RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 COX7A2P2O60397 106 aa9.23□□□□□ -0.93
SHKBP1-213ENST00000597325 OR2C1O95371 312 aa9.23□□□□□ -0.93
SHKBP1-213ENST00000597325 MBP02144 154 aa9.23□□□□□ -0.93
SHKBP1-213ENST00000597325 SEC11BP0C7V7 166 aa9.23□□□□□ -0.93
SHKBP1-213ENST00000597325 GATA2P23769 480 aaPredicted RBP9.23□□□□□ -0.93
SHKBP1-213ENST00000597325 HOXD3P31249 432 aaPredicted RBP9.23□□□□□ -0.93
SHKBP1-213ENST00000597325 SERF2P84101 59 aa9.23□□□□□ -0.93
SHKBP1-213ENST00000597325 PRR20EP86478 221 aa9.23□□□□□ -0.93
SHKBP1-213ENST00000597325 PRR20CP86479 221 aa9.23□□□□□ -0.93
SHKBP1-213ENST00000597325 PRR20DP86480 221 aa9.23□□□□□ -0.93
SHKBP1-213ENST00000597325 PRR20BP86481 221 aa9.23□□□□□ -0.93
SHKBP1-213ENST00000597325 PRR20AP86496 221 aa9.23□□□□□ -0.93
SHKBP1-213ENST00000597325 ACOT6Q3I5F7 207 aaPredicted RBP9.23□□□□□ -0.93
SHKBP1-213ENST00000597325 FAM106AQ4KMX7 169 aa9.23□□□□□ -0.93
SHKBP1-213ENST00000597325 AKR1C8PQ5T2L2 129 aa9.23□□□□□ -0.93
SHKBP1-213ENST00000597325 PXDC1Q5TGL8 231 aa9.23□□□□□ -0.93
SHKBP1-213ENST00000597325 TMEM182Q6ZP80 229 aaPredicted RBP9.23□□□□□ -0.93
SHKBP1-213ENST00000597325 S100A7AQ86SG5 101 aa9.23□□□□□ -0.93
SHKBP1-213ENST00000597325 OR11H1Q8NG94 326 aa9.23□□□□□ -0.93
SHKBP1-213ENST00000597325 OR1L4Q8NGR5 311 aa9.23□□□□□ -0.93
SHKBP1-213ENST00000597325 TMED6Q8WW62 240 aa9.23□□□□□ -0.93
SHKBP1-213ENST00000597325 RNF125Q96EQ8 232 aa9.23□□□□□ -0.93
SHKBP1-213ENST00000597325 PFDN5Q99471 154 aa9.23□□□□□ -0.93
SHKBP1-213ENST00000597325 PBDC1Q9BVG4 233 aa9.23□□□□□ -0.93
SHKBP1-213ENST00000597325 DOK5Q9P104 306 aa9.23□□□□□ -0.93
SHKBP1-213ENST00000597325 U3KQK5 164 aa9.23□□□□□ -0.93
SHKBP1-213ENST00000597325 ZNF320A2RRD8 509 aa9.22□□□□□ -0.93
SHKBP1-213ENST00000597325 CCL24O00175 119 aa9.22□□□□□ -0.93
SHKBP1-213ENST00000597325 HYPMO75409 117 aa9.22□□□□□ -0.93
SHKBP1-213ENST00000597325 OR5G3P0C626 314 aa9.22□□□□□ -0.93
SHKBP1-213ENST00000597325 ORM2P19652 201 aa9.22□□□□□ -0.93
SHKBP1-213ENST00000597325 S100A7P31151 101 aa9.22□□□□□ -0.93
SHKBP1-213ENST00000597325 OR1B1Q8NGR6 318 aa9.22□□□□□ -0.93
SHKBP1-213ENST00000597325 C20orf24Q9BUV8 137 aa9.22□□□□□ -0.93
SHKBP1-213ENST00000597325 PFDN2Q9UHV9 154 aa9.22□□□□□ -0.93
SHKBP1-213ENST00000597325 ELOA3CA0A087WX78 387 aaPredicted RBP9.21□□□□□ -0.94
SHKBP1-213ENST00000597325 UMAD1C9J7I0 102 aa9.21□□□□□ -0.94
SHKBP1-213ENST00000597325 IFNA7P01567 189 aa9.21□□□□□ -0.94
SHKBP1-213ENST00000597325 PF4P02776 101 aa9.21□□□□□ -0.94
SHKBP1-213ENST00000597325 M6PRP20645 277 aa9.21□□□□□ -0.94
SHKBP1-213ENST00000597325 TMEM41BQ5BJD5 291 aa9.21□□□□□ -0.94
SHKBP1-213ENST00000597325 C10orf113Q5VZT2 155 aa9.21□□□□□ -0.94
SHKBP1-213ENST00000597325 ALKAL2Q6UX46 152 aa9.21□□□□□ -0.94
SHKBP1-213ENST00000597325 TOMM20LQ6UXN7 152 aa9.21□□□□□ -0.94
SHKBP1-213ENST00000597325 GPHB5Q86YW7 130 aa9.21□□□□□ -0.94
SHKBP1-213ENST00000597325 OR4F17Q8NGA8 305 aa9.21□□□□□ -0.94
SHKBP1-213ENST00000597325 TMEM190Q8WZ59 177 aa9.21□□□□□ -0.94
SHKBP1-213ENST00000597325 NARS2Q96I59 477 aaKnown RBP9.21□□□□□ -0.94
SHKBP1-213ENST00000597325 RAX2Q96IS3 184 aa9.21□□□□□ -0.94
SHKBP1-213ENST00000597325 DUX3Q96PT4 197 aa9.21□□□□□ -0.94
SHKBP1-213ENST00000597325 OR4F4Q96R69 305 aa9.21□□□□□ -0.94
SHKBP1-213ENST00000597325 METTL26Q96S19 204 aa9.21□□□□□ -0.94
SHKBP1-213ENST00000597325 ZFAND3Q9H8U3 227 aa9.21□□□□□ -0.94
SHKBP1-213ENST00000597325 RABAC1Q9UI14 185 aa9.21□□□□□ -0.94
SHKBP1-213ENST00000597325 HIGD1AQ9Y241 93 aa9.21□□□□□ -0.94
SHKBP1-213ENST00000597325 UFC1Q9Y3C8 167 aa9.21□□□□□ -0.94
SHKBP1-213ENST00000597325 RFNGQ9Y644 331 aa9.21□□□□□ -0.94
SHKBP1-213ENST00000597325 IGHV3OR16-8A0A075B7F1 116 aa9.2□□□□□ -0.94
SHKBP1-213ENST00000597325 ADARB2-AS1A8MUL3 147 aa9.2□□□□□ -0.94
SHKBP1-213ENST00000597325 SLURP1P55000 103 aa9.2□□□□□ -0.94
SHKBP1-213ENST00000597325 SYNJ2BPP57105 145 aa9.2□□□□□ -0.94
SHKBP1-213ENST00000597325 PLP1P60201 277 aa9.2□□□□□ -0.94
SHKBP1-213ENST00000597325 KRTAP10-11P60412 298 aa9.2□□□□□ -0.94
SHKBP1-213ENST00000597325 RAB2AP61019 212 aa9.2□□□□□ -0.94
SHKBP1-213ENST00000597325 OR10G4Q8NGN3 311 aa9.2□□□□□ -0.94
SHKBP1-213ENST00000597325 OR10G9Q8NGN4 311 aa9.2□□□□□ -0.94
SHKBP1-213ENST00000597325 OR10G7Q8NGN6 311 aa9.2□□□□□ -0.94
SHKBP1-213ENST00000597325 MUC7Q8TAX7 377 aa9.2□□□□□ -0.94
SHKBP1-213ENST00000597325 GATAD1Q8WUU5 269 aa9.2□□□□□ -0.94
SHKBP1-213ENST00000597325 RCC1LQ96I51 464 aaKnown RBP9.2□□□□□ -0.94
SHKBP1-213ENST00000597325 RNF2Q99496 336 aa9.2□□□□□ -0.94
SHKBP1-213ENST00000597325 DNAJC4Q9NNZ3 241 aa9.2□□□□□ -0.94
SHKBP1-213ENST00000597325 A0A1W2PPV4 95 aa9.19□□□□□ -0.94
SHKBP1-213ENST00000597325 LGALS9O00182 355 aa9.19□□□□□ -0.94
SHKBP1-213ENST00000597325 NPPCP23582 126 aa9.19□□□□□ -0.94
SHKBP1-213ENST00000597325 BMI1P35226 326 aa9.19□□□□□ -0.94
SHKBP1-213ENST00000597325 MYCNOSP40205 109 aa9.19□□□□□ -0.94
SHKBP1-213ENST00000597325 RAB5CP51148 216 aa9.19□□□□□ -0.94
SHKBP1-213ENST00000597325 RHOBP62745 196 aa9.19□□□□□ -0.94
SHKBP1-213ENST00000597325 FHL3Q13643 280 aa9.19□□□□□ -0.94
SHKBP1-213ENST00000597325 USF2Q15853 346 aaPredicted RBP9.19□□□□□ -0.94
SHKBP1-213ENST00000597325 GCSAMLQ5JQS6 135 aa9.19□□□□□ -0.94
SHKBP1-213ENST00000597325 FAM74A1Q5RGS3 127 aa9.19□□□□□ -0.94
SHKBP1-213ENST00000597325 FAM122CQ6P4D5 195 aa9.19□□□□□ -0.94
SHKBP1-213ENST00000597325 TEX261Q6UWH6 196 aa9.19□□□□□ -0.94
SHKBP1-213ENST00000597325 UNQ9165/PRO28630Q6UXU0 137 aa9.19□□□□□ -0.94
SHKBP1-213ENST00000597325 DPPA3Q6W0C5 159 aa9.19□□□□□ -0.94
SHKBP1-213ENST00000597325 MRPL32Q9BYC8 188 aaKnown RBP9.19□□□□□ -0.94
SHKBP1-213ENST00000597325 DAZ1Q9NQZ3 744 aaKnown RBP9.19□□□□□ -0.94
SHKBP1-213ENST00000597325 PEMTQ9UBM1 199 aa9.19□□□□□ -0.94
SHKBP1-213ENST00000597325 UBQLN2Q9UHD9 624 aa9.19□□□□□ -0.94
SHKBP1-213ENST00000597325 RNF24Q9Y225 148 aa9.19□□□□□ -0.94
SHKBP1-213ENST00000597325 ZNF207O43670 478 aaKnown RBP9.18□□□□□ -0.94
SHKBP1-213ENST00000597325 NHLRC4P0CG21 123 aaPredicted RBP9.18□□□□□ -0.94
SHKBP1-213ENST00000597325 IGLL1P15814 213 aa9.18□□□□□ -0.94
SHKBP1-213ENST00000597325 CDC34P49427 236 aaPredicted RBP9.18□□□□□ -0.94
SHKBP1-213ENST00000597325 KLF5Q13887 457 aaPredicted RBP9.18□□□□□ -0.94
SHKBP1-213ENST00000597325 FAM78BQ5VT40 261 aa9.18□□□□□ -0.94
SHKBP1-213ENST00000597325 LINC00305Q7Z4B0 112 aa9.18□□□□□ -0.94
SHKBP1-213ENST00000597325 WFDC9Q8NEX5 89 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms