0.47
USHBP1-208ENST00000598309 BCAP31P51572 246 aa12.12□□□□□ -0.47
USHBP1-208ENST00000598309 S100A10P60903 97 aa12.12□□□□□ -0.47
USHBP1-208ENST00000598309 SLC38A11Q08AI6 406 aa12.12□□□□□ -0.47
USHBP1-208ENST00000598309 PMS2P11Q13670 270 aa12.12□□□□□ -0.47
USHBP1-208ENST00000598309 NRARPQ7Z6K4 114 aa12.12□□□□□ -0.47
USHBP1-208ENST00000598309 Q8NAQ8 132 aa12.12□□□□□ -0.47
USHBP1-208ENST00000598309 CSNK1G2-AS1Q8NCQ2 148 aa12.12□□□□□ -0.47
USHBP1-208ENST00000598309 RSG1Q9BU20 258 aa12.12□□□□□ -0.47
USHBP1-208ENST00000598309 MFFQ9GZY8 342 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms