RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 RPL29P47914 159 aaKnown RBP7.91□□□□□ -1.14
LIG1-210ENST00000596332 HBG1P69891 147 aa7.91□□□□□ -1.14
LIG1-210ENST00000596332 HBG2P69892 147 aa7.91□□□□□ -1.14
LIG1-210ENST00000596332 ZFP69Q49AA0 526 aa7.91□□□□□ -1.14
LIG1-210ENST00000596332 MORN5Q5VZ52 161 aa7.91□□□□□ -1.14
LIG1-210ENST00000596332 MIC13Q5XKP0 118 aa7.91□□□□□ -1.14
LIG1-210ENST00000596332 TCTE3Q8IZS6 198 aa7.91□□□□□ -1.14
LIG1-210ENST00000596332 BPIFCQ8NFQ6 507 aa7.91□□□□□ -1.14
LIG1-210ENST00000596332 PRR25Q96S07 402 aa7.91□□□□□ -1.14
LIG1-210ENST00000596332 ATP5SQ99766 215 aa7.91□□□□□ -1.14
LIG1-210ENST00000596332 PARD6GQ9BYG4 376 aaPredicted RBP7.91□□□□□ -1.14
LIG1-210ENST00000596332 SMIM3Q9BZL3 60 aa7.91□□□□□ -1.14
LIG1-210ENST00000596332 FBXL17Q9UF56 701 aa7.91□□□□□ -1.14
LIG1-210ENST00000596332 PRKDCP78527 4128 aaKnown RBP7.9□□□□□ -1.14
LIG1-210ENST00000596332 UBE2L5PA0A1B0GUS4 154 aa7.9□□□□□ -1.14
LIG1-210ENST00000596332 HMSDA8MTL9 139 aa7.9□□□□□ -1.14
LIG1-210ENST00000596332 TSPAN4O14817 238 aa7.9□□□□□ -1.14
LIG1-210ENST00000596332 MRPS12O15235 138 aaKnown RBP7.9□□□□□ -1.14
LIG1-210ENST00000596332 GP9P14770 177 aa7.9□□□□□ -1.14
LIG1-210ENST00000596332 CAMLGP49069 296 aa7.9□□□□□ -1.14
LIG1-210ENST00000596332 LYZP61626 148 aa7.9□□□□□ -1.14
LIG1-210ENST00000596332 SELENOTP62341 195 aa7.9□□□□□ -1.14
LIG1-210ENST00000596332 GCSAMLQ5JQS6 135 aa7.9□□□□□ -1.14
LIG1-210ENST00000596332 GINS3Q9BRX5 216 aa7.9□□□□□ -1.14
LIG1-210ENST00000596332 NPCDR1Q9BY65 106 aa7.9□□□□□ -1.14
LIG1-210ENST00000596332 GPR61Q9BZJ8 451 aa7.9□□□□□ -1.14
LIG1-210ENST00000596332 FXYD6-FXYD2A0A087WZ82 144 aa7.89□□□□□ -1.15
LIG1-210ENST00000596332 TRAV25A0A0B4J276 109 aa7.89□□□□□ -1.15
LIG1-210ENST00000596332 H3BRN7 92 aa7.89□□□□□ -1.15
LIG1-210ENST00000596332 CFDP00746 253 aaPredicted RBP7.89□□□□□ -1.15
LIG1-210ENST00000596332 CD7P09564 240 aa7.89□□□□□ -1.15
LIG1-210ENST00000596332 ORM2P19652 201 aa7.89□□□□□ -1.15
LIG1-210ENST00000596332 FGF7P21781 194 aa7.89□□□□□ -1.15
LIG1-210ENST00000596332 DEFA6Q01524 100 aa7.89□□□□□ -1.15
LIG1-210ENST00000596332 TCF24Q7RTU0 167 aa7.89□□□□□ -1.15
LIG1-210ENST00000596332 FAM24BQ8N5W8 94 aa7.89□□□□□ -1.15
LIG1-210ENST00000596332 DCANP1Q8TF63 244 aa7.89□□□□□ -1.15
LIG1-210ENST00000596332 UHRF2Q96PU4 802 aa7.89□□□□□ -1.15
LIG1-210ENST00000596332 CITED4Q96RK1 184 aa7.89□□□□□ -1.15
LIG1-210ENST00000596332 METTL26Q96S19 204 aa7.89□□□□□ -1.15
LIG1-210ENST00000596332 SHANK2-AS3Q9BTD1 123 aa7.89□□□□□ -1.15
LIG1-210ENST00000596332 RSG1Q9BU20 258 aa7.89□□□□□ -1.15
LIG1-210ENST00000596332 PBDC1Q9BVG4 233 aa7.89□□□□□ -1.15
LIG1-210ENST00000596332 SLC25A39Q9BZJ4 359 aaPredicted RBP7.89□□□□□ -1.15
LIG1-210ENST00000596332 PLA2G2EQ9NZK7 142 aa7.89□□□□□ -1.15
LIG1-210ENST00000596332 RABAC1Q9UI14 185 aa7.89□□□□□ -1.15
LIG1-210ENST00000596332 ZNF98A6NK75 572 aa7.88□□□□□ -1.15
LIG1-210ENST00000596332 ARPC5O15511 151 aa7.88□□□□□ -1.15
LIG1-210ENST00000596332 MPDU1O75352 247 aa7.88□□□□□ -1.15
LIG1-210ENST00000596332 LGALSLQ3ZCW2 172 aaPredicted RBP7.88□□□□□ -1.15
LIG1-210ENST00000596332 LEMD1Q68G75 181 aa7.88□□□□□ -1.15
LIG1-210ENST00000596332 RPL7L1Q6DKI1 246 aaKnown RBP7.88□□□□□ -1.15
LIG1-210ENST00000596332 LAMTOR1Q6IAA8 161 aa7.88□□□□□ -1.15
LIG1-210ENST00000596332 LCN12Q6JVE5 192 aa7.88□□□□□ -1.15
LIG1-210ENST00000596332 KCNRGQ8N5I3 272 aa7.88□□□□□ -1.15
LIG1-210ENST00000596332 SCRT1Q9BWW7 348 aa7.88□□□□□ -1.15
LIG1-210ENST00000596332 ARL6Q9H0F7 186 aa7.88□□□□□ -1.15
LIG1-210ENST00000596332 ARV1Q9H2C2 271 aa7.88□□□□□ -1.15
LIG1-210ENST00000596332 SLC39A9Q9NUM3 307 aa7.88□□□□□ -1.15
LIG1-210ENST00000596332 DOK5Q9P104 306 aa7.88□□□□□ -1.15
LIG1-210ENST00000596332 PXMP4Q9Y6I8 212 aa7.88□□□□□ -1.15
LIG1-210ENST00000596332 SORL1Q92673 2214 aa7.87□□□□□ -1.15
LIG1-210ENST00000596332 TRAV5A0A0B4J249 113 aa7.87□□□□□ -1.15
LIG1-210ENST00000596332 K7EQG2 157 aa7.87□□□□□ -1.15
LIG1-210ENST00000596332 SOCS3O14543 225 aa7.87□□□□□ -1.15
LIG1-210ENST00000596332 HYPMO75409 117 aa7.87□□□□□ -1.15
LIG1-210ENST00000596332 SCGB2A1O75556 95 aa7.87□□□□□ -1.15
LIG1-210ENST00000596332 FABP1P07148 127 aa7.87□□□□□ -1.15
LIG1-210ENST00000596332 ODF3L2Q3SX64 289 aa7.87□□□□□ -1.15
LIG1-210ENST00000596332 C1orf194Q5T5A4 169 aa7.87□□□□□ -1.15
LIG1-210ENST00000596332 LINC00322Q6ZN03 302 aaPredicted RBP7.87□□□□□ -1.15
LIG1-210ENST00000596332 OR1B1Q8NGR6 318 aa7.87□□□□□ -1.15
LIG1-210ENST00000596332 DYNLRB2Q8TF09 96 aa7.87□□□□□ -1.15
LIG1-210ENST00000596332 MFFQ9GZY8 342 aa7.87□□□□□ -1.15
LIG1-210ENST00000596332 WFDC10AQ9H1F0 79 aa7.87□□□□□ -1.15
LIG1-210ENST00000596332 SLC25A32Q9H2D1 315 aa7.87□□□□□ -1.15
LIG1-210ENST00000596332 MS4A6AQ9H2W1 248 aa7.87□□□□□ -1.15
LIG1-210ENST00000596332 SEPSECSQ9HD40 501 aaKnown RBP7.87□□□□□ -1.15
LIG1-210ENST00000596332 DNAJC4Q9NNZ3 241 aa7.87□□□□□ -1.15
LIG1-210ENST00000596332 A0A1W2PS18 150 aa7.86□□□□□ -1.15
LIG1-210ENST00000596332 C1QBP02746 253 aa7.86□□□□□ -1.15
LIG1-210ENST00000596332 AP2S1P53680 142 aaPredicted RBP7.86□□□□□ -1.15
LIG1-210ENST00000596332 B2MP61769 119 aa7.86□□□□□ -1.15
LIG1-210ENST00000596332 ZNF345Q14585 488 aa7.86□□□□□ -1.15
LIG1-210ENST00000596332 PXDC1Q5TGL8 231 aa7.86□□□□□ -1.15
LIG1-210ENST00000596332 SPATA31B1PQ5VZV4 182 aa7.86□□□□□ -1.15
LIG1-210ENST00000596332 GBGT1Q8N5D6 347 aa7.86□□□□□ -1.15
LIG1-210ENST00000596332 INO80EQ8NBZ0 244 aaPredicted RBP7.86□□□□□ -1.15
LIG1-210ENST00000596332 FAM167A-AS1Q96KT0 104 aa7.86□□□□□ -1.15
LIG1-210ENST00000596332 SPAG8Q99932 426 aaPredicted RBP7.86□□□□□ -1.15
LIG1-210ENST00000596332 SH3BGRL3Q9H299 93 aa7.86□□□□□ -1.15
LIG1-210ENST00000596332 HIGD1AQ9Y241 93 aa7.86□□□□□ -1.15
LIG1-210ENST00000596332 IGKV3-7A0A075B6H7 116 aa7.85□□□□□ -1.15
LIG1-210ENST00000596332 A8MZ25 164 aa7.85□□□□□ -1.15
LIG1-210ENST00000596332 OR5G3P0C626 314 aa7.85□□□□□ -1.15
LIG1-210ENST00000596332 ATP6V0CP27449 155 aa7.85□□□□□ -1.15
LIG1-210ENST00000596332 IFITM2Q01629 132 aa7.85□□□□□ -1.15
LIG1-210ENST00000596332 ZNF124Q15973 351 aa7.85□□□□□ -1.15
LIG1-210ENST00000596332 GUCA2BQ16661 112 aa7.85□□□□□ -1.15
LIG1-210ENST00000596332 SIGLEC15Q6ZMC9 328 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms