RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 TEPPQ6URK8 271 aa10.24□□□□□ -0.77
SHKBP1-207ENST00000595631 SIGLEC15Q6ZMC9 328 aa10.24□□□□□ -0.77
SHKBP1-207ENST00000595631 LINC00322Q6ZN03 302 aaPredicted RBP10.24□□□□□ -0.77
SHKBP1-207ENST00000595631 STX12Q86Y82 276 aa10.24□□□□□ -0.77
SHKBP1-207ENST00000595631 OR1B1Q8NGR6 318 aa10.24□□□□□ -0.77
SHKBP1-207ENST00000595631 PPP1R14BQ96C90 147 aa10.24□□□□□ -0.77
SHKBP1-207ENST00000595631 GGACTQ9BVM4 153 aa10.24□□□□□ -0.77
SHKBP1-207ENST00000595631 MED28Q9H204 178 aa10.24□□□□□ -0.77
SHKBP1-207ENST00000595631 K7EQG2 157 aa10.23□□□□□ -0.77
SHKBP1-207ENST00000595631 AGPAT2O15120 278 aa10.23□□□□□ -0.77
SHKBP1-207ENST00000595631 RLN2P04090 185 aa10.23□□□□□ -0.77
SHKBP1-207ENST00000595631 CD5P06127 495 aa10.23□□□□□ -0.77
SHKBP1-207ENST00000595631 PAFAH1B2P68402 229 aa10.23□□□□□ -0.77
SHKBP1-207ENST00000595631 DCANP1Q8TF63 244 aa10.23□□□□□ -0.77
SHKBP1-207ENST00000595631 TMEM147Q9BVK8 224 aa10.23□□□□□ -0.77
SHKBP1-207ENST00000595631 UQCC1Q9NVA1 299 aa10.23□□□□□ -0.77
SHKBP1-207ENST00000595631 MBD2Q9UBB5 411 aa10.23□□□□□ -0.77
SHKBP1-207ENST00000595631 HUWE1Q7Z6Z7 4374 aaKnown RBP10.22□□□□□ -0.77
SHKBP1-207ENST00000595631 HELTA6NFD8 242 aa10.22□□□□□ -0.77
SHKBP1-207ENST00000595631 CFDP00746 253 aaPredicted RBP10.22□□□□□ -0.77
SHKBP1-207ENST00000595631 S100A11P31949 105 aa10.22□□□□□ -0.77
SHKBP1-207ENST00000595631 DEFB131AP59861 70 aa10.22□□□□□ -0.77
SHKBP1-207ENST00000595631 VWC2Q2TAL6 325 aa10.22□□□□□ -0.77
SHKBP1-207ENST00000595631 LEMD1Q68G75 181 aa10.22□□□□□ -0.77
SHKBP1-207ENST00000595631 SCRT1Q9BWW7 348 aa10.22□□□□□ -0.77
SHKBP1-207ENST00000595631 RETNQ9HD89 108 aa10.22□□□□□ -0.77
SHKBP1-207ENST00000595631 SLC45A2Q9UMX9 530 aa10.22□□□□□ -0.77
SHKBP1-207ENST00000595631 WDR83OSQ9Y284 106 aa10.22□□□□□ -0.77
SHKBP1-207ENST00000595631 TRAV2A0A0B4J234 112 aa10.21□□□□□ -0.77
SHKBP1-207ENST00000595631 ZNF98A6NK75 572 aa10.21□□□□□ -0.77
SHKBP1-207ENST00000595631 OR5G3P0C626 314 aa10.21□□□□□ -0.77
SHKBP1-207ENST00000595631 ZNF688P0C7X2 276 aa10.21□□□□□ -0.77
SHKBP1-207ENST00000595631 NHLRC4P0CG21 123 aaPredicted RBP10.21□□□□□ -0.77
SHKBP1-207ENST00000595631 RPL35AP18077 110 aaKnown RBP10.21□□□□□ -0.77
SHKBP1-207ENST00000595631 SELENOTP62341 195 aa10.21□□□□□ -0.77
SHKBP1-207ENST00000595631 HBG1P69891 147 aa10.21□□□□□ -0.77
SHKBP1-207ENST00000595631 HBG2P69892 147 aa10.21□□□□□ -0.77
SHKBP1-207ENST00000595631 BAXQ07812 192 aa10.21□□□□□ -0.77
SHKBP1-207ENST00000595631 CLINT1Q14677 625 aa10.21□□□□□ -0.77
SHKBP1-207ENST00000595631 MIC13Q5XKP0 118 aa10.21□□□□□ -0.77
SHKBP1-207ENST00000595631 PATE2Q6UY27 113 aa10.21□□□□□ -0.77
SHKBP1-207ENST00000595631 ZNF546Q86UE3 836 aa10.21□□□□□ -0.77
SHKBP1-207ENST00000595631 OR5C1Q8NGR4 320 aa10.21□□□□□ -0.77
SHKBP1-207ENST00000595631 UHRF2Q96PU4 802 aa10.21□□□□□ -0.77
SHKBP1-207ENST00000595631 TM2D3Q9BRN9 247 aa10.21□□□□□ -0.77
SHKBP1-207ENST00000595631 GGTLC1Q9BX51 225 aa10.21□□□□□ -0.77
SHKBP1-207ENST00000595631 SLC25A31Q9H0C2 315 aa10.21□□□□□ -0.77
SHKBP1-207ENST00000595631 ARL6Q9H0F7 186 aa10.21□□□□□ -0.77
SHKBP1-207ENST00000595631 SLC25A32Q9H2D1 315 aa10.21□□□□□ -0.77
SHKBP1-207ENST00000595631 SLC25A22Q9H936 323 aa10.21□□□□□ -0.77
SHKBP1-207ENST00000595631 U3KQK5 164 aa10.21□□□□□ -0.77
SHKBP1-207ENST00000595631 H3BRN7 92 aa10.2□□□□□ -0.78
SHKBP1-207ENST00000595631 HYPMO75409 117 aa10.2□□□□□ -0.78
SHKBP1-207ENST00000595631 FGF7P21781 194 aa10.2□□□□□ -0.78
SHKBP1-207ENST00000595631 NUP62P37198 522 aaPredicted RBP10.2□□□□□ -0.78
SHKBP1-207ENST00000595631 CAMLGP49069 296 aa10.2□□□□□ -0.78
SHKBP1-207ENST00000595631 PLP1P60201 277 aa10.2□□□□□ -0.78
SHKBP1-207ENST00000595631 OR8I2Q8N0Y5 310 aa10.2□□□□□ -0.78
SHKBP1-207ENST00000595631 FAM110AQ9BQ89 295 aa10.2□□□□□ -0.78
SHKBP1-207ENST00000595631 SLC25A39Q9BZJ4 359 aaPredicted RBP10.2□□□□□ -0.78
SHKBP1-207ENST00000595631 PFDN2Q9UHV9 154 aa10.2□□□□□ -0.78
SHKBP1-207ENST00000595631 HIGD1AQ9Y241 93 aa10.2□□□□□ -0.78
SHKBP1-207ENST00000595631 LOC102724200A0A096LPH7 203 aaPredicted RBP10.19□□□□□ -0.78
SHKBP1-207ENST00000595631 PET100P0DJ07 73 aa10.19□□□□□ -0.78
SHKBP1-207ENST00000595631 AP2S1P53680 142 aaPredicted RBP10.19□□□□□ -0.78
SHKBP1-207ENST00000595631 OPCMLQ14982 345 aa10.19□□□□□ -0.78
SHKBP1-207ENST00000595631 ATP6V1FQ16864 119 aa10.19□□□□□ -0.78
SHKBP1-207ENST00000595631 Q5BKY6 102 aa10.19□□□□□ -0.78
SHKBP1-207ENST00000595631 C1orf194Q5T5A4 169 aa10.19□□□□□ -0.78
SHKBP1-207ENST00000595631 THAP6Q8TBB0 222 aa10.19□□□□□ -0.78
SHKBP1-207ENST00000595631 RCHY1Q96PM5 261 aa10.19□□□□□ -0.78
SHKBP1-207ENST00000595631 SHANK2-AS3Q9BTD1 123 aa10.19□□□□□ -0.78
SHKBP1-207ENST00000595631 SMIM3Q9BZL3 60 aa10.19□□□□□ -0.78
SHKBP1-207ENST00000595631 NRN1Q9NPD7 142 aa10.19□□□□□ -0.78
SHKBP1-207ENST00000595631 HSPB11Q9Y547 144 aa10.19□□□□□ -0.78
SHKBP1-207ENST00000595631 TENM3Q9P273 2699 aa10.18□□□□□ -0.78
SHKBP1-207ENST00000595631 LYL1P12980 280 aa10.18□□□□□ -0.78
SHKBP1-207ENST00000595631 RPL12P30050 165 aaKnown RBP10.18□□□□□ -0.78
SHKBP1-207ENST00000595631 RAP2BP61225 183 aa10.18□□□□□ -0.78
SHKBP1-207ENST00000595631 PRR20EP86478 221 aa10.18□□□□□ -0.78
SHKBP1-207ENST00000595631 PRR20CP86479 221 aa10.18□□□□□ -0.78
SHKBP1-207ENST00000595631 PRR20DP86480 221 aa10.18□□□□□ -0.78
SHKBP1-207ENST00000595631 PRR20BP86481 221 aa10.18□□□□□ -0.78
SHKBP1-207ENST00000595631 PRR20AP86496 221 aa10.18□□□□□ -0.78
SHKBP1-207ENST00000595631 PSMG4Q5JS54 123 aa10.18□□□□□ -0.78
SHKBP1-207ENST00000595631 MORN5Q5VZ52 161 aa10.18□□□□□ -0.78
SHKBP1-207ENST00000595631 C17orf77Q96MU5 243 aa10.18□□□□□ -0.78
SHKBP1-207ENST00000595631 ARV1Q9H2C2 271 aa10.18□□□□□ -0.78
SHKBP1-207ENST00000595631 FBXL17Q9UF56 701 aa10.18□□□□□ -0.78
SHKBP1-207ENST00000595631 KNCNA6PVL3 124 aa10.17□□□□□ -0.78
SHKBP1-207ENST00000595631 COX7A2P2O60397 106 aa10.17□□□□□ -0.78
SHKBP1-207ENST00000595631 CMC4P56277 68 aaPredicted RBP10.17□□□□□ -0.78
SHKBP1-207ENST00000595631 DEFB1P60022 68 aa10.17□□□□□ -0.78
SHKBP1-207ENST00000595631 RAB31Q13636 194 aa10.17□□□□□ -0.78
SHKBP1-207ENST00000595631 TMEM37Q8WXS4 190 aa10.17□□□□□ -0.78
SHKBP1-207ENST00000595631 SPATA25Q9BR10 227 aa10.17□□□□□ -0.78
SHKBP1-207ENST00000595631 RSG1Q9BU20 258 aa10.17□□□□□ -0.78
SHKBP1-207ENST00000595631 ZMAT4Q9H898 229 aa10.17□□□□□ -0.78
SHKBP1-207ENST00000595631 PXMP4Q9Y6I8 212 aa10.17□□□□□ -0.78
SHKBP1-207ENST00000595631 SOCS3O14543 225 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms