RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 OR2C1O95371 312 aa10.07□□□□□ -0.8
SHKBP1-209ENST00000595803 IL4P05112 153 aa10.07□□□□□ -0.8
SHKBP1-209ENST00000595803 S100A7P31151 101 aa10.07□□□□□ -0.8
SHKBP1-209ENST00000595803 CDX1P47902 265 aaPredicted RBP10.07□□□□□ -0.8
SHKBP1-209ENST00000595803 ZNF726P1Q15940 193 aa10.07□□□□□ -0.8
SHKBP1-209ENST00000595803 NDUFA5Q16718 116 aa10.07□□□□□ -0.8
SHKBP1-209ENST00000595803 KHDC1LQ5JSQ8 128 aa10.07□□□□□ -0.8
SHKBP1-209ENST00000595803 SHISA2Q6UWI4 295 aa10.07□□□□□ -0.8
SHKBP1-209ENST00000595803 PATE2Q6UY27 113 aa10.07□□□□□ -0.8
SHKBP1-209ENST00000595803 MYOZ3Q8TDC0 251 aa10.07□□□□□ -0.8
SHKBP1-209ENST00000595803 RNF125Q96EQ8 232 aa10.07□□□□□ -0.8
SHKBP1-209ENST00000595803 MRPL32Q9BYC8 188 aaKnown RBP10.07□□□□□ -0.8
SHKBP1-209ENST00000595803 SLC25A22Q9H936 323 aa10.07□□□□□ -0.8
SHKBP1-209ENST00000595803 TECRQ9NZ01 308 aaKnown RBP10.07□□□□□ -0.8
SHKBP1-209ENST00000595803 FUT9Q9Y231 359 aa10.07□□□□□ -0.8
SHKBP1-209ENST00000595803 HIGD1AQ9Y241 93 aa10.07□□□□□ -0.8
SHKBP1-209ENST00000595803 A0A1B0GUS0 222 aa10.06□□□□□ -0.8
SHKBP1-209ENST00000595803 A0A1B0GV50 99 aa10.06□□□□□ -0.8
SHKBP1-209ENST00000595803 MAP1LC3B2A6NCE7 125 aa10.06□□□□□ -0.8
SHKBP1-209ENST00000595803 HMGB3O15347 200 aaKnown RBP10.06□□□□□ -0.8
SHKBP1-209ENST00000595803 TRBV12-3P01733 135 aa10.06□□□□□ -0.8
SHKBP1-209ENST00000595803 LGALS1P09382 135 aaKnown RBP10.06□□□□□ -0.8
SHKBP1-209ENST00000595803 TAS2R45P59539 299 aa10.06□□□□□ -0.8
SHKBP1-209ENST00000595803 TOMM20LQ6UXN7 152 aa10.06□□□□□ -0.8
SHKBP1-209ENST00000595803 MIR17HGQ75NE6 70 aa10.06□□□□□ -0.8
SHKBP1-209ENST00000595803 LINC00305Q7Z4B0 112 aa10.06□□□□□ -0.8
SHKBP1-209ENST00000595803 ZNF747Q9BV97 191 aa10.06□□□□□ -0.8
SHKBP1-209ENST00000595803 MAP1LC3BQ9GZQ8 125 aa10.06□□□□□ -0.8
SHKBP1-209ENST00000595803 SEPSECSQ9HD40 501 aaKnown RBP10.06□□□□□ -0.8
SHKBP1-209ENST00000595803 MRPL27Q9P0M9 148 aaKnown RBP10.06□□□□□ -0.8
SHKBP1-209ENST00000595803 TRAV1-1A0A0B4J248 108 aa10.05□□□□□ -0.8
SHKBP1-209ENST00000595803 LINC00862A6NCI5 91 aa10.05□□□□□ -0.8
SHKBP1-209ENST00000595803 BMPR1BO00238 502 aa10.05□□□□□ -0.8
SHKBP1-209ENST00000595803 EIF3GO75821 320 aaKnown RBP eCLIP10.05□□□□□ -0.8
SHKBP1-209ENST00000595803 HSPB1P04792 205 aaKnown RBP10.05□□□□□ -0.8
SHKBP1-209ENST00000595803 C8orf88P0DMB2 117 aa10.05□□□□□ -0.8
SHKBP1-209ENST00000595803 FGF8P55075 233 aaPredicted RBP10.05□□□□□ -0.8
SHKBP1-209ENST00000595803 FAM106AQ4KMX7 169 aa10.05□□□□□ -0.8
SHKBP1-209ENST00000595803 TCTEX1D4Q5JR98 221 aa10.05□□□□□ -0.8
SHKBP1-209ENST00000595803 SPATA31B1PQ5VZV4 182 aa10.05□□□□□ -0.8
SHKBP1-209ENST00000595803 SSX7Q7RTT5 188 aa10.05□□□□□ -0.8
SHKBP1-209ENST00000595803 WIPF2Q8TF74 440 aaPredicted RBP10.05□□□□□ -0.8
SHKBP1-209ENST00000595803 WFDC12Q8WWY7 111 aa10.05□□□□□ -0.8
SHKBP1-209ENST00000595803 RABAC1Q9UI14 185 aa10.05□□□□□ -0.8
SHKBP1-209ENST00000595803 CMYA5Q8N3K9 4069 aa10.04□□□□□ -0.8
SHKBP1-209ENST00000595803 NUDT19A8MXV4 375 aa10.04□□□□□ -0.8
SHKBP1-209ENST00000595803 NDUFA4O00483 81 aa10.04□□□□□ -0.8
SHKBP1-209ENST00000595803 CXorf1O96002 111 aa10.04□□□□□ -0.8
SHKBP1-209ENST00000595803 STAG3L2P0CL84 134 aa10.04□□□□□ -0.8
SHKBP1-209ENST00000595803 STAG3L3P0CL85 134 aa10.04□□□□□ -0.8
SHKBP1-209ENST00000595803 CD28P10747 220 aa10.04□□□□□ -0.8
SHKBP1-209ENST00000595803 PROK1P58294 105 aa10.04□□□□□ -0.8
SHKBP1-209ENST00000595803 FOXL1Q12952 345 aa10.04□□□□□ -0.8
SHKBP1-209ENST00000595803 IQCF2Q8IXL9 164 aa10.04□□□□□ -0.8
SHKBP1-209ENST00000595803 C11orf44Q8N8P7 122 aa10.04□□□□□ -0.8
SHKBP1-209ENST00000595803 LYPD6BQ8NI32 183 aa10.04□□□□□ -0.8
SHKBP1-209ENST00000595803 DPF1Q92782 380 aa10.04□□□□□ -0.8
SHKBP1-209ENST00000595803 MARC2Q969Z3 335 aa10.04□□□□□ -0.8
SHKBP1-209ENST00000595803 UHRF2Q96PU4 802 aa10.04□□□□□ -0.8
SHKBP1-209ENST00000595803 C20orf24Q9BUV8 137 aa10.04□□□□□ -0.8
SHKBP1-209ENST00000595803 RNF24Q9Y225 148 aa10.04□□□□□ -0.8
SHKBP1-209ENST00000595803 TRAV5A0A0B4J249 113 aa10.03□□□□□ -0.8
SHKBP1-209ENST00000595803 ZNF320A2RRD8 509 aa10.03□□□□□ -0.8
SHKBP1-209ENST00000595803 NPPCP23582 126 aa10.03□□□□□ -0.8
SHKBP1-209ENST00000595803 CCL20P78556 96 aa10.03□□□□□ -0.8
SHKBP1-209ENST00000595803 USF2Q15853 346 aaPredicted RBP10.03□□□□□ -0.8
SHKBP1-209ENST00000595803 RPEL1Q2QD12 228 aa10.03□□□□□ -0.8
SHKBP1-209ENST00000595803 KHDC3LQ587J8 217 aa10.03□□□□□ -0.8
SHKBP1-209ENST00000595803 IL34Q6ZMJ4 242 aa10.03□□□□□ -0.8
SHKBP1-209ENST00000595803 COMMD7Q86VX2 200 aa10.03□□□□□ -0.8
SHKBP1-209ENST00000595803 GPHB5Q86YW7 130 aa10.03□□□□□ -0.8
SHKBP1-209ENST00000595803 KLHL30-AS1Q8NEE0 82 aa10.03□□□□□ -0.8
SHKBP1-209ENST00000595803 OR1N2Q8NGR9 330 aa10.03□□□□□ -0.8
SHKBP1-209ENST00000595803 C4orf3Q8WVX3 66 aa10.03□□□□□ -0.8
SHKBP1-209ENST00000595803 SLC25A39Q9BZJ4 359 aaPredicted RBP10.03□□□□□ -0.8
SHKBP1-209ENST00000595803 MED9Q9NWA0 146 aa10.03□□□□□ -0.8
SHKBP1-209ENST00000595803 TSSC4Q9Y5U2 329 aaPredicted RBP10.03□□□□□ -0.8
SHKBP1-209ENST00000595803 IGHV3OR16-8A0A075B7F1 116 aa10.02□□□□□ -0.81
SHKBP1-209ENST00000595803 I3L521 148 aa10.02□□□□□ -0.81
SHKBP1-209ENST00000595803 ZP3P21754 424 aa10.02□□□□□ -0.81
SHKBP1-209ENST00000595803 PQLC2Q6ZP29 291 aa10.02□□□□□ -0.81
SHKBP1-209ENST00000595803 C18orf65Q6ZTR6 163 aa10.02□□□□□ -0.81
SHKBP1-209ENST00000595803 SLC7A5P1Q8MH63 180 aa10.02□□□□□ -0.81
SHKBP1-209ENST00000595803 STXBP6Q8NFX7 210 aa10.02□□□□□ -0.81
SHKBP1-209ENST00000595803 NARS2Q96I59 477 aaKnown RBP10.02□□□□□ -0.81
SHKBP1-209ENST00000595803 METTL26Q96S19 204 aa10.02□□□□□ -0.81
SHKBP1-209ENST00000595803 CITED2Q99967 270 aaPredicted RBP10.02□□□□□ -0.81
SHKBP1-209ENST00000595803 SHANK2-AS3Q9BTD1 123 aa10.02□□□□□ -0.81
SHKBP1-209ENST00000595803 OR51M1Q9H341 326 aa10.02□□□□□ -0.81
SHKBP1-209ENST00000595803 ZFAND3Q9H8U3 227 aa10.02□□□□□ -0.81
SHKBP1-209ENST00000595803 IGHV4OR15-8A0A075B7B6 117 aa10.01□□□□□ -0.81
SHKBP1-209ENST00000595803 A0A087WW49 117 aa10.01□□□□□ -0.81
SHKBP1-209ENST00000595803 A0A1W2PRX2 142 aa10.01□□□□□ -0.81
SHKBP1-209ENST00000595803 ZNF98A6NK75 572 aa10.01□□□□□ -0.81
SHKBP1-209ENST00000595803 LINC01619G3V211 115 aa10.01□□□□□ -0.81
SHKBP1-209ENST00000595803 H3BRN7 92 aa10.01□□□□□ -0.81
SHKBP1-209ENST00000595803 OR7C2O60412 319 aa10.01□□□□□ -0.81
SHKBP1-209ENST00000595803 IFNA1P01562 189 aa10.01□□□□□ -0.81
SHKBP1-209ENST00000595803 ARL14EPLP0DKL9 152 aa10.01□□□□□ -0.81
SHKBP1-209ENST00000595803 GCHFRP30047 84 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms