RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 CNN1P51911 297 aaKnown RBP7□□□□□ -1.29
TRIM28-210ENST00000597618 Q6ZRN7 208 aaPredicted RBP7□□□□□ -1.29
TRIM28-210ENST00000597618 GPR141Q7Z602 305 aa7□□□□□ -1.29
TRIM28-210ENST00000597618 BAP18Q8IXM2 172 aa7□□□□□ -1.29
TRIM28-210ENST00000597618 OR8I2Q8N0Y5 310 aa7□□□□□ -1.29
TRIM28-210ENST00000597618 OR11H7Q8NGC8 314 aa7□□□□□ -1.29
TRIM28-210ENST00000597618 OR10J6PQ8NGY7 276 aa7□□□□□ -1.29
TRIM28-210ENST00000597618 RXFP4Q8TDU9 374 aa7□□□□□ -1.29
TRIM28-210ENST00000597618 TMEM170AQ8WVE7 144 aa7□□□□□ -1.29
TRIM28-210ENST00000597618 PPP1R14BQ96C90 147 aa7□□□□□ -1.29
TRIM28-210ENST00000597618 C16orf74Q96GX8 76 aa7□□□□□ -1.29
TRIM28-210ENST00000597618 C20orf173Q96LM9 149 aa7□□□□□ -1.29
TRIM28-210ENST00000597618 C17orf77Q96MU5 243 aa7□□□□□ -1.29
TRIM28-210ENST00000597618 UHRF2Q96PU4 802 aa7□□□□□ -1.29
TRIM28-210ENST00000597618 COPZ2Q9P299 210 aa7□□□□□ -1.29
TRIM28-210ENST00000597618 ZFP92A6NM28 416 aa6.99□□□□□ -1.29
TRIM28-210ENST00000597618 FAM229AH3BQW9 127 aa6.99□□□□□ -1.29
TRIM28-210ENST00000597618 ELK1P19419 428 aa6.99□□□□□ -1.29
TRIM28-210ENST00000597618 AZU1P20160 251 aa6.99□□□□□ -1.29
TRIM28-210ENST00000597618 UCP1P25874 307 aa6.99□□□□□ -1.29
TRIM28-210ENST00000597618 GALR1P47211 349 aa6.99□□□□□ -1.29
TRIM28-210ENST00000597618 TAS2R60P59551 318 aa6.99□□□□□ -1.29
TRIM28-210ENST00000597618 LYZP61626 148 aa6.99□□□□□ -1.29
TRIM28-210ENST00000597618 OR5I1Q13606 314 aa6.99□□□□□ -1.29
TRIM28-210ENST00000597618 KLF9Q13886 244 aaPredicted RBP6.99□□□□□ -1.29
TRIM28-210ENST00000597618 ICAM4Q14773 271 aa6.99□□□□□ -1.29
TRIM28-210ENST00000597618 ESRGQ1W209 222 aa6.99□□□□□ -1.29
TRIM28-210ENST00000597618 SP6Q3SY56 376 aa6.99□□□□□ -1.29
TRIM28-210ENST00000597618 Q6ZSN1 163 aa6.99□□□□□ -1.29
TRIM28-210ENST00000597618 TMEM256Q8N2U0 113 aa6.99□□□□□ -1.29
TRIM28-210ENST00000597618 CCDC71LQ8N9Z2 235 aa6.99□□□□□ -1.29
TRIM28-210ENST00000597618 VCX3BQ9H321 246 aa6.99□□□□□ -1.29
TRIM28-210ENST00000597618 CACFD1Q9UGQ2 172 aa6.99□□□□□ -1.29
TRIM28-210ENST00000597618 TIMM8BQ9Y5J9 83 aaPredicted RBP6.99□□□□□ -1.29
TRIM28-210ENST00000597618 H3BNG1 76 aa6.98□□□□□ -1.29
TRIM28-210ENST00000597618 BOLA2-SMG1P6H3BVE0 249 aa6.98□□□□□ -1.29
TRIM28-210ENST00000597618 ADAP1O75689 374 aa6.98□□□□□ -1.29
TRIM28-210ENST00000597618 FUSP35637 526 aaKnown RBP eCLIP6.98□□□□□ -1.292e-6■■■■□ 19.4
TRIM28-210ENST00000597618 KRTAP10-1P60331 282 aa6.98□□□□□ -1.29
TRIM28-210ENST00000597618 ZNF90Q03938 601 aa6.98□□□□□ -1.29
TRIM28-210ENST00000597618 RNASE12Q5GAN4 147 aaKnown RBP6.98□□□□□ -1.29
TRIM28-210ENST00000597618 NMSQ5H8A3 153 aa6.98□□□□□ -1.29
TRIM28-210ENST00000597618 IZUMO2Q6UXV1 221 aa6.98□□□□□ -1.29
TRIM28-210ENST00000597618 LHFPL1Q86WI0 220 aa6.98□□□□□ -1.29
TRIM28-210ENST00000597618 ARRDC1Q8N5I2 433 aa6.98□□□□□ -1.29
TRIM28-210ENST00000597618 LINC01587Q99440 93 aa6.98□□□□□ -1.29
TRIM28-210ENST00000597618 MDFICQ9P1T7 246 aa6.98□□□□□ -1.29
TRIM28-210ENST00000597618 CACNG5Q9UF02 275 aa6.98□□□□□ -1.29
TRIM28-210ENST00000597618 TRAV12-2A0A075B6T6 113 aa6.97□□□□□ -1.29
TRIM28-210ENST00000597618 A0A0J9YY99 117 aa6.97□□□□□ -1.29
TRIM28-210ENST00000597618 SNRPGP15A8MWD9 76 aa6.97□□□□□ -1.29
TRIM28-210ENST00000597618 GABARAPH6UMI1 98 aa6.97□□□□□ -1.29
TRIM28-210ENST00000597618 ZNF701M0R085 212 aaPredicted RBP6.97□□□□□ -1.29
TRIM28-210ENST00000597618 GABARAPO95166 117 aa6.97□□□□□ -1.29
TRIM28-210ENST00000597618 CDS2O95674 445 aa6.97□□□□□ -1.29
TRIM28-210ENST00000597618 SMR3BP02814 79 aaPredicted RBP6.97□□□□□ -1.29
TRIM28-210ENST00000597618 ZNF182P17025 639 aaPredicted RBP6.97□□□□□ -1.29
TRIM28-210ENST00000597618 RNASE10Q5GAN6 216 aaKnown RBP6.97□□□□□ -1.29
TRIM28-210ENST00000597618 ZNF493Q6ZR52 646 aa6.97□□□□□ -1.29
TRIM28-210ENST00000597618 TMEM144Q7Z5S9 345 aa6.97□□□□□ -1.29
TRIM28-210ENST00000597618 SNX29P2Q8IUI4 249 aa6.97□□□□□ -1.29
TRIM28-210ENST00000597618 ZFAND1Q8TCF1 268 aa6.97□□□□□ -1.29
TRIM28-210ENST00000597618 RBPMSQ93062 196 aaKnown RBP6.97□□□□□ -1.29
TRIM28-210ENST00000597618 TMEM222Q9H0R3 208 aa6.97□□□□□ -1.29
TRIM28-210ENST00000597618 NOP10Q9NPE3 64 aaKnown RBP6.97□□□□□ -1.29
TRIM28-210ENST00000597618 U3KQ87 197 aa6.97□□□□□ -1.29
TRIM28-210ENST00000597618 IGKV1D-37A0A075B6S9 117 aa6.96□□□□□ -1.3
TRIM28-210ENST00000597618 SMIM31A0A1B0GVY4 71 aa6.96□□□□□ -1.3
TRIM28-210ENST00000597618 HTN1P15515 57 aa6.96□□□□□ -1.3
TRIM28-210ENST00000597618 GAMTQ14353 236 aa6.96□□□□□ -1.3
TRIM28-210ENST00000597618 RNASE8Q8TDE3 154 aaKnown RBP6.96□□□□□ -1.3
TRIM28-210ENST00000597618 TMEM263Q8WUH6 116 aaKnown RBP6.96□□□□□ -1.3
TRIM28-210ENST00000597618 SLC35E1Q96K37 410 aa6.96□□□□□ -1.3
TRIM28-210ENST00000597618 RSG1Q9BU20 258 aa6.96□□□□□ -1.3
TRIM28-210ENST00000597618 SLC25A32Q9H2D1 315 aa6.96□□□□□ -1.3
TRIM28-210ENST00000597618 SIVA1O15304 175 aa6.95□□□□□ -1.3
TRIM28-210ENST00000597618 OR5AC1P0C628 307 aa6.95□□□□□ -1.3
TRIM28-210ENST00000597618 TBPP20226 339 aa6.95□□□□□ -1.3
TRIM28-210ENST00000597618 HOXA5P20719 270 aa6.95□□□□□ -1.3
TRIM28-210ENST00000597618 GPX4P36969 197 aaPredicted RBP6.95□□□□□ -1.3
TRIM28-210ENST00000597618 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.95□□□□□ -1.3
TRIM28-210ENST00000597618 NFE4Q86UQ8 179 aa6.95□□□□□ -1.3
TRIM28-210ENST00000597618 LGI3Q8N145 548 aa6.95□□□□□ -1.3
TRIM28-210ENST00000597618 LINC00612Q8N6U2 182 aa6.95□□□□□ -1.3
TRIM28-210ENST00000597618 OR1B1Q8NGR6 318 aa6.95□□□□□ -1.3
TRIM28-210ENST00000597618 OR13C8Q8NGS7 320 aa6.95□□□□□ -1.3
TRIM28-210ENST00000597618 GPR82Q96P67 336 aa6.95□□□□□ -1.3
TRIM28-210ENST00000597618 SLC25A39Q9BZJ4 359 aaPredicted RBP6.95□□□□□ -1.3
TRIM28-210ENST00000597618 SLC25A22Q9H936 323 aa6.95□□□□□ -1.3
TRIM28-210ENST00000597618 PPP1R14DQ9NXH3 145 aa6.95□□□□□ -1.3
TRIM28-210ENST00000597618 RAB26Q9ULW5 256 aa6.95□□□□□ -1.3
TRIM28-210ENST00000597618 SLC45A2Q9UMX9 530 aa6.95□□□□□ -1.3
TRIM28-210ENST00000597618 A0A087WTM6 91 aa6.94□□□□□ -1.3
TRIM28-210ENST00000597618 TNFAIP8O95379 198 aa6.94□□□□□ -1.3
TRIM28-210ENST00000597618 CFDP00746 253 aaPredicted RBP6.94□□□□□ -1.3
TRIM28-210ENST00000597618 APOA1P02647 267 aa6.94□□□□□ -1.3
TRIM28-210ENST00000597618 GCSHP23434 173 aa6.94□□□□□ -1.3
TRIM28-210ENST00000597618 S100A7P31151 101 aa6.94□□□□□ -1.3
TRIM28-210ENST00000597618 RPS19P39019 145 aaKnown RBP6.94□□□□□ -1.3
TRIM28-210ENST00000597618 ATP5IP56385 69 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms