RNA–Protein interactions for RNA: ENST00000595874.1

SHKBP1-210, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 203 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-210ENST00000595874 GSKIPQ9P0R6 139 aa7.47□□□□□ -1.21
SHKBP1-210ENST00000595874 TBC1D24Q9ULP9 559 aa7.47□□□□□ -1.21
SHKBP1-210ENST00000595874 STRAPQ9Y3F4 350 aaKnown RBP7.47□□□□□ -1.21
SHKBP1-210ENST00000595874 X6R8D5 127 aa7.47□□□□□ -1.21
SHKBP1-210ENST00000595874 TRAV6A0A075B6T7 132 aa7.46□□□□□ -1.22
SHKBP1-210ENST00000595874 SNRPGP15A8MWD9 76 aa7.46□□□□□ -1.22
SHKBP1-210ENST00000595874 H3BMM0 161 aa7.46□□□□□ -1.22
SHKBP1-210ENST00000595874 NDUFB6O95139 128 aa7.46□□□□□ -1.22
SHKBP1-210ENST00000595874 SPP1P10451 314 aa7.46□□□□□ -1.22
SHKBP1-210ENST00000595874 IL7P13232 177 aa7.46□□□□□ -1.22
SHKBP1-210ENST00000595874 HLA-DMBP28068 263 aa7.46□□□□□ -1.22
SHKBP1-210ENST00000595874 AP2S1P53680 142 aaPredicted RBP7.46□□□□□ -1.22
SHKBP1-210ENST00000595874 MORN3Q6PF18 240 aaPredicted RBP7.46□□□□□ -1.22
SHKBP1-210ENST00000595874 LRTM2Q8N967 370 aa7.46□□□□□ -1.22
SHKBP1-210ENST00000595874 RSG1Q9BU20 258 aa7.46□□□□□ -1.22
SHKBP1-210ENST00000595874 SLC35B3Q9H1N7 401 aa7.46□□□□□ -1.22
SHKBP1-210ENST00000595874 C11orf68Q9H3H3 251 aaKnown RBP7.46□□□□□ -1.22
SHKBP1-210ENST00000595874 PLA2G2EQ9NZK7 142 aa7.46□□□□□ -1.22
SHKBP1-210ENST00000595874 TMED3Q9Y3Q3 217 aa7.46□□□□□ -1.22
SHKBP1-210ENST00000595874 FAM25EA8MYX2 175 aa7.45□□□□□ -1.22
SHKBP1-210ENST00000595874 PRSS46E5RG02 174 aa7.45□□□□□ -1.22
SHKBP1-210ENST00000595874 PRM2P04554 102 aa7.45□□□□□ -1.22
SHKBP1-210ENST00000595874 METTL15P1P0C7V9 234 aa7.45□□□□□ -1.22
SHKBP1-210ENST00000595874 RPP30P78346 268 aaKnown RBP7.45□□□□□ -1.22
SHKBP1-210ENST00000595874 PRR20EP86478 221 aa7.45□□□□□ -1.22
SHKBP1-210ENST00000595874 PRR20CP86479 221 aa7.45□□□□□ -1.22
SHKBP1-210ENST00000595874 PRR20DP86480 221 aa7.45□□□□□ -1.22
SHKBP1-210ENST00000595874 PRR20BP86481 221 aa7.45□□□□□ -1.22
SHKBP1-210ENST00000595874 PRR20AP86496 221 aa7.45□□□□□ -1.22
SHKBP1-210ENST00000595874 RNF182Q8N6D2 247 aa7.45□□□□□ -1.22
SHKBP1-210ENST00000595874 C16orf92Q96LL3 132 aa7.45□□□□□ -1.22
SHKBP1-210ENST00000595874 TRGV9Q99603 122 aa7.45□□□□□ -1.22
SHKBP1-210ENST00000595874 SEC22CQ9BRL7 303 aa7.45□□□□□ -1.22
SHKBP1-210ENST00000595874 RCL1Q9Y2P8 373 aaKnown RBP7.45□□□□□ -1.22
SHKBP1-210ENST00000595874 NAP1L6A6NFF2 107 aa7.44□□□□□ -1.22
SHKBP1-210ENST00000595874 CENPXA8MT69 81 aa7.44□□□□□ -1.22
SHKBP1-210ENST00000595874 IFNA21P01568 189 aa7.44□□□□□ -1.22
SHKBP1-210ENST00000595874 FABP1P07148 127 aa7.44□□□□□ -1.22
SHKBP1-210ENST00000595874 OR5G3P0C626 314 aa7.44□□□□□ -1.22
SHKBP1-210ENST00000595874 NKX2-1P43699 371 aaPredicted RBP7.44□□□□□ -1.22
SHKBP1-210ENST00000595874 SLC38A11Q08AI6 406 aa7.44□□□□□ -1.22
SHKBP1-210ENST00000595874 IAH1Q2TAA2 248 aaPredicted RBP7.44□□□□□ -1.22
SHKBP1-210ENST00000595874 CYP2G1PQ6ZSU1 146 aa7.44□□□□□ -1.22
SHKBP1-210ENST00000595874 THAP8Q8NA92 274 aa7.44□□□□□ -1.22
SHKBP1-210ENST00000595874 CSNK1G2-AS1Q8NCQ2 148 aa7.44□□□□□ -1.22
SHKBP1-210ENST00000595874 BPIFCQ8NFQ6 507 aa7.44□□□□□ -1.22
SHKBP1-210ENST00000595874 OR4D5Q8NGN0 318 aa7.44□□□□□ -1.22
SHKBP1-210ENST00000595874 C2CD4CQ8TF44 421 aa7.44□□□□□ -1.22
SHKBP1-210ENST00000595874 UHRF2Q96PU4 802 aa7.44□□□□□ -1.22
SHKBP1-210ENST00000595874 CIB3Q96Q77 187 aaPredicted RBP7.44□□□□□ -1.22
SHKBP1-210ENST00000595874 TMEM147Q9BVK8 224 aa7.44□□□□□ -1.22
SHKBP1-210ENST00000595874 MFFQ9GZY8 342 aa7.44□□□□□ -1.22
SHKBP1-210ENST00000595874 CACFD1Q9UGQ2 172 aa7.44□□□□□ -1.22
SHKBP1-210ENST00000595874 LSM5Q9Y4Y9 91 aaKnown RBP7.44□□□□□ -1.22
SHKBP1-210ENST00000595874 ZNF98A6NK75 572 aa7.43□□□□□ -1.22
SHKBP1-210ENST00000595874 ZNF705EA8MWA4 302 aaPredicted RBP7.43□□□□□ -1.22
SHKBP1-210ENST00000595874 H3BTX0 84 aa7.43□□□□□ -1.22
SHKBP1-210ENST00000595874 SOCS3O14543 225 aa7.43□□□□□ -1.22
SHKBP1-210ENST00000595874 PLA2G10O15496 165 aa7.43□□□□□ -1.22
SHKBP1-210ENST00000595874 IL5P05113 134 aa7.43□□□□□ -1.22
SHKBP1-210ENST00000595874 SLC25A6P12236 298 aa7.43□□□□□ -1.22
SHKBP1-210ENST00000595874 HLA-DRB4P13762 266 aa7.43□□□□□ -1.22
SHKBP1-210ENST00000595874 MIFP14174 115 aa7.43□□□□□ -1.22
SHKBP1-210ENST00000595874 HTN3P15516 51 aa7.43□□□□□ -1.22
SHKBP1-210ENST00000595874 ID1P41134 155 aa7.43□□□□□ -1.22
SHKBP1-210ENST00000595874 PAX9P55771 341 aa7.43□□□□□ -1.22
SHKBP1-210ENST00000595874 FAM78BQ5VT40 261 aa7.43□□□□□ -1.22
SHKBP1-210ENST00000595874 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.43□□□□□ -1.22
SHKBP1-210ENST00000595874 ZBTB8BQ8NAP8 495 aaPredicted RBP7.43□□□□□ -1.22
SHKBP1-210ENST00000595874 C7orf50Q9BRJ6 194 aaKnown RBP7.43□□□□□ -1.22
SHKBP1-210ENST00000595874 C20orf85Q9H1P6 137 aa7.43□□□□□ -1.22
SHKBP1-210ENST00000595874 SAV1Q9H4B6 383 aaPredicted RBP7.43□□□□□ -1.22
SHKBP1-210ENST00000595874 HLA-DRB4X5D2U9 266 aa7.43□□□□□ -1.22
SHKBP1-210ENST00000595874 PMS2P5A8MQ11 134 aa7.42□□□□□ -1.22
SHKBP1-210ENST00000595874 LYRM1O43325 122 aa7.42□□□□□ -1.22
SHKBP1-210ENST00000595874 BCAP31P51572 246 aa7.42□□□□□ -1.22
SHKBP1-210ENST00000595874 ID3Q02535 119 aa7.42□□□□□ -1.22
SHKBP1-210ENST00000595874 ARL16Q0P5N6 197 aa7.42□□□□□ -1.22
SHKBP1-210ENST00000595874 C12orf74Q32Q52 190 aa7.42□□□□□ -1.22
SHKBP1-210ENST00000595874 EBLN2Q6P2I7 272 aa7.42□□□□□ -1.22
SHKBP1-210ENST00000595874 C17orf77Q96MU5 243 aa7.42□□□□□ -1.22
SHKBP1-210ENST00000595874 ARL6Q9H0F7 186 aa7.42□□□□□ -1.22
SHKBP1-210ENST00000595874 PFDN2Q9UHV9 154 aa7.42□□□□□ -1.22
SHKBP1-210ENST00000595874 APLNQ9ULZ1 77 aa7.42□□□□□ -1.22
SHKBP1-210ENST00000595874 IGHV4-4A0A075B6R2 117 aa7.41□□□□□ -1.22
SHKBP1-210ENST00000595874 C5orf51A6NDU8 294 aa7.41□□□□□ -1.22
SHKBP1-210ENST00000595874 L7N2F9 121 aa7.41□□□□□ -1.22
SHKBP1-210ENST00000595874 ZNF701M0R085 212 aaPredicted RBP7.41□□□□□ -1.22
SHKBP1-210ENST00000595874 M0R2Z0 102 aa7.41□□□□□ -1.22
SHKBP1-210ENST00000595874 LINC00869P0C866 280 aa7.41□□□□□ -1.22
SHKBP1-210ENST00000595874 ATF4P18848 351 aaPredicted RBP7.41□□□□□ -1.22
SHKBP1-210ENST00000595874 NUP62P37198 522 aaPredicted RBP7.41□□□□□ -1.22
SHKBP1-210ENST00000595874 GALR1P47211 349 aa7.41□□□□□ -1.22
SHKBP1-210ENST00000595874 PSMB3P49720 205 aa7.41□□□□□ -1.22
SHKBP1-210ENST00000595874 ATP5IP56385 69 aaPredicted RBP7.41□□□□□ -1.22
SHKBP1-210ENST00000595874 NUTF2P61970 127 aaKnown RBP7.41□□□□□ -1.22
SHKBP1-210ENST00000595874 VAMP2P63027 116 aa7.41□□□□□ -1.22
SHKBP1-210ENST00000595874 SPINK13Q1W4C9 94 aa7.41□□□□□ -1.22
SHKBP1-210ENST00000595874 FOXI2Q6ZQN5 318 aa7.41□□□□□ -1.22
SHKBP1-210ENST00000595874 ZNF738Q8NE65 137 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms